RNA–Protein interactions for RNA: ENST00000409375.1

AP1S3-204, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 3 BASIC

Gene AP1S3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-204ENST00000409375 SLFN5Q08AF3 891 aa19.84■□□□□ 0.77
AP1S3-204ENST00000409375 FAM196AQ6ZSG2 479 aa19.84■□□□□ 0.77
AP1S3-204ENST00000409375 SIPA1L3O60292 1781 aaPredicted RBP19.84■□□□□ 0.77
AP1S3-204ENST00000409375 TOGARAM1Q9Y4F4 1720 aa19.83■□□□□ 0.77
AP1S3-204ENST00000409375 BTBD11A6QL63 1104 aa19.83■□□□□ 0.77
AP1S3-204ENST00000409375 NFATC2IPQ8NCF5 419 aa19.83■□□□□ 0.77
AP1S3-204ENST00000409375 SYTL4Q96C24 671 aaPredicted RBP19.83■□□□□ 0.77
AP1S3-204ENST00000409375 TSPYL4Q9UJ04 414 aa19.83■□□□□ 0.77
AP1S3-204ENST00000409375 ITGB4P16144 1822 aa19.82■□□□□ 0.76
AP1S3-204ENST00000409375 CHL1O00533 1208 aa19.82■□□□□ 0.76
AP1S3-204ENST00000409375 ZNF853P0CG23 659 aa19.82■□□□□ 0.76
AP1S3-204ENST00000409375 CENPBP07199 599 aaPredicted RBP19.81■□□□□ 0.76
AP1S3-204ENST00000409375 TTC5Q8N0Z6 440 aa19.81■□□□□ 0.76
AP1S3-204ENST00000409375 CDCA7LQ96GN5 454 aa19.8■□□□□ 0.76
AP1S3-204ENST00000409375 FANCIQ9NVI1 1328 aa19.79■□□□□ 0.76
AP1S3-204ENST00000409375 NHSQ6T4R5 1651 aa19.79■□□□□ 0.76
AP1S3-204ENST00000409375 PRIM1P49642 420 aaKnown RBP19.79■□□□□ 0.76
AP1S3-204ENST00000409375 ACSBG1Q96GR2 724 aa19.79■□□□□ 0.76
AP1S3-204ENST00000409375 MBIPQ9NS73 344 aa19.79■□□□□ 0.76
AP1S3-204ENST00000409375 KDM3BQ7LBC6 1761 aa19.79■□□□□ 0.76
AP1S3-204ENST00000409375 TRMT2AQ8IZ69 625 aaKnown RBP19.78■□□□□ 0.76
AP1S3-204ENST00000409375 SPINK5Q9NQ38 1064 aaPredicted RBP19.78■□□□□ 0.76
AP1S3-204ENST00000409375 DUSP27Q5VZP5 1158 aa19.77■□□□□ 0.76
AP1S3-204ENST00000409375 ZNF790Q6PG37 636 aa19.77■□□□□ 0.76
AP1S3-204ENST00000409375 TSR2Q969E8 191 aaKnown RBP19.77■□□□□ 0.76
AP1S3-204ENST00000409375 SBF2Q86WG5 1849 aa19.76■□□□□ 0.75
AP1S3-204ENST00000409375 CT47B1P0C2W7 299 aaPredicted RBP19.76■□□□□ 0.75
AP1S3-204ENST00000409375 PIGBQ92521 554 aa19.76■□□□□ 0.75
AP1S3-204ENST00000409375 SMARCC1Q92922 1105 aaPredicted RBP19.76■□□□□ 0.75
AP1S3-204ENST00000409375 CHMP4AQ9BY43 222 aa19.76■□□□□ 0.75
AP1S3-204ENST00000409375 MIS18AQ9NYP9 233 aa19.76■□□□□ 0.75
AP1S3-204ENST00000409375 FAM182BQ5T319 152 aa19.75■□□□□ 0.75
AP1S3-204ENST00000409375 PAPPAQ13219 1627 aa19.75■□□□□ 0.75
AP1S3-204ENST00000409375 SOS1Q07889 1333 aaPredicted RBP19.75■□□□□ 0.75
AP1S3-204ENST00000409375 FMNL2Q96PY5 1086 aa19.74■□□□□ 0.75
AP1S3-204ENST00000409375 BCL11BQ9C0K0 894 aaPredicted RBP19.74■□□□□ 0.75
AP1S3-204ENST00000409375 EXOSC9Q06265 439 aaKnown RBP19.72■□□□□ 0.75
AP1S3-204ENST00000409375 UBR2Q8IWV8 1755 aa19.71■□□□□ 0.75
AP1S3-204ENST00000409375 KCNQ2O43526 872 aa19.71■□□□□ 0.75
AP1S3-204ENST00000409375 HOXB7P09629 217 aa19.71■□□□□ 0.75
AP1S3-204ENST00000409375 EIF4A1P60842 406 aaKnown RBP19.71■□□□□ 0.75
AP1S3-204ENST00000409375 SLC39A6Q13433 755 aa19.71■□□□□ 0.75
AP1S3-204ENST00000409375 ZNF428Q96B54 188 aa19.71■□□□□ 0.75
AP1S3-204ENST00000409375 BTAF1O14981 1849 aa19.71■□□□□ 0.75
AP1S3-204ENST00000409375 TWISTNBQ3B726 338 aaPredicted RBP19.69■□□□□ 0.74
AP1S3-204ENST00000409375 ATG3Q9NT62 314 aa19.69■□□□□ 0.74
AP1S3-204ENST00000409375 ASAP1Q9ULH1 1129 aa19.69■□□□□ 0.74
AP1S3-204ENST00000409375 PALLDQ8WX93 1383 aa19.69■□□□□ 0.74
AP1S3-204ENST00000409375 TRIM37O94972 964 aa19.68■□□□□ 0.74
AP1S3-204ENST00000409375 SNRPA1P09661 255 aaKnown RBP19.68■□□□□ 0.74
AP1S3-204ENST00000409375 HMGB2P26583 209 aaKnown RBP19.68■□□□□ 0.74
AP1S3-204ENST00000409375 VSIG10Q8N0Z9 540 aa19.68■□□□□ 0.74
AP1S3-204ENST00000409375 ZNF496Q96IT1 587 aaPredicted RBP19.68■□□□□ 0.74
AP1S3-204ENST00000409375 TEX13AQ9BXU3 409 aaPredicted RBP19.68■□□□□ 0.74
AP1S3-204ENST00000409375 HEG1Q9ULI3 1381 aa19.68■□□□□ 0.74
AP1S3-204ENST00000409375 KCPQ6ZWJ8 1503 aa19.67■□□□□ 0.74
AP1S3-204ENST00000409375 KCNQ3O43525 872 aa19.67■□□□□ 0.74
AP1S3-204ENST00000409375 PTCD1O75127 700 aaKnown RBP19.67■□□□□ 0.74
AP1S3-204ENST00000409375 RBM42Q9BTD8 480 aaKnown RBP19.67■□□□□ 0.74
AP1S3-204ENST00000409375 C8orf58Q8NAV2 365 aa19.66■□□□□ 0.74
AP1S3-204ENST00000409375 ELL2O00472 640 aaPredicted RBP19.65■□□□□ 0.74
AP1S3-204ENST00000409375 SF3B2Q13435 895 aaKnown RBP19.65■□□□□ 0.74
AP1S3-204ENST00000409375 GIGYF1O75420 1035 aaPredicted RBP19.64■□□□□ 0.73
AP1S3-204ENST00000409375 LAMB4A4D0S4 1761 aa19.63■□□□□ 0.73
AP1S3-204ENST00000409375 ZNF831Q5JPB2 1677 aa19.63■□□□□ 0.73
AP1S3-204ENST00000409375 CCDC30Q5VVM6 783 aa19.63■□□□□ 0.73
AP1S3-204ENST00000409375 LOC102724428A0A0B4J2F2 783 aa19.62■□□□□ 0.73
AP1S3-204ENST00000409375 VAMP4O75379 141 aa19.62■□□□□ 0.73
AP1S3-204ENST00000409375 SIK1P57059 783 aa19.62■□□□□ 0.73
AP1S3-204ENST00000409375 KRT24Q2M2I5 525 aa19.62■□□□□ 0.73
AP1S3-204ENST00000409375 ALDH1L2Q3SY69 923 aa19.62■□□□□ 0.73
AP1S3-204ENST00000409375 HDGFL1Q5TGJ6 251 aa19.62■□□□□ 0.73
AP1S3-204ENST00000409375 TSPYL6Q8N831 410 aa19.62■□□□□ 0.73
AP1S3-204ENST00000409375 STK31Q9BXU1 1019 aa19.62■□□□□ 0.73
AP1S3-204ENST00000409375 RCAN3Q9UKA8 241 aa19.62■□□□□ 0.73
AP1S3-204ENST00000409375 CICQ96RK0 1608 aaPredicted RBP19.62■□□□□ 0.73
AP1S3-204ENST00000409375 STARD3NLO95772 234 aa19.61■□□□□ 0.73
AP1S3-204ENST00000409375 ATP6V1AP38606 617 aa19.61■□□□□ 0.73
AP1S3-204ENST00000409375 LY75O60449 1722 aa19.61■□□□□ 0.73
AP1S3-204ENST00000409375 APBA3O96018 575 aa19.6■□□□□ 0.73
AP1S3-204ENST00000409375 PTF1AQ7RTS3 328 aa19.6■□□□□ 0.73
AP1S3-204ENST00000409375 CCDC125Q86Z20 511 aa19.6■□□□□ 0.73
AP1S3-204ENST00000409375 TNS1Q9HBL0 1735 aaKnown RBP19.59■□□□□ 0.73
AP1S3-204ENST00000409375 C5P01031 1676 aa19.59■□□□□ 0.73
AP1S3-204ENST00000409375 ERBB4Q15303 1308 aa19.59■□□□□ 0.73
AP1S3-204ENST00000409375 PLSCR1O15162 318 aa19.59■□□□□ 0.73
AP1S3-204ENST00000409375 EIF2S2P20042 333 aaKnown RBP19.59■□□□□ 0.73
AP1S3-204ENST00000409375 SLC27A3Q5K4L6 730 aa19.59■□□□□ 0.73
AP1S3-204ENST00000409375 RGPD3A6NKT7 1758 aaPredicted RBP19.59■□□□□ 0.73
AP1S3-204ENST00000409375 RGPD4Q7Z3J3 1758 aa19.59■□□□□ 0.73
AP1S3-204ENST00000409375 CACNA1FO60840 1977 aa19.59■□□□□ 0.73
AP1S3-204ENST00000409375 RARSP54136 660 aaKnown RBP19.58■□□□□ 0.72
AP1S3-204ENST00000409375 SMC4Q9NTJ3 1288 aa19.58■□□□□ 0.72
AP1S3-204ENST00000409375 CCNL1Q9UK58 526 aaPredicted RBP19.58■□□□□ 0.72
AP1S3-204ENST00000409375 KIF16BQ96L93 1317 aa19.57■□□□□ 0.72
AP1S3-204ENST00000409375 BAG6P46379 1132 aa19.57■□□□□ 0.72
AP1S3-204ENST00000409375 DBF4Q9UBU7 674 aaPredicted RBP19.57■□□□□ 0.72
AP1S3-204ENST00000409375 TJP1Q07157 1748 aa19.56■□□□□ 0.72
AP1S3-204ENST00000409375 DNAJC10Q8IXB1 793 aa19.56■□□□□ 0.72
AP1S3-204ENST00000409375 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms