RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 SLC15A2Q16348 729 aa21.69■■□□□ 1.06
TSPAN4-208ENST00000409531 AKAP4Q5JQC9 854 aa21.69■■□□□ 1.06
TSPAN4-208ENST00000409531 SMARCC1Q92922 1105 aaPredicted RBP21.69■■□□□ 1.06
TSPAN4-208ENST00000409531 MAP3K5Q99683 1374 aa21.68■■□□□ 1.06
TSPAN4-208ENST00000409531 HNRNPUQ00839 825 aaKnown RBP eCLIP21.68■■□□□ 1.06
TSPAN4-208ENST00000409531 NEUROD2Q15784 382 aa21.68■■□□□ 1.06
TSPAN4-208ENST00000409531 GNAT3A8MTJ3 354 aa21.67■■□□□ 1.06
TSPAN4-208ENST00000409531 HTATSF1O43719 755 aaKnown RBP21.67■■□□□ 1.06
TSPAN4-208ENST00000409531 RTF1Q92541 710 aaKnown RBP21.67■■□□□ 1.06
TSPAN4-208ENST00000409531 CCNL1Q9UK58 526 aaPredicted RBP21.67■■□□□ 1.06
TSPAN4-208ENST00000409531 HMGB2P26583 209 aaKnown RBP21.66■■□□□ 1.06
TSPAN4-208ENST00000409531 KCNQ4P56696 695 aa21.66■■□□□ 1.06
TSPAN4-208ENST00000409531 CCDC27Q2M243 656 aa21.66■■□□□ 1.06
TSPAN4-208ENST00000409531 RRP7AQ9Y3A4 280 aaKnown RBP21.66■■□□□ 1.06
TSPAN4-208ENST00000409531 CABP4P57796 275 aa21.65■■□□□ 1.06
TSPAN4-208ENST00000409531 PALLDQ8WX93 1383 aa21.65■■□□□ 1.06
TSPAN4-208ENST00000409531 TOGARAM1Q9Y4F4 1720 aa21.64■■□□□ 1.06
TSPAN4-208ENST00000409531 SCN11AQ9UI33 1791 aa21.64■■□□□ 1.06
TSPAN4-208ENST00000409531 ASAP1Q9ULH1 1129 aa21.64■■□□□ 1.05
TSPAN4-208ENST00000409531 ITGB4P16144 1822 aa21.63■■□□□ 1.05
TSPAN4-208ENST00000409531 ATG3Q9NT62 314 aa21.63■■□□□ 1.05
TSPAN4-208ENST00000409531 KDM6AO15550 1401 aaPredicted RBP21.63■■□□□ 1.05
TSPAN4-208ENST00000409531 NFATC2IPQ8NCF5 419 aa21.62■■□□□ 1.05
TSPAN4-208ENST00000409531 AKT1S1Q96B36 256 aa21.62■■□□□ 1.05
TSPAN4-208ENST00000409531 ADAMTS7Q9UKP4 1686 aa21.62■■□□□ 1.05
TSPAN4-208ENST00000409531 LGR6Q9HBX8 967 aa21.61■■□□□ 1.05
TSPAN4-208ENST00000409531 SALL2Q9Y467 1007 aaPredicted RBP21.61■■□□□ 1.05
TSPAN4-208ENST00000409531 RNMTO43148 476 aaKnown RBP21.6■■□□□ 1.05
TSPAN4-208ENST00000409531 CALD1Q05682 793 aaKnown RBP21.6■■□□□ 1.05
TSPAN4-208ENST00000409531 ZNF827Q17R98 1081 aa21.6■■□□□ 1.05
TSPAN4-208ENST00000409531 TRIM35Q9UPQ4 493 aa21.6■■□□□ 1.05
TSPAN4-208ENST00000409531 LY75O60449 1722 aa21.6■■□□□ 1.05
TSPAN4-208ENST00000409531 SENP3-EIF4A1A0A087X0R7 540 aa21.59■■□□□ 1.05
TSPAN4-208ENST00000409531 LOC102724428A0A0B4J2F2 783 aa21.59■■□□□ 1.05
TSPAN4-208ENST00000409531 SIK1P57059 783 aa21.59■■□□□ 1.05
TSPAN4-208ENST00000409531 ZBED9Q6R2W3 1325 aa21.59■■□□□ 1.05
TSPAN4-208ENST00000409531 WWC1Q8IX03 1113 aa21.59■■□□□ 1.05
TSPAN4-208ENST00000409531 YTHDC1Q96MU7 727 aaKnown RBP21.59■■□□□ 1.05
TSPAN4-208ENST00000409531 PDGFDQ9GZP0 370 aaPredicted RBP21.58■■□□□ 1.05
TSPAN4-208ENST00000409531 CEMIPQ8WUJ3 1361 aa21.58■■□□□ 1.04
TSPAN4-208ENST00000409531 SLC52A2Q9HAB3 445 aa21.57■■□□□ 1.04
TSPAN4-208ENST00000409531 TFCP2L1Q9NZI6 479 aa21.57■■□□□ 1.04
TSPAN4-208ENST00000409531 MCM10Q7L590 875 aa21.56■■□□□ 1.04
TSPAN4-208ENST00000409531 WDR63Q8IWG1 891 aa21.56■■□□□ 1.04
TSPAN4-208ENST00000409531 SPON1Q9HCB6 807 aa21.56■■□□□ 1.04
TSPAN4-208ENST00000409531 PAPPAQ13219 1627 aa21.56■■□□□ 1.04
TSPAN4-208ENST00000409531 ATP6V1AP38606 617 aa21.55■■□□□ 1.04
TSPAN4-208ENST00000409531 DCTN1Q14203 1278 aa21.55■■□□□ 1.04
TSPAN4-208ENST00000409531 IL17REQ8NFR9 667 aa21.55■■□□□ 1.04
TSPAN4-208ENST00000409531 ZNF521Q96K83 1311 aa21.55■■□□□ 1.04
TSPAN4-208ENST00000409531 TEFQ10587 303 aa21.55■■□□□ 1.04
TSPAN4-208ENST00000409531 SIPA1L3O60292 1781 aaPredicted RBP21.54■■□□□ 1.04
TSPAN4-208ENST00000409531 RBM42Q9BTD8 480 aaKnown RBP21.54■■□□□ 1.04
TSPAN4-208ENST00000409531 MRC1P22897 1456 aa21.54■■□□□ 1.04
TSPAN4-208ENST00000409531 IL16Q14005 1332 aa21.53■■□□□ 1.04
TSPAN4-208ENST00000409531 YY1P25490 414 aa21.53■■□□□ 1.04
TSPAN4-208ENST00000409531 ZBTB7AO95365 584 aa21.52■■□□□ 1.03
TSPAN4-208ENST00000409531 GOLGA2Q08379 1002 aa21.52■■□□□ 1.03
TSPAN4-208ENST00000409531 ITPK1Q13572 414 aa21.52■■□□□ 1.03
TSPAN4-208ENST00000409531 THUMPD2Q9BTF0 503 aaKnown RBP21.52■■□□□ 1.03
TSPAN4-208ENST00000409531 PNPLA7Q6ZV29 1317 aa21.51■■□□□ 1.03
TSPAN4-208ENST00000409531 PTCD1O75127 700 aaKnown RBP21.51■■□□□ 1.03
TSPAN4-208ENST00000409531 SLC16A10Q8TF71 515 aa21.51■■□□□ 1.03
TSPAN4-208ENST00000409531 SLC4A9Q96Q91 983 aa21.51■■□□□ 1.03
TSPAN4-208ENST00000409531 MTFR1LQ9H019 292 aa21.51■■□□□ 1.03
TSPAN4-208ENST00000409531 GNAI1P63096 354 aa21.5■■□□□ 1.03
TSPAN4-208ENST00000409531 TAF7Q15545 349 aaPredicted RBP21.5■■□□□ 1.03
TSPAN4-208ENST00000409531 LINC00116Q8NCU8 138 aa21.5■■□□□ 1.03
TSPAN4-208ENST00000409531 BABAM1Q9NWV8 329 aa21.5■■□□□ 1.03
TSPAN4-208ENST00000409531 ATF5Q9Y2D1 282 aaPredicted RBP21.5■■□□□ 1.03
TSPAN4-208ENST00000409531 FLAD1Q8NFF5 587 aa21.49■■□□□ 1.03
TSPAN4-208ENST00000409531 AK7Q96M32 723 aa21.49■■□□□ 1.03
TSPAN4-208ENST00000409531 IFT57Q9NWB7 429 aa21.49■■□□□ 1.03
TSPAN4-208ENST00000409531 SLC39A6Q13433 755 aa21.48■■□□□ 1.03
TSPAN4-208ENST00000409531 COL23A1Q86Y22 540 aaPredicted RBP21.48■■□□□ 1.03
TSPAN4-208ENST00000409531 CFAP44Q96MT7 982 aa21.48■■□□□ 1.03
TSPAN4-208ENST00000409531 CASZ1Q86V15 1759 aa21.48■■□□□ 1.03
TSPAN4-208ENST00000409531 E9PSI1 815 aa21.47■■□□□ 1.03
TSPAN4-208ENST00000409531 MYH16Q9H6N6 1097 aa21.47■■□□□ 1.03
TSPAN4-208ENST00000409531 MSH5O43196 834 aa21.46■■□□□ 1.03
TSPAN4-208ENST00000409531 LAS1LQ9Y4W2 734 aaKnown RBP21.46■■□□□ 1.03
TSPAN4-208ENST00000409531 KDM3BQ7LBC6 1761 aa21.46■■□□□ 1.03
TSPAN4-208ENST00000409531 C5P01031 1676 aa21.45■■□□□ 1.02
TSPAN4-208ENST00000409531 TAF1LQ8IZX4 1826 aa21.45■■□□□ 1.02
TSPAN4-208ENST00000409531 BTBD11A6QL63 1104 aa21.45■■□□□ 1.02
TSPAN4-208ENST00000409531 ZNF853P0CG23 659 aa21.45■■□□□ 1.02
TSPAN4-208ENST00000409531 PTGER2P43116 358 aa21.45■■□□□ 1.02
TSPAN4-208ENST00000409531 RC3H1Q5TC82 1133 aaKnown RBP21.45■■□□□ 1.02
TSPAN4-208ENST00000409531 CHL1O00533 1208 aa21.44■■□□□ 1.02
TSPAN4-208ENST00000409531 PPP1R1BQ9UD71 204 aaPredicted RBP21.44■■□□□ 1.02
TSPAN4-208ENST00000409531 TSPYL4Q9UJ04 414 aa21.44■■□□□ 1.02
TSPAN4-208ENST00000409531 C4BP0C0L5 1744 aa21.43■■□□□ 1.02
TSPAN4-208ENST00000409531 SSFA2P28290 1259 aa21.43■■□□□ 1.02
TSPAN4-208ENST00000409531 SLFN5Q08AF3 891 aa21.43■■□□□ 1.02
TSPAN4-208ENST00000409531 TTC5Q8N0Z6 440 aa21.43■■□□□ 1.02
TSPAN4-208ENST00000409531 QSER1Q2KHR3 1735 aa21.42■■□□□ 1.02
TSPAN4-208ENST00000409531 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.42■■□□□ 1.02
TSPAN4-208ENST00000409531 GNPATO15228 680 aa21.42■■□□□ 1.02
TSPAN4-208ENST00000409531 ZNF790Q6PG37 636 aa21.42■■□□□ 1.02
TSPAN4-208ENST00000409531 AMIGO3Q86WK7 504 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms