RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 SLC52A2Q9HAB3 445 aa21.81■■□□□ 1.08
SSB-202ENST00000409333 SUPT16HQ9Y5B9 1047 aaKnown RBP21.81■■□□□ 1.08
SSB-202ENST00000409333 PAPPAQ13219 1627 aa21.81■■□□□ 1.08
SSB-202ENST00000409333 BTBD11A6QL63 1104 aa21.79■■□□□ 1.08
SSB-202ENST00000409333 KRT24Q2M2I5 525 aa21.79■■□□□ 1.08
SSB-202ENST00000409333 NFATC2IPQ8NCF5 419 aa21.79■■□□□ 1.08
SSB-202ENST00000409333 BABAM1Q9NWV8 329 aa21.79■■□□□ 1.08
SSB-202ENST00000409333 UBR2Q8IWV8 1755 aa21.78■■□□□ 1.08
SSB-202ENST00000409333 A0A0G2JS52 829 aa21.78■■□□□ 1.08
SSB-202ENST00000409333 MYT1Q01538 1121 aa21.78■■□□□ 1.08
SSB-202ENST00000409333 TSPYL6Q8N831 410 aa21.78■■□□□ 1.08
SSB-202ENST00000409333 C8orf58Q8NAV2 365 aa21.78■■□□□ 1.08
SSB-202ENST00000409333 MARCH10Q8NA82 808 aaPredicted RBP21.77■■□□□ 1.08
SSB-202ENST00000409333 CABP4P57796 275 aa21.76■■□□□ 1.07
SSB-202ENST00000409333 C5P01031 1676 aa21.76■■□□□ 1.07
SSB-202ENST00000409333 ERVV-2B6SEH9 535 aa21.76■■□□□ 1.07
SSB-202ENST00000409333 ELL2O00472 640 aaPredicted RBP21.76■■□□□ 1.07
SSB-202ENST00000409333 KCNQ3O43525 872 aa21.76■■□□□ 1.07
SSB-202ENST00000409333 ZNF772Q68DY9 489 aaPredicted RBP21.76■■□□□ 1.07
SSB-202ENST00000409333 CT47B1P0C2W7 299 aaPredicted RBP21.75■■□□□ 1.07
SSB-202ENST00000409333 SBF2Q86WG5 1849 aa21.74■■□□□ 1.07
SSB-202ENST00000409333 TWISTNBQ3B726 338 aaPredicted RBP21.74■■□□□ 1.07
SSB-202ENST00000409333 ONECUT3O60422 494 aaPredicted RBP21.74■■□□□ 1.07
SSB-202ENST00000409333 CACNA1FO60840 1977 aa21.73■■□□□ 1.07
SSB-202ENST00000409333 VAMP4O75379 141 aa21.73■■□□□ 1.07
SSB-202ENST00000409333 SLC39A6Q13433 755 aa21.73■■□□□ 1.07
SSB-202ENST00000409333 BCAR3O75815 825 aa21.72■■□□□ 1.07
SSB-202ENST00000409333 RARSP54136 660 aaKnown RBP21.72■■□□□ 1.07
SSB-202ENST00000409333 RNF123Q5XPI4 1314 aa21.72■■□□□ 1.07
SSB-202ENST00000409333 EIF4A1P60842 406 aaKnown RBP21.71■■□□□ 1.07
SSB-202ENST00000409333 SEPT12Q8IYM1 358 aa21.71■■□□□ 1.07
SSB-202ENST00000409333 BCL2L13Q9BXK5 485 aa21.71■■□□□ 1.07
SSB-202ENST00000409333 LAMB4A4D0S4 1761 aa21.7■■□□□ 1.06
SSB-202ENST00000409333 ZNF790Q6PG37 636 aa21.7■■□□□ 1.06
SSB-202ENST00000409333 TMOD3Q9NYL9 352 aa21.7■■□□□ 1.06
SSB-202ENST00000409333 RGS17Q9UGC6 210 aaPredicted RBP21.69■■□□□ 1.06
SSB-202ENST00000409333 RRP1P56182 461 aaKnown RBP21.69■■□□□ 1.06
SSB-202ENST00000409333 NHSQ6T4R5 1651 aa21.69■■□□□ 1.06
SSB-202ENST00000409333 BCL9O00512 1426 aa21.68■■□□□ 1.06
SSB-202ENST00000409333 KCPQ6ZWJ8 1503 aa21.68■■□□□ 1.06
SSB-202ENST00000409333 RBM6P78332 1123 aaKnown RBP21.68■■□□□ 1.06
SSB-202ENST00000409333 SSH1Q8WYL5 1049 aa21.68■■□□□ 1.06
SSB-202ENST00000409333 HEG1Q9ULI3 1381 aa21.67■■□□□ 1.06
SSB-202ENST00000409333 PIGBQ92521 554 aa21.67■■□□□ 1.06
SSB-202ENST00000409333 ACSBG1Q96GR2 724 aa21.67■■□□□ 1.06
SSB-202ENST00000409333 PLIN1O60240 522 aa21.66■■□□□ 1.06
SSB-202ENST00000409333 SYTL4Q96C24 671 aaPredicted RBP21.66■■□□□ 1.06
SSB-202ENST00000409333 BTAF1O14981 1849 aa21.66■■□□□ 1.06
SSB-202ENST00000409333 PRIM1P49642 420 aaKnown RBP21.66■■□□□ 1.06
SSB-202ENST00000409333 FAM182BQ5T319 152 aa21.66■■□□□ 1.06
SSB-202ENST00000409333 TTC5Q8N0Z6 440 aa21.66■■□□□ 1.06
SSB-202ENST00000409333 ZNF428Q96B54 188 aa21.66■■□□□ 1.06
SSB-202ENST00000409333 SMC4Q9NTJ3 1288 aa21.66■■□□□ 1.06
SSB-202ENST00000409333 TCERG1O14776 1098 aaKnown RBP21.65■■□□□ 1.06
SSB-202ENST00000409333 IRX6P78412 446 aaPredicted RBP21.65■■□□□ 1.06
SSB-202ENST00000409333 ALDH1L2Q3SY69 923 aa21.65■■□□□ 1.06
SSB-202ENST00000409333 ZNF496Q96IT1 587 aaPredicted RBP21.64■■□□□ 1.06
SSB-202ENST00000409333 EP400Q96L91 3159 aa21.63■■□□□ 1.05
SSB-202ENST00000409333 PRAMEF22A3QJZ6 481 aa21.63■■□□□ 1.05
SSB-202ENST00000409333 GIGYF1O75420 1035 aaPredicted RBP21.63■■□□□ 1.05
SSB-202ENST00000409333 ILDR1Q86SU0 546 aaPredicted RBP21.63■■□□□ 1.05
SSB-202ENST00000409333 SOS1Q07889 1333 aaPredicted RBP21.63■■□□□ 1.05
SSB-202ENST00000409333 POTEAQ6S8J7 498 aa21.62■■□□□ 1.05
SSB-202ENST00000409333 ASAP1Q9ULH1 1129 aa21.62■■□□□ 1.05
SSB-202ENST00000409333 NECTIN2Q92692 538 aa21.61■■□□□ 1.05
SSB-202ENST00000409333 KCNQ2O43526 872 aa21.61■■□□□ 1.05
SSB-202ENST00000409333 HOXB7P09629 217 aa21.61■■□□□ 1.05
SSB-202ENST00000409333 RXRBP28702 533 aa21.61■■□□□ 1.05
SSB-202ENST00000409333 MRPL50Q8N5N7 158 aaKnown RBP21.61■■□□□ 1.05
SSB-202ENST00000409333 FRAT1Q92837 279 aaPredicted RBP21.61■■□□□ 1.05
SSB-202ENST00000409333 FMNL2Q96PY5 1086 aa21.61■■□□□ 1.05
SSB-202ENST00000409333 ATG3Q9NT62 314 aa21.61■■□□□ 1.05
SSB-202ENST00000409333 RGS12O14924 1447 aa21.6■■□□□ 1.05
SSB-202ENST00000409333 NEFLP07196 543 aa21.6■■□□□ 1.05
SSB-202ENST00000409333 GTF3C3Q9Y5Q9 886 aa21.6■■□□□ 1.05
SSB-202ENST00000409333 TJP1Q07157 1748 aa21.6■■□□□ 1.05
SSB-202ENST00000409333 HDGFL1Q5TGJ6 251 aa21.59■■□□□ 1.05
SSB-202ENST00000409333 PTCD1O75127 700 aaKnown RBP21.59■■□□□ 1.05
SSB-202ENST00000409333 EIF2S2P20042 333 aaKnown RBP21.59■■□□□ 1.05
SSB-202ENST00000409333 KRT27Q7Z3Y8 459 aa21.59■■□□□ 1.05
SSB-202ENST00000409333 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.59■■□□□ 1.05
SSB-202ENST00000409333 CANXP27824 592 aaKnown RBP21.58■■□□□ 1.04
SSB-202ENST00000409333 BRPF1P55201 1214 aaPredicted RBP21.57■■□□□ 1.04
SSB-202ENST00000409333 FKBP8Q14318 412 aa21.57■■□□□ 1.04
SSB-202ENST00000409333 C20orf194Q5TEA3 1177 aa21.57■■□□□ 1.04
SSB-202ENST00000409333 CCDC30Q5VVM6 783 aa21.57■■□□□ 1.04
SSB-202ENST00000409333 KIF16BQ96L93 1317 aa21.57■■□□□ 1.04
SSB-202ENST00000409333 SNRPA1P09661 255 aaKnown RBP21.56■■□□□ 1.04
SSB-202ENST00000409333 NOB1Q9ULX3 412 aaKnown RBP21.56■■□□□ 1.04
SSB-202ENST00000409333 PTF1AQ7RTS3 328 aa21.56■■□□□ 1.04
SSB-202ENST00000409333 TNNQ9UQP3 1299 aa21.56■■□□□ 1.04
SSB-202ENST00000409333 CICQ96RK0 1608 aaPredicted RBP21.55■■□□□ 1.04
SSB-202ENST00000409333 SLC4A2P04920 1241 aa21.55■■□□□ 1.04
SSB-202ENST00000409333 STK31Q9BXU1 1019 aa21.55■■□□□ 1.04
SSB-202ENST00000409333 LY75O60449 1722 aa21.54■■□□□ 1.04
SSB-202ENST00000409333 USP16Q9Y5T5 823 aa21.54■■□□□ 1.04
SSB-202ENST00000409333 ZKSCAN2Q63HK3 967 aa21.53■■□□□ 1.04
SSB-202ENST00000409333 RBM42Q9BTD8 480 aaKnown RBP21.53■■□□□ 1.04
SSB-202ENST00000409333 CHPF2Q9P2E5 772 aa21.53■■□□□ 1.04
SSB-202ENST00000409333 COL5A3P25940 1745 aaPredicted RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms