RNA–Protein interactions for RNA: ENST00000409368.5

SUMO1-206, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 4 BASIC

Gene SUMO1, Length 1,187 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-206ENST00000409368 MTFR1LQ9H019 292 aa17.44■□□□□ 0.38
SUMO1-206ENST00000409368 PNPLA7Q6ZV29 1317 aa17.44■□□□□ 0.38
SUMO1-206ENST00000409368 C4BP0C0L5 1744 aa17.44■□□□□ 0.38
SUMO1-206ENST00000409368 UBR3Q6ZT12 1888 aa17.44■□□□□ 0.38
SUMO1-206ENST00000409368 AKAP4Q5JQC9 854 aa17.43■□□□□ 0.38
SUMO1-206ENST00000409368 KCNQ4P56696 695 aa17.42■□□□□ 0.38
SUMO1-206ENST00000409368 C1orf141Q5JVX7 400 aa17.42■□□□□ 0.38
SUMO1-206ENST00000409368 ATG3Q9NT62 314 aa17.42■□□□□ 0.38
SUMO1-206ENST00000409368 ASAP1Q9ULH1 1129 aa17.42■□□□□ 0.38
SUMO1-206ENST00000409368 LOC102724428A0A0B4J2F2 783 aa17.41■□□□□ 0.38
SUMO1-206ENST00000409368 SIK1P57059 783 aa17.41■□□□□ 0.38
SUMO1-206ENST00000409368 CFAP53Q96M91 514 aa17.41■□□□□ 0.38
SUMO1-206ENST00000409368 COL5A3P25940 1745 aaPredicted RBP17.41■□□□□ 0.38
SUMO1-206ENST00000409368 HMOX1P09601 288 aa17.4■□□□□ 0.38
SUMO1-206ENST00000409368 ZBTB7AO95365 584 aa17.39■□□□□ 0.37
SUMO1-206ENST00000409368 MTHFSDQ2M296 383 aaKnown RBP17.39■□□□□ 0.37
SUMO1-206ENST00000409368 TFCP2L1Q9NZI6 479 aa17.39■□□□□ 0.37
SUMO1-206ENST00000409368 FLAD1Q8NFF5 587 aa17.38■□□□□ 0.37
SUMO1-206ENST00000409368 MAP3K5Q99683 1374 aa17.38■□□□□ 0.37
SUMO1-206ENST00000409368 ZEB1P37275 1124 aaPredicted RBP17.37■□□□□ 0.37
SUMO1-206ENST00000409368 CABP4P57796 275 aa17.37■□□□□ 0.37
SUMO1-206ENST00000409368 RSPH6AQ9H0K4 717 aa17.37■□□□□ 0.37
SUMO1-206ENST00000409368 SIPA1L3O60292 1781 aaPredicted RBP17.37■□□□□ 0.37
SUMO1-206ENST00000409368 ITPK1Q13572 414 aa17.36■□□□□ 0.37
SUMO1-206ENST00000409368 SLC4A9Q96Q91 983 aa17.36■□□□□ 0.37
SUMO1-206ENST00000409368 NUDCQ9Y266 331 aa17.36■□□□□ 0.37
SUMO1-206ENST00000409368 UBR2Q8IWV8 1755 aa17.35■□□□□ 0.37
SUMO1-206ENST00000409368 U2SURPO15042 1029 aaKnown RBP17.35■□□□□ 0.37
SUMO1-206ENST00000409368 RNMTO43148 476 aaKnown RBP17.35■□□□□ 0.37
SUMO1-206ENST00000409368 FCHSD2O94868 740 aa17.35■□□□□ 0.37
SUMO1-206ENST00000409368 COL23A1Q86Y22 540 aaPredicted RBP17.35■□□□□ 0.37
SUMO1-206ENST00000409368 NFATC2IPQ8NCF5 419 aa17.35■□□□□ 0.37
SUMO1-206ENST00000409368 LINC00116Q8NCU8 138 aa17.35■□□□□ 0.37
SUMO1-206ENST00000409368 GAS2L2Q8NHY3 880 aa17.35■□□□□ 0.37
SUMO1-206ENST00000409368 SLC52A2Q9HAB3 445 aa17.35■□□□□ 0.37
SUMO1-206ENST00000409368 ATF5Q9Y2D1 282 aaPredicted RBP17.35■□□□□ 0.37
SUMO1-206ENST00000409368 MYH14Q7Z406 1995 aaKnown RBP17.35■□□□□ 0.37
SUMO1-206ENST00000409368 TJP1Q07157 1748 aa17.34■□□□□ 0.37
SUMO1-206ENST00000409368 CNGB1Q14028 1251 aaPredicted RBP17.34■□□□□ 0.37
SUMO1-206ENST00000409368 RALBP1Q15311 655 aa17.34■□□□□ 0.37
SUMO1-206ENST00000409368 RC3H1Q5TC82 1133 aaKnown RBP17.34■□□□□ 0.37
SUMO1-206ENST00000409368 LGR6Q9HBX8 967 aa17.34■□□□□ 0.37
SUMO1-206ENST00000409368 CEMIPQ8WUJ3 1361 aa17.33■□□□□ 0.36
SUMO1-206ENST00000409368 SSFA2P28290 1259 aa17.33■□□□□ 0.36
SUMO1-206ENST00000409368 ATP6V1AP38606 617 aa17.33■□□□□ 0.36
SUMO1-206ENST00000409368 CNTNAP4Q9C0A0 1308 aa17.32■□□□□ 0.36
SUMO1-206ENST00000409368 AMIGO3Q86WK7 504 aa17.32■□□□□ 0.36
SUMO1-206ENST00000409368 PPP1R1BQ9UD71 204 aaPredicted RBP17.32■□□□□ 0.36
SUMO1-206ENST00000409368 KCPQ6ZWJ8 1503 aa17.31■□□□□ 0.36
SUMO1-206ENST00000409368 PRKAR2BP31323 418 aa17.31■□□□□ 0.36
SUMO1-206ENST00000409368 PHACTR3Q96KR7 559 aa17.31■□□□□ 0.36
SUMO1-206ENST00000409368 AK7Q96M32 723 aa17.31■□□□□ 0.36
SUMO1-206ENST00000409368 GNAT3A8MTJ3 354 aa17.3■□□□□ 0.36
SUMO1-206ENST00000409368 DDX10Q13206 875 aaKnown RBP17.3■□□□□ 0.36
SUMO1-206ENST00000409368 IL17REQ8NFR9 667 aa17.3■□□□□ 0.36
SUMO1-206ENST00000409368 ARXQ96QS3 562 aa17.3■□□□□ 0.36
SUMO1-206ENST00000409368 U2AF1L5P0DN76 240 aaPredicted RBP17.29■□□□□ 0.36
SUMO1-206ENST00000409368 U2AF1Q01081 240 aaKnown RBP eCLIP17.29■□□□□ 0.36
SUMO1-206ENST00000409368 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.28■□□□□ 0.36
SUMO1-206ENST00000409368 VSIG10Q8N0Z9 540 aa17.28■□□□□ 0.36
SUMO1-206ENST00000409368 HTATSF1O43719 755 aaKnown RBP17.27■□□□□ 0.36
SUMO1-206ENST00000409368 POLD1P28340 1107 aa17.27■□□□□ 0.36
SUMO1-206ENST00000409368 SYT17Q9BSW7 474 aa17.27■□□□□ 0.36
SUMO1-206ENST00000409368 RBM42Q9BTD8 480 aaKnown RBP17.27■□□□□ 0.36
SUMO1-206ENST00000409368 FHDC1Q9C0D6 1143 aaPredicted RBP17.27■□□□□ 0.36
SUMO1-206ENST00000409368 DLG5Q8TDM6 1919 aa17.27■□□□□ 0.35
SUMO1-206ENST00000409368 C4AP0C0L4 1744 aa17.27■□□□□ 0.35
SUMO1-206ENST00000409368 RPS6KA4O75676 772 aa17.26■□□□□ 0.35
SUMO1-206ENST00000409368 PLEKHF1Q96S99 279 aa17.26■□□□□ 0.35
SUMO1-206ENST00000409368 MYBBP1AQ9BQG0 1328 aaKnown RBP17.25■□□□□ 0.35
SUMO1-206ENST00000409368 GNPATO15228 680 aa17.25■□□□□ 0.35
SUMO1-206ENST00000409368 PTCD1O75127 700 aaKnown RBP17.25■□□□□ 0.35
SUMO1-206ENST00000409368 UTRNP46939 3433 aa17.25■□□□□ 0.35
SUMO1-206ENST00000409368 RTCBQ9Y3I0 505 aaKnown RBP17.24■□□□□ 0.35
SUMO1-206ENST00000409368 CRKLP46109 303 aaKnown RBP17.23■□□□□ 0.35
SUMO1-206ENST00000409368 TEFQ10587 303 aa17.22■□□□□ 0.35
SUMO1-206ENST00000409368 SLC39A6Q13433 755 aa17.22■□□□□ 0.35
SUMO1-206ENST00000409368 INTS5Q6P9B9 1019 aaKnown RBP17.22■□□□□ 0.35
SUMO1-206ENST00000409368 ZNF790Q6PG37 636 aa17.22■□□□□ 0.35
SUMO1-206ENST00000409368 KIF13BQ9NQT8 1826 aa17.21■□□□□ 0.35
SUMO1-206ENST00000409368 GOLGB1Q14789 3259 aaKnown RBP17.21■□□□□ 0.35
SUMO1-206ENST00000409368 CYP19A1P11511 503 aaPredicted RBP17.21■□□□□ 0.35
SUMO1-206ENST00000409368 TRAPPC3LQ5T215 181 aa17.21■□□□□ 0.35
SUMO1-206ENST00000409368 PNNQ9H307 717 aaKnown RBP17.21■□□□□ 0.35
SUMO1-206ENST00000409368 PRKRIP1Q9H875 184 aaPredicted RBP17.21■□□□□ 0.35
SUMO1-206ENST00000409368 PHF14O94880 888 aa17.2■□□□□ 0.34
SUMO1-206ENST00000409368 SMIM5Q71RC9 77 aa17.2■□□□□ 0.34
SUMO1-206ENST00000409368 DNAJC10Q8IXB1 793 aa17.2■□□□□ 0.34
SUMO1-206ENST00000409368 ARHGEF1Q92888 912 aaKnown RBP17.2■□□□□ 0.34
SUMO1-206ENST00000409368 HEG1Q9ULI3 1381 aa17.19■□□□□ 0.34
SUMO1-206ENST00000409368 CCDC87Q9NVE4 849 aa17.19■□□□□ 0.34
SUMO1-206ENST00000409368 CD2APQ9Y5K6 639 aa17.19■□□□□ 0.34
SUMO1-206ENST00000409368 MSL1Q68DK7 614 aa17.18■□□□□ 0.34
SUMO1-206ENST00000409368 NLGN1Q8N2Q7 840 aa17.18■□□□□ 0.34
SUMO1-206ENST00000409368 ZNF496Q96IT1 587 aaPredicted RBP17.18■□□□□ 0.34
SUMO1-206ENST00000409368 SOS1Q07889 1333 aaPredicted RBP17.18■□□□□ 0.34
SUMO1-206ENST00000409368 GYS1P13807 737 aa17.17■□□□□ 0.34
SUMO1-206ENST00000409368 NFE2L2Q16236 605 aa17.17■□□□□ 0.34
SUMO1-206ENST00000409368 TTC5Q8N0Z6 440 aa17.17■□□□□ 0.34
SUMO1-206ENST00000409368 RTF1Q92541 710 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms