RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 RWDD1Q9H446 243 aaPredicted RBP13.17□□□□□ -0.3
NIF3L1-204ENST00000409357 PRDM11Q9NQV5 511 aa13.17□□□□□ -0.3
NIF3L1-204ENST00000409357 CPSF1Q10570 1443 aaKnown RBP13.17□□□□□ -0.3
NIF3L1-204ENST00000409357 VPS72Q15906 364 aa13.16□□□□□ -0.3
NIF3L1-204ENST00000409357 PPP4R3BQ5MIZ7 849 aa13.16□□□□□ -0.3
NIF3L1-204ENST00000409357 ATAD2Q6PL18 1390 aa13.16□□□□□ -0.3
NIF3L1-204ENST00000409357 HMGN5P82970 282 aaKnown RBP13.15□□□□□ -0.3
NIF3L1-204ENST00000409357 BBXQ8WY36 941 aaPredicted RBP13.15□□□□□ -0.3
NIF3L1-204ENST00000409357 ARXQ96QS3 562 aa13.15□□□□□ -0.3
NIF3L1-204ENST00000409357 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.15□□□□□ -0.3
NIF3L1-204ENST00000409357 FBXO3Q9UK99 471 aa13.15□□□□□ -0.3
NIF3L1-204ENST00000409357 SLIT3O75094 1523 aa13.15□□□□□ -0.3
NIF3L1-204ENST00000409357 CAMTA1Q9Y6Y1 1673 aa13.15□□□□□ -0.3
NIF3L1-204ENST00000409357 MYRIPQ8NFW9 859 aa13.15□□□□□ -0.31
NIF3L1-204ENST00000409357 PDZRN3Q9UPQ7 1066 aa13.15□□□□□ -0.31
NIF3L1-204ENST00000409357 CCDC9Q9Y3X0 531 aaKnown RBP13.15□□□□□ -0.31
NIF3L1-204ENST00000409357 TAF7LQ5H9L4 462 aa13.14□□□□□ -0.31
NIF3L1-204ENST00000409357 CCDC39Q9UFE4 941 aa13.14□□□□□ -0.31
NIF3L1-204ENST00000409357 GCP02774 474 aa13.13□□□□□ -0.31
NIF3L1-204ENST00000409357 PPP2R1AP30153 589 aa13.13□□□□□ -0.31
NIF3L1-204ENST00000409357 SLC12A5Q9H2X9 1139 aa13.13□□□□□ -0.31
NIF3L1-204ENST00000409357 TTC21BQ7Z4L5 1316 aa13.13□□□□□ -0.31
NIF3L1-204ENST00000409357 NLRP6P59044 892 aa13.12□□□□□ -0.31
NIF3L1-204ENST00000409357 CPDO75976 1380 aa13.12□□□□□ -0.31
NIF3L1-204ENST00000409357 THSD7AQ9UPZ6 1657 aa13.12□□□□□ -0.31
NIF3L1-204ENST00000409357 COL18A1P39060 1754 aa13.12□□□□□ -0.31
NIF3L1-204ENST00000409357 RGPD5Q99666 1765 aa13.12□□□□□ -0.31
NIF3L1-204ENST00000409357 FAM98CQ17RN3 349 aaKnown RBP13.12□□□□□ -0.31
NIF3L1-204ENST00000409357 SEPT12Q8IYM1 358 aa13.12□□□□□ -0.31
NIF3L1-204ENST00000409357 PANK3Q9H999 370 aa13.12□□□□□ -0.31
NIF3L1-204ENST00000409357 ZRANB1Q9UGI0 708 aa13.12□□□□□ -0.31
NIF3L1-204ENST00000409357 A0A1W2PP64 1363 aa13.11□□□□□ -0.31
NIF3L1-204ENST00000409357 BCAR3O75815 825 aa13.11□□□□□ -0.31
NIF3L1-204ENST00000409357 STRN4Q9NRL3 753 aa13.11□□□□□ -0.31
NIF3L1-204ENST00000409357 USP54Q70EL1 1684 aa13.11□□□□□ -0.31
NIF3L1-204ENST00000409357 SPATA31A5Q5VU36 1347 aa13.1□□□□□ -0.31
NIF3L1-204ENST00000409357 SPATA31A7Q8IWB4 1347 aa13.1□□□□□ -0.31
NIF3L1-204ENST00000409357 NFAT5O94916 1531 aa13.1□□□□□ -0.31
NIF3L1-204ENST00000409357 TMF1P82094 1093 aa13.1□□□□□ -0.31
NIF3L1-204ENST00000409357 SLC20A2Q08357 652 aa13.1□□□□□ -0.31
NIF3L1-204ENST00000409357 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.1□□□□□ -0.31
NIF3L1-204ENST00000409357 KLHL34Q8N239 644 aa13.1□□□□□ -0.31
NIF3L1-204ENST00000409357 NAP1L2Q9ULW6 460 aaPredicted RBP13.1□□□□□ -0.31
NIF3L1-204ENST00000409357 KIF16BQ96L93 1317 aa13.1□□□□□ -0.31
NIF3L1-204ENST00000409357 SOX12O15370 315 aa13.09□□□□□ -0.31
NIF3L1-204ENST00000409357 ONECUT3O60422 494 aaPredicted RBP13.09□□□□□ -0.31
NIF3L1-204ENST00000409357 POLA2Q14181 598 aa13.09□□□□□ -0.31
NIF3L1-204ENST00000409357 TMEM51Q9NW97 253 aa13.09□□□□□ -0.31
NIF3L1-204ENST00000409357 ZHX1Q9UKY1 873 aaPredicted RBP13.09□□□□□ -0.31
NIF3L1-204ENST00000409357 MYOM1P52179 1685 aa13.09□□□□□ -0.31
NIF3L1-204ENST00000409357 COL5A2P05997 1499 aaPredicted RBP13.09□□□□□ -0.31
NIF3L1-204ENST00000409357 ZBTB7CA1YPR0 619 aa13.08□□□□□ -0.31
NIF3L1-204ENST00000409357 HDAC1Q13547 482 aaPredicted RBP13.08□□□□□ -0.31
NIF3L1-204ENST00000409357 NME9Q86XW9 330 aa13.08□□□□□ -0.31
NIF3L1-204ENST00000409357 LTN1O94822 1766 aa13.08□□□□□ -0.32
NIF3L1-204ENST00000409357 VASPP50552 380 aaPredicted RBP13.08□□□□□ -0.32
NIF3L1-204ENST00000409357 CC2D1BQ5T0F9 858 aaKnown RBP13.08□□□□□ -0.32
NIF3L1-204ENST00000409357 LARP1Q6PKG0 1096 aaKnown RBP13.08□□□□□ -0.32
NIF3L1-204ENST00000409357 PCDHB15Q9Y5E8 787 aa13.08□□□□□ -0.32
NIF3L1-204ENST00000409357 SPATA31A1Q5TZJ5 1347 aa13.07□□□□□ -0.32
NIF3L1-204ENST00000409357 TTC21AQ8NDW8 1320 aa13.07□□□□□ -0.32
NIF3L1-204ENST00000409357 A0A0G2JS52 829 aa13.07□□□□□ -0.32
NIF3L1-204ENST00000409357 FAM182BQ5T319 152 aa13.07□□□□□ -0.32
NIF3L1-204ENST00000409357 EDC4Q6P2E9 1401 aaKnown RBP13.06□□□□□ -0.32
NIF3L1-204ENST00000409357 FAM193AP78312 1265 aa13.06□□□□□ -0.32
NIF3L1-204ENST00000409357 FEZ1Q99689 392 aa13.06□□□□□ -0.32
NIF3L1-204ENST00000409357 BCL11BQ9C0K0 894 aaPredicted RBP13.06□□□□□ -0.32
NIF3L1-204ENST00000409357 AXIN2Q9Y2T1 843 aa13.06□□□□□ -0.32
NIF3L1-204ENST00000409357 COG6Q9Y2V7 657 aa13.06□□□□□ -0.32
NIF3L1-204ENST00000409357 NUCB2P80303 420 aa13.05□□□□□ -0.32
NIF3L1-204ENST00000409357 CDCA8Q53HL2 280 aa13.05□□□□□ -0.32
NIF3L1-204ENST00000409357 IFNLR1Q8IU57 520 aaPredicted RBP13.05□□□□□ -0.32
NIF3L1-204ENST00000409357 DDX49Q9Y6V7 483 aaKnown RBP13.05□□□□□ -0.32
NIF3L1-204ENST00000409357 BAG4O95429 457 aaKnown RBP13.05□□□□□ -0.32
NIF3L1-204ENST00000409357 CT47B1P0C2W7 299 aaPredicted RBP13.05□□□□□ -0.32
NIF3L1-204ENST00000409357 PUS7Q96PZ0 661 aaKnown RBP13.05□□□□□ -0.32
NIF3L1-204ENST00000409357 AATKQ6ZMQ8 1374 aa13.04□□□□□ -0.32
NIF3L1-204ENST00000409357 USP31Q70CQ4 1352 aa13.04□□□□□ -0.32
NIF3L1-204ENST00000409357 OVOS2A0A0J9YW53 1432 aa13.04□□□□□ -0.32
NIF3L1-204ENST00000409357 OVOS2Q6IE36 1432 aa13.04□□□□□ -0.32
NIF3L1-204ENST00000409357 WNK3Q9BYP7 1800 aa13.04□□□□□ -0.32
NIF3L1-204ENST00000409357 K7ELQ4 463 aaPredicted RBP13.04□□□□□ -0.32
NIF3L1-204ENST00000409357 KRT27Q7Z3Y8 459 aa13.04□□□□□ -0.32
NIF3L1-204ENST00000409357 HDGFL2Q7Z4V5 671 aaPredicted RBP13.04□□□□□ -0.32
NIF3L1-204ENST00000409357 RARSP54136 660 aaKnown RBP13.03□□□□□ -0.32
NIF3L1-204ENST00000409357 EVA1CP58658 441 aa13.03□□□□□ -0.32
NIF3L1-204ENST00000409357 KIAA2012Q0VF49 1180 aa13.03□□□□□ -0.32
NIF3L1-204ENST00000409357 ARHGEF25Q86VW2 580 aa13.03□□□□□ -0.32
NIF3L1-204ENST00000409357 SPRYD3Q8NCJ5 442 aa13.03□□□□□ -0.32
NIF3L1-204ENST00000409357 TERF2IPQ9NYB0 399 aa13.03□□□□□ -0.32
NIF3L1-204ENST00000409357 KNSTRNQ9Y448 316 aa13.03□□□□□ -0.32
NIF3L1-204ENST00000409357 CYP2E1P05181 493 aaPredicted RBP13.02□□□□□ -0.32
NIF3L1-204ENST00000409357 MFAP1P55081 439 aaKnown RBP13.02□□□□□ -0.32
NIF3L1-204ENST00000409357 GABPB1Q06547 395 aaPredicted RBP13.02□□□□□ -0.32
NIF3L1-204ENST00000409357 ZSCAN23Q3MJ62 389 aa13.02□□□□□ -0.32
NIF3L1-204ENST00000409357 PANK1Q8TE04 598 aa13.02□□□□□ -0.32
NIF3L1-204ENST00000409357 CFAP44Q96MT7 982 aa13.02□□□□□ -0.32
NIF3L1-204ENST00000409357 PARP4Q9UKK3 1724 aaKnown RBP13.02□□□□□ -0.33
NIF3L1-204ENST00000409357 SYCP1Q15431 976 aa13.02□□□□□ -0.33
NIF3L1-204ENST00000409357 WDR63Q8IWG1 891 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms