RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 FKBP5Q13451 457 aaPredicted RBP18.95■□□□□ 0.62
SCAMP4-202ENST00000409472 GLIPR1L2Q4G1C9 344 aa18.95■□□□□ 0.62
SCAMP4-202ENST00000409472 PLEKHM2Q8IWE5 1019 aa18.95■□□□□ 0.62
SCAMP4-202ENST00000409472 KRT28Q7Z3Y7 464 aa18.94■□□□□ 0.62
SCAMP4-202ENST00000409472 FRAT2O75474 233 aaPredicted RBP18.93■□□□□ 0.62
SCAMP4-202ENST00000409472 SPRYD3Q8NCJ5 442 aa18.93■□□□□ 0.62
SCAMP4-202ENST00000409472 BECN1Q14457 450 aa18.93■□□□□ 0.62
SCAMP4-202ENST00000409472 CCDC30Q5VVM6 783 aa18.93■□□□□ 0.62
SCAMP4-202ENST00000409472 MPRIPQ6WCQ1 1025 aa18.93■□□□□ 0.62
SCAMP4-202ENST00000409472 TBC1D9Q6ZT07 1266 aa18.93■□□□□ 0.62
SCAMP4-202ENST00000409472 ALS2Q96Q42 1657 aa18.93■□□□□ 0.62
SCAMP4-202ENST00000409472 KIF1AQ12756 1690 aa18.92■□□□□ 0.62
SCAMP4-202ENST00000409472 ZNF530Q6P9A1 599 aaPredicted RBP18.92■□□□□ 0.62
SCAMP4-202ENST00000409472 ANKRD24Q8TF21 1146 aa18.92■□□□□ 0.62
SCAMP4-202ENST00000409472 PHAXQ9H814 394 aaKnown RBP18.92■□□□□ 0.62
SCAMP4-202ENST00000409472 RPAP2Q8IXW5 612 aaPredicted RBP18.92■□□□□ 0.62
SCAMP4-202ENST00000409472 TMEM94Q12767 1356 aa18.92■□□□□ 0.62
SCAMP4-202ENST00000409472 N4BP2Q86UW6 1770 aaPredicted RBP18.91■□□□□ 0.62
SCAMP4-202ENST00000409472 MST1RQ04912 1400 aa18.91■□□□□ 0.62
SCAMP4-202ENST00000409472 NCAPD2Q15021 1401 aa18.91■□□□□ 0.62
SCAMP4-202ENST00000409472 CAMTA1Q9Y6Y1 1673 aa18.91■□□□□ 0.62
SCAMP4-202ENST00000409472 CCT4P50991 539 aaKnown RBP18.91■□□□□ 0.62
SCAMP4-202ENST00000409472 HDGFL1Q5TGJ6 251 aa18.91■□□□□ 0.62
SCAMP4-202ENST00000409472 ANTXR1Q9H6X2 564 aa18.91■□□□□ 0.62
SCAMP4-202ENST00000409472 ZC3H6P61129 1189 aaKnown RBP18.9■□□□□ 0.62
SCAMP4-202ENST00000409472 C19orf44Q9H6X5 657 aa18.9■□□□□ 0.62
SCAMP4-202ENST00000409472 BRPF3Q9ULD4 1205 aa18.9■□□□□ 0.62
SCAMP4-202ENST00000409472 CACNA1FO60840 1977 aa18.89■□□□□ 0.62
SCAMP4-202ENST00000409472 EIF2S2P20042 333 aaKnown RBP18.89■□□□□ 0.61
SCAMP4-202ENST00000409472 ANXA1P04083 346 aa18.89■□□□□ 0.61
SCAMP4-202ENST00000409472 HSPA2P54652 639 aa18.89■□□□□ 0.61
SCAMP4-202ENST00000409472 EIF4A1P60842 406 aaKnown RBP18.89■□□□□ 0.61
SCAMP4-202ENST00000409472 GSE1Q14687 1217 aa18.89■□□□□ 0.61
SCAMP4-202ENST00000409472 TTC22Q5TAA0 569 aa18.88■□□□□ 0.61
SCAMP4-202ENST00000409472 PNMA6EA0A0J9YXQ4 647 aa18.87■□□□□ 0.61
SCAMP4-202ENST00000409472 RBM25P49756 843 aaKnown RBP18.87■□□□□ 0.61
SCAMP4-202ENST00000409472 EXOC6BQ9Y2D4 811 aa18.87■□□□□ 0.61
SCAMP4-202ENST00000409472 AKAP4Q5JQC9 854 aa18.86■□□□□ 0.61
SCAMP4-202ENST00000409472 KIF2CQ99661 725 aa18.86■□□□□ 0.61
SCAMP4-202ENST00000409472 BABAM1Q9NWV8 329 aa18.86■□□□□ 0.61
SCAMP4-202ENST00000409472 CHPF2Q9P2E5 772 aa18.86■□□□□ 0.61
SCAMP4-202ENST00000409472 CABLES1Q8TDN4 633 aa18.86■□□□□ 0.61
SCAMP4-202ENST00000409472 ERBB3P21860 1342 aa18.85■□□□□ 0.61
SCAMP4-202ENST00000409472 PRAMEF22A3QJZ6 481 aa18.85■□□□□ 0.61
SCAMP4-202ENST00000409472 GNAI2P04899 355 aa18.85■□□□□ 0.61
SCAMP4-202ENST00000409472 TEFQ10587 303 aa18.85■□□□□ 0.61
SCAMP4-202ENST00000409472 PLEKHO1Q53GL0 409 aaPredicted RBP18.85■□□□□ 0.61
SCAMP4-202ENST00000409472 TSHZ3Q63HK5 1081 aa18.85■□□□□ 0.61
SCAMP4-202ENST00000409472 LRRFIP2Q9Y608 721 aaKnown RBP18.85■□□□□ 0.61
SCAMP4-202ENST00000409472 BTBD11A6QL63 1104 aa18.84■□□□□ 0.61
SCAMP4-202ENST00000409472 CDC45O75419 566 aa18.84■□□□□ 0.61
SCAMP4-202ENST00000409472 RNMTO43148 476 aaKnown RBP18.84■□□□□ 0.61
SCAMP4-202ENST00000409472 PXDNLA1KZ92 1463 aa18.84■□□□□ 0.61
SCAMP4-202ENST00000409472 CD2BP2O95400 341 aaKnown RBP18.83■□□□□ 0.61
SCAMP4-202ENST00000409472 USP44Q9H0E7 712 aa18.83■□□□□ 0.61
SCAMP4-202ENST00000409472 SIPA1L3O60292 1781 aaPredicted RBP18.83■□□□□ 0.6
SCAMP4-202ENST00000409472 ATF3P18847 181 aa18.83■□□□□ 0.6
SCAMP4-202ENST00000409472 RBM42Q9BTD8 480 aaKnown RBP18.83■□□□□ 0.6
SCAMP4-202ENST00000409472 CRYBG1Q9Y4K1 1723 aa18.82■□□□□ 0.6
SCAMP4-202ENST00000409472 SOS1Q07889 1333 aaPredicted RBP18.82■□□□□ 0.6
SCAMP4-202ENST00000409472 SDSP20132 328 aa18.82■□□□□ 0.6
SCAMP4-202ENST00000409472 C1orf141Q5JVX7 400 aa18.82■□□□□ 0.6
SCAMP4-202ENST00000409472 FAM43AQ8N2R8 423 aa18.82■□□□□ 0.6
SCAMP4-202ENST00000409472 KDM4FA0A1W2PPD8 638 aa18.81■□□□□ 0.6
SCAMP4-202ENST00000409472 HMMRO75330 724 aa18.81■□□□□ 0.6
SCAMP4-202ENST00000409472 PROSER3Q2NL68 480 aa18.81■□□□□ 0.6
SCAMP4-202ENST00000409472 AMOTQ4VCS5 1084 aa18.81■□□□□ 0.6
SCAMP4-202ENST00000409472 XIRP1Q702N8 1843 aaKnown RBP18.81■□□□□ 0.6
SCAMP4-202ENST00000409472 COL18A1P39060 1754 aa18.8■□□□□ 0.6
SCAMP4-202ENST00000409472 MEGF6O75095 1541 aa18.8■□□□□ 0.6
SCAMP4-202ENST00000409472 CHRNA2Q15822 529 aa18.79■□□□□ 0.6
SCAMP4-202ENST00000409472 TUBGCP6Q96RT7 1819 aa18.79■□□□□ 0.6
SCAMP4-202ENST00000409472 ADCY9O60503 1353 aa18.79■□□□□ 0.6
SCAMP4-202ENST00000409472 GNAI3P08754 354 aa18.79■□□□□ 0.6
SCAMP4-202ENST00000409472 ADAMTS7Q9UKP4 1686 aa18.79■□□□□ 0.6
SCAMP4-202ENST00000409472 PI4KAP2A4QPH2 592 aa18.78■□□□□ 0.6
SCAMP4-202ENST00000409472 PI4KAP1Q8N8J0 262 aa18.78■□□□□ 0.6
SCAMP4-202ENST00000409472 NBPF7P0C2Y1 421 aaPredicted RBP18.78■□□□□ 0.6
SCAMP4-202ENST00000409472 NLRP2Q9NX02 1062 aa18.78■□□□□ 0.6
SCAMP4-202ENST00000409472 ATP8B2P98198 1209 aa18.77■□□□□ 0.6
SCAMP4-202ENST00000409472 HSCBQ8IWL3 235 aa18.77■□□□□ 0.6
SCAMP4-202ENST00000409472 SALL3Q9BXA9 1300 aa18.77■□□□□ 0.6
SCAMP4-202ENST00000409472 KDM6AO15550 1401 aaPredicted RBP18.77■□□□□ 0.6
SCAMP4-202ENST00000409472 DCCP43146 1447 aa18.77■□□□□ 0.6
SCAMP4-202ENST00000409472 UBTFL1P0CB47 393 aaPredicted RBP18.77■□□□□ 0.6
SCAMP4-202ENST00000409472 PDE1AP54750 535 aa18.77■□□□□ 0.6
SCAMP4-202ENST00000409472 IBTKQ9P2D0 1353 aaPredicted RBP18.77■□□□□ 0.59
SCAMP4-202ENST00000409472 NCOA3Q9Y6Q9 1424 aa18.77■□□□□ 0.59
SCAMP4-202ENST00000409472 C5P01031 1676 aa18.76■□□□□ 0.59
SCAMP4-202ENST00000409472 HOXB7P09629 217 aa18.76■□□□□ 0.59
SCAMP4-202ENST00000409472 SRCIN1Q9C0H9 1055 aa18.76■□□□□ 0.59
SCAMP4-202ENST00000409472 OVOS2A0A0G2JMS6 1433 aa18.76■□□□□ 0.59
SCAMP4-202ENST00000409472 TNS3Q68CZ2 1445 aa18.76■□□□□ 0.59
SCAMP4-202ENST00000409472 GIGYF1O75420 1035 aaPredicted RBP18.75■□□□□ 0.59
SCAMP4-202ENST00000409472 BEND3Q5T5X7 828 aa18.75■□□□□ 0.59
SCAMP4-202ENST00000409472 HEG1Q9ULI3 1381 aa18.75■□□□□ 0.59
SCAMP4-202ENST00000409472 SLC39A6Q13433 755 aa18.75■□□□□ 0.59
SCAMP4-202ENST00000409472 DNAAF4Q8WXU2 420 aa18.75■□□□□ 0.59
SCAMP4-202ENST00000409472 LRRCC1Q9C099 1032 aa18.74■□□□□ 0.59
SCAMP4-202ENST00000409472 SCN11AQ9UI33 1791 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms