RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 SLC39A6Q13433 755 aa16.34■□□□□ 0.21
PMS1-204ENST00000409823 KAT6BQ8WYB5 2073 aa16.34■□□□□ 0.21
PMS1-204ENST00000409823 CHL1O00533 1208 aa16.34■□□□□ 0.21
PMS1-204ENST00000409823 SLC52A2Q9HAB3 445 aa16.34■□□□□ 0.21
PMS1-204ENST00000409823 LRRC37A3O60309 1634 aa16.33■□□□□ 0.2
PMS1-204ENST00000409823 NKX1-1Q15270 411 aaPredicted RBP16.33■□□□□ 0.2
PMS1-204ENST00000409823 PLEKHG2Q9H7P9 1386 aa16.33■□□□□ 0.2
PMS1-204ENST00000409823 WNK3Q9BYP7 1800 aa16.33■□□□□ 0.2
PMS1-204ENST00000409823 RBM6P78332 1123 aaKnown RBP16.32■□□□□ 0.2
PMS1-204ENST00000409823 TSPYL6Q8N831 410 aa16.32■□□□□ 0.2
PMS1-204ENST00000409823 ONECUT3O60422 494 aaPredicted RBP16.32■□□□□ 0.2
PMS1-204ENST00000409823 RXRBP28702 533 aa16.32■□□□□ 0.2
PMS1-204ENST00000409823 C8orf58Q8NAV2 365 aa16.32■□□□□ 0.2
PMS1-204ENST00000409823 PRIM1P49642 420 aaKnown RBP16.31■□□□□ 0.2
PMS1-204ENST00000409823 TCERG1O14776 1098 aaKnown RBP16.3■□□□□ 0.2
PMS1-204ENST00000409823 KCNQ2O43526 872 aa16.3■□□□□ 0.2
PMS1-204ENST00000409823 BCL2L13Q9BXK5 485 aa16.3■□□□□ 0.2
PMS1-204ENST00000409823 TMOD3Q9NYL9 352 aa16.29■□□□□ 0.2
PMS1-204ENST00000409823 ERVV-2B6SEH9 535 aa16.29■□□□□ 0.2
PMS1-204ENST00000409823 PIGBQ92521 554 aa16.29■□□□□ 0.2
PMS1-204ENST00000409823 SUPT16HQ9Y5B9 1047 aaKnown RBP16.29■□□□□ 0.2
PMS1-204ENST00000409823 PTF1AQ7RTS3 328 aa16.28■□□□□ 0.2
PMS1-204ENST00000409823 RCAN3Q9UKA8 241 aa16.28■□□□□ 0.2
PMS1-204ENST00000409823 THSD7AQ9UPZ6 1657 aa16.28■□□□□ 0.2
PMS1-204ENST00000409823 VIRMAQ69YN4 1812 aaKnown RBP16.27■□□□□ 0.2
PMS1-204ENST00000409823 ZNF790Q6PG37 636 aa16.27■□□□□ 0.2
PMS1-204ENST00000409823 NECTIN2Q92692 538 aa16.27■□□□□ 0.2
PMS1-204ENST00000409823 SCN11AQ9UI33 1791 aa16.27■□□□□ 0.2
PMS1-204ENST00000409823 PTCD1O75127 700 aaKnown RBP16.27■□□□□ 0.2
PMS1-204ENST00000409823 ASAP1Q9ULH1 1129 aa16.27■□□□□ 0.2
PMS1-204ENST00000409823 PRAMEF22A3QJZ6 481 aa16.26■□□□□ 0.19
PMS1-204ENST00000409823 TWISTNBQ3B726 338 aaPredicted RBP16.26■□□□□ 0.19
PMS1-204ENST00000409823 KRT27Q7Z3Y8 459 aa16.26■□□□□ 0.19
PMS1-204ENST00000409823 TOGARAM1Q9Y4F4 1720 aa16.26■□□□□ 0.19
PMS1-204ENST00000409823 BCAR3O75815 825 aa16.26■□□□□ 0.19
PMS1-204ENST00000409823 TTC5Q8N0Z6 440 aa16.26■□□□□ 0.19
PMS1-204ENST00000409823 ADAMTS7Q9UKP4 1686 aa16.25■□□□□ 0.19
PMS1-204ENST00000409823 EIF4A1P60842 406 aaKnown RBP16.25■□□□□ 0.19
PMS1-204ENST00000409823 ZNF496Q96IT1 587 aaPredicted RBP16.25■□□□□ 0.19
PMS1-204ENST00000409823 VAMP4O75379 141 aa16.24■□□□□ 0.19
PMS1-204ENST00000409823 PLIN1O60240 522 aa16.23■□□□□ 0.19
PMS1-204ENST00000409823 EIF2S2P20042 333 aaKnown RBP16.23■□□□□ 0.19
PMS1-204ENST00000409823 MRC1P22897 1456 aa16.23■□□□□ 0.19
PMS1-204ENST00000409823 IRX6P78412 446 aaPredicted RBP16.22■□□□□ 0.19
PMS1-204ENST00000409823 ATG3Q9NT62 314 aa16.22■□□□□ 0.19
PMS1-204ENST00000409823 BABAM1Q9NWV8 329 aa16.22■□□□□ 0.19
PMS1-204ENST00000409823 RGS12O14924 1447 aa16.22■□□□□ 0.19
PMS1-204ENST00000409823 RARSP54136 660 aaKnown RBP16.22■□□□□ 0.19
PMS1-204ENST00000409823 BCL9O00512 1426 aa16.22■□□□□ 0.19
PMS1-204ENST00000409823 DOT1LQ8TEK3 1739 aa16.22■□□□□ 0.19
PMS1-204ENST00000409823 SSH1Q8WYL5 1049 aa16.21■□□□□ 0.19
PMS1-204ENST00000409823 RBM42Q9BTD8 480 aaKnown RBP16.21■□□□□ 0.19
PMS1-204ENST00000409823 SIPA1L3O60292 1781 aaPredicted RBP16.21■□□□□ 0.19
PMS1-204ENST00000409823 SMC4Q9NTJ3 1288 aa16.21■□□□□ 0.18
PMS1-204ENST00000409823 GIGYF1O75420 1035 aaPredicted RBP16.2■□□□□ 0.18
PMS1-204ENST00000409823 FRAT1Q92837 279 aaPredicted RBP16.2■□□□□ 0.18
PMS1-204ENST00000409823 BRWD3Q6RI45 1802 aa16.2■□□□□ 0.18
PMS1-204ENST00000409823 TRIM37O94972 964 aa16.19■□□□□ 0.18
PMS1-204ENST00000409823 FMNL2Q96PY5 1086 aa16.19■□□□□ 0.18
PMS1-204ENST00000409823 ITGB4P16144 1822 aa16.19■□□□□ 0.18
PMS1-204ENST00000409823 PIP4K2AP48426 406 aaPredicted RBP16.19■□□□□ 0.18
PMS1-204ENST00000409823 KCNQ4P56696 695 aa16.18■□□□□ 0.18
PMS1-204ENST00000409823 HDGFL1Q5TGJ6 251 aa16.18■□□□□ 0.18
PMS1-204ENST00000409823 KDM3BQ7LBC6 1761 aa16.18■□□□□ 0.18
PMS1-204ENST00000409823 ANXA1P04083 346 aa16.18■□□□□ 0.18
PMS1-204ENST00000409823 USP16Q9Y5T5 823 aa16.18■□□□□ 0.18
PMS1-204ENST00000409823 FAM196AQ6ZSG2 479 aa16.17■□□□□ 0.18
PMS1-204ENST00000409823 SLC4A9Q96Q91 983 aa16.16■□□□□ 0.18
PMS1-204ENST00000409823 SNRPA1P09661 255 aaKnown RBP16.16■□□□□ 0.18
PMS1-204ENST00000409823 CT47B1P0C2W7 299 aaPredicted RBP16.16■□□□□ 0.18
PMS1-204ENST00000409823 SLC4A2P04920 1241 aa16.15■□□□□ 0.18
PMS1-204ENST00000409823 HEG1Q9ULI3 1381 aa16.15■□□□□ 0.18
PMS1-204ENST00000409823 CANXP27824 592 aaKnown RBP16.15■□□□□ 0.18
PMS1-204ENST00000409823 CHPF2Q9P2E5 772 aa16.15■□□□□ 0.18
PMS1-204ENST00000409823 TNNQ9UQP3 1299 aa16.15■□□□□ 0.18
PMS1-204ENST00000409823 RRP1P56182 461 aaKnown RBP16.15■□□□□ 0.18
PMS1-204ENST00000409823 KCPQ6ZWJ8 1503 aa16.14■□□□□ 0.17
PMS1-204ENST00000409823 NOB1Q9ULX3 412 aaKnown RBP16.14■□□□□ 0.17
PMS1-204ENST00000409823 PALLDQ8WX93 1383 aa16.14■□□□□ 0.17
PMS1-204ENST00000409823 PROSER3Q2NL68 480 aa16.14■□□□□ 0.17
PMS1-204ENST00000409823 C20orf194Q5TEA3 1177 aa16.14■□□□□ 0.17
PMS1-204ENST00000409823 CCDC30Q5VVM6 783 aa16.14■□□□□ 0.17
PMS1-204ENST00000409823 DNAJC10Q8IXB1 793 aa16.14■□□□□ 0.17
PMS1-204ENST00000409823 CLUAP1Q96AJ1 413 aa16.14■□□□□ 0.17
PMS1-204ENST00000409823 MYL6BP14649 208 aa16.13■□□□□ 0.17
PMS1-204ENST00000409823 G2E3Q7L622 706 aa16.13■□□□□ 0.17
PMS1-204ENST00000409823 MRPL50Q8N5N7 158 aaKnown RBP16.13■□□□□ 0.17
PMS1-204ENST00000409823 STK31Q9BXU1 1019 aa16.13■□□□□ 0.17
PMS1-204ENST00000409823 LOC102724428A0A0B4J2F2 783 aa16.12■□□□□ 0.17
PMS1-204ENST00000409823 ATP6V1AP38606 617 aa16.12■□□□□ 0.17
PMS1-204ENST00000409823 SIK1P57059 783 aa16.12■□□□□ 0.17
PMS1-204ENST00000409823 ALDH1L2Q3SY69 923 aa16.12■□□□□ 0.17
PMS1-204ENST00000409823 BCL11BQ9C0K0 894 aaPredicted RBP16.12■□□□□ 0.17
PMS1-204ENST00000409823 A1BGP04217 495 aa16.12■□□□□ 0.17
PMS1-204ENST00000409823 PHAXQ9H814 394 aaKnown RBP16.12■□□□□ 0.17
PMS1-204ENST00000409823 ZNF428Q96B54 188 aa16.11■□□□□ 0.17
PMS1-204ENST00000409823 ZNF330Q9Y3S2 320 aaPredicted RBP16.11■□□□□ 0.17
PMS1-204ENST00000409823 HOXB7P09629 217 aa16.1■□□□□ 0.17
PMS1-204ENST00000409823 PAPPAQ13219 1627 aa16.1■□□□□ 0.17
PMS1-204ENST00000409823 C5P01031 1676 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms