RNA–Protein interactions for RNA: ENST00000409583.5

ITGB6-202, Transcript of integrin subunit beta 6, humanhuman

TSL 3

Gene ITGB6, Length 4,500 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB6-202ENST00000409583 LRRFIP2Q9Y608 721 aaKnown RBP10.91□□□□□ -0.66
ITGB6-202ENST00000409583 PI4KAP2A4QPH2 592 aa10.9□□□□□ -0.66
ITGB6-202ENST00000409583 PI4KAP1Q8N8J0 262 aa10.9□□□□□ -0.66
ITGB6-202ENST00000409583 TIGD1Q96MW7 591 aa10.9□□□□□ -0.66
ITGB6-202ENST00000409583 ATP10AO60312 1499 aa10.9□□□□□ -0.66
ITGB6-202ENST00000409583 DYNC1I1O14576 645 aa10.9□□□□□ -0.66
ITGB6-202ENST00000409583 TRIM29Q14134 588 aa10.9□□□□□ -0.66
ITGB6-202ENST00000409583 DNAAF4Q8WXU2 420 aa10.9□□□□□ -0.66
ITGB6-202ENST00000409583 CCDC34Q96HJ3 373 aa10.9□□□□□ -0.66
ITGB6-202ENST00000409583 DBF4Q9UBU7 674 aaPredicted RBP10.9□□□□□ -0.66
ITGB6-202ENST00000409583 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.9□□□□□ -0.66
ITGB6-202ENST00000409583 ERICH2A1L162 156 aa10.9□□□□□ -0.66
ITGB6-202ENST00000409583 GCP02774 474 aa10.9□□□□□ -0.66
ITGB6-202ENST00000409583 LTKP29376 864 aa10.9□□□□□ -0.66
ITGB6-202ENST00000409583 CWC27Q6UX04 472 aaKnown RBP10.9□□□□□ -0.66
ITGB6-202ENST00000409583 CCDC39Q9UFE4 941 aa10.9□□□□□ -0.66
ITGB6-202ENST00000409583 SF3B2Q13435 895 aaKnown RBP10.9□□□□□ -0.67
ITGB6-202ENST00000409583 ALDH1L2Q3SY69 923 aa10.9□□□□□ -0.67
ITGB6-202ENST00000409583 LARP1Q6PKG0 1096 aaKnown RBP10.9□□□□□ -0.67
ITGB6-202ENST00000409583 DDX17Q92841 729 aaKnown RBP10.9□□□□□ -0.67
ITGB6-202ENST00000409583 ASXL1Q8IXJ9 1541 aa10.9□□□□□ -0.67
ITGB6-202ENST00000409583 TTC21AQ8NDW8 1320 aa10.89□□□□□ -0.67
ITGB6-202ENST00000409583 GPATCH11Q8N954 259 aa10.89□□□□□ -0.67
ITGB6-202ENST00000409583 CHMP4CQ96CF2 233 aa10.89□□□□□ -0.67
ITGB6-202ENST00000409583 MAP3K19Q56UN5 1328 aa10.89□□□□□ -0.67
ITGB6-202ENST00000409583 ZFP91Q96JP5 570 aaPredicted RBP10.89□□□□□ -0.67
ITGB6-202ENST00000409583 FMNL2Q96PY5 1086 aa10.89□□□□□ -0.67
ITGB6-202ENST00000409583 BCCIPQ9P287 314 aaKnown RBP eCLIP10.89□□□□□ -0.67
ITGB6-202ENST00000409583 LRPPRCP42704 1394 aaKnown RBP10.89□□□□□ -0.67
ITGB6-202ENST00000409583 ADGRL2O95490 1459 aa10.89□□□□□ -0.67
ITGB6-202ENST00000409583 A0A087WZG4 1122 aa10.89□□□□□ -0.67
ITGB6-202ENST00000409583 C8orf58Q8NAV2 365 aa10.89□□□□□ -0.67
ITGB6-202ENST00000409583 BICD2Q8TD16 824 aa10.89□□□□□ -0.67
ITGB6-202ENST00000409583 TNNQ9UQP3 1299 aa10.89□□□□□ -0.67
ITGB6-202ENST00000409583 PARD3Q8TEW0 1356 aa10.89□□□□□ -0.67
ITGB6-202ENST00000409583 PDCL2Q8N4E4 241 aa10.88□□□□□ -0.67
ITGB6-202ENST00000409583 ATP2B1P20020 1258 aa10.88□□□□□ -0.67
ITGB6-202ENST00000409583 MTHFSDQ2M296 383 aaKnown RBP10.88□□□□□ -0.67
ITGB6-202ENST00000409583 EYA1Q99502 592 aa10.88□□□□□ -0.67
ITGB6-202ENST00000409583 NPATQ14207 1427 aa10.88□□□□□ -0.67
ITGB6-202ENST00000409583 MBD5Q9P267 1494 aa10.88□□□□□ -0.67
ITGB6-202ENST00000409583 ERICH4A6NGS2 130 aa10.88□□□□□ -0.67
ITGB6-202ENST00000409583 ACSBG1Q96GR2 724 aa10.88□□□□□ -0.67
ITGB6-202ENST00000409583 PES1O00541 588 aaKnown RBP10.87□□□□□ -0.67
ITGB6-202ENST00000409583 CCDC8Q9H0W5 538 aaPredicted RBP10.87□□□□□ -0.67
ITGB6-202ENST00000409583 BOLA2Q9H3K6 86 aa10.87□□□□□ -0.67
ITGB6-202ENST00000409583 STK3Q13188 491 aa10.87□□□□□ -0.67
ITGB6-202ENST00000409583 SASS6Q6UVJ0 657 aa10.87□□□□□ -0.67
ITGB6-202ENST00000409583 TSPYL6Q8N831 410 aa10.87□□□□□ -0.67
ITGB6-202ENST00000409583 ABCF2Q9UG63 623 aa10.87□□□□□ -0.67
ITGB6-202ENST00000409583 IDH1O75874 414 aaKnown RBP10.87□□□□□ -0.67
ITGB6-202ENST00000409583 GTF2A1P52655 376 aaPredicted RBP10.87□□□□□ -0.67
ITGB6-202ENST00000409583 TSHZ3Q63HK5 1081 aa10.87□□□□□ -0.67
ITGB6-202ENST00000409583 UBE3BQ7Z3V4 1068 aa10.87□□□□□ -0.67
ITGB6-202ENST00000409583 MAP3K2Q9Y2U5 619 aa10.87□□□□□ -0.67
ITGB6-202ENST00000409583 ERCC6L2Q5T890 1561 aa10.87□□□□□ -0.67
ITGB6-202ENST00000409583 C8orf37Q96NL8 207 aa10.87□□□□□ -0.67
ITGB6-202ENST00000409583 METTL24Q5JXM2 366 aa10.86□□□□□ -0.67
ITGB6-202ENST00000409583 TRMT112Q9UI30 125 aaKnown RBP10.86□□□□□ -0.67
ITGB6-202ENST00000409583 ABCC1P33527 1531 aa10.86□□□□□ -0.67
ITGB6-202ENST00000409583 CCDC94Q9BW85 323 aaPredicted RBP10.86□□□□□ -0.67
ITGB6-202ENST00000409583 TOM1O60784 492 aa10.86□□□□□ -0.67
ITGB6-202ENST00000409583 CHPF2Q9P2E5 772 aa10.86□□□□□ -0.67
ITGB6-202ENST00000409583 KIF1BPQ96EK5 621 aa10.85□□□□□ -0.67
ITGB6-202ENST00000409583 ZCRB1Q8TBF4 217 aaKnown RBP10.85□□□□□ -0.67
ITGB6-202ENST00000409583 TRERF1Q96PN7 1200 aa10.85□□□□□ -0.67
ITGB6-202ENST00000409583 MEIS3Q99687 375 aa10.85□□□□□ -0.67
ITGB6-202ENST00000409583 PSMA5P28066 241 aa10.85□□□□□ -0.67
ITGB6-202ENST00000409583 NUCB2P80303 420 aa10.85□□□□□ -0.67
ITGB6-202ENST00000409583 UPF3BQ9BZI7 483 aaKnown RBP10.85□□□□□ -0.67
ITGB6-202ENST00000409583 MAST1Q9Y2H9 1570 aa10.85□□□□□ -0.67
ITGB6-202ENST00000409583 PLEKHH1Q9ULM0 1364 aa10.85□□□□□ -0.67
ITGB6-202ENST00000409583 BECN2A8MW95 431 aa10.85□□□□□ -0.67
ITGB6-202ENST00000409583 PHF14O94880 888 aa10.85□□□□□ -0.67
ITGB6-202ENST00000409583 IGHDP01880 384 aa10.85□□□□□ -0.67
ITGB6-202ENST00000409583 NFATC2IPQ8NCF5 419 aa10.85□□□□□ -0.67
ITGB6-202ENST00000409583 ABCA8O94911 1581 aa10.84□□□□□ -0.67
ITGB6-202ENST00000409583 ARHGEF12Q9NZN5 1544 aa10.84□□□□□ -0.67
ITGB6-202ENST00000409583 MX1P20591 662 aa10.84□□□□□ -0.67
ITGB6-202ENST00000409583 HYPKQ9NX55 129 aa10.84□□□□□ -0.67
ITGB6-202ENST00000409583 FLT4P35916 1363 aa10.84□□□□□ -0.67
ITGB6-202ENST00000409583 ZPR1O75312 459 aa10.84□□□□□ -0.67
ITGB6-202ENST00000409583 HMGB1P09429 215 aaKnown RBP10.84□□□□□ -0.67
ITGB6-202ENST00000409583 TPM4P67936 248 aa10.84□□□□□ -0.67
ITGB6-202ENST00000409583 GNL3LQ9NVN8 582 aaKnown RBP10.84□□□□□ -0.67
ITGB6-202ENST00000409583 HIP1O00291 1037 aa10.83□□□□□ -0.68
ITGB6-202ENST00000409583 TNNT1P13805 278 aa10.83□□□□□ -0.68
ITGB6-202ENST00000409583 IGHMBP2P38935 993 aaKnown RBP10.83□□□□□ -0.68
ITGB6-202ENST00000409583 ATP2B2Q01814 1243 aa10.83□□□□□ -0.68
ITGB6-202ENST00000409583 RABEP1Q15276 862 aa10.83□□□□□ -0.68
ITGB6-202ENST00000409583 CTDP1Q9Y5B0 961 aaPredicted RBP10.83□□□□□ -0.68
ITGB6-202ENST00000409583 IKQ13123 557 aaPredicted RBP10.83□□□□□ -0.68
ITGB6-202ENST00000409583 COPS6Q7L5N1 327 aa10.83□□□□□ -0.68
ITGB6-202ENST00000409583 LRP2BPQ9P2M1 347 aa10.83□□□□□ -0.68
ITGB6-202ENST00000409583 PCDHB15Q9Y5E8 787 aa10.83□□□□□ -0.68
ITGB6-202ENST00000409583 POLR3AO14802 1390 aaPredicted RBP10.83□□□□□ -0.68
ITGB6-202ENST00000409583 SNRPA1P09661 255 aaKnown RBP10.83□□□□□ -0.68
ITGB6-202ENST00000409583 ZNF526Q8TF50 670 aaPredicted RBP10.83□□□□□ -0.68
ITGB6-202ENST00000409583 RAI14Q9P0K7 980 aa10.83□□□□□ -0.68
ITGB6-202ENST00000409583 HOXC9P31274 260 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms