RNA–Protein interactions for RNA: ENST00000409159.2

RAB1C-201, Transcript of RAB1C, member RAS oncogene family pseudogene, humanhuman

BASIC

Gene RAB1C, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1C-201ENST00000409159 TNS2Q63HR2 1409 aa14.41□□□□□ -0.1
RAB1C-201ENST00000409159 HEG1Q9ULI3 1381 aa14.4□□□□□ -0.1
RAB1C-201ENST00000409159 BCAR3O75815 825 aa14.4□□□□□ -0.1
RAB1C-201ENST00000409159 EIF4A1P60842 406 aaKnown RBP14.4□□□□□ -0.1
RAB1C-201ENST00000409159 MEX3CQ5U5Q3 659 aaKnown RBP14.4□□□□□ -0.1
RAB1C-201ENST00000409159 SSH1Q8WYL5 1049 aa14.4□□□□□ -0.1
RAB1C-201ENST00000409159 SMC4Q9NTJ3 1288 aa14.4□□□□□ -0.1
RAB1C-201ENST00000409159 USP21Q9UK80 565 aa14.4□□□□□ -0.1
RAB1C-201ENST00000409159 CABP4P57796 275 aa14.39□□□□□ -0.11
RAB1C-201ENST00000409159 TSPYL6Q8N831 410 aa14.39□□□□□ -0.11
RAB1C-201ENST00000409159 USP35Q9P2H5 1018 aa14.39□□□□□ -0.11
RAB1C-201ENST00000409159 DDB1Q16531 1140 aa14.38□□□□□ -0.11
RAB1C-201ENST00000409159 ZKSCAN2Q63HK3 967 aa14.38□□□□□ -0.11
RAB1C-201ENST00000409159 ONECUT3O60422 494 aaPredicted RBP14.37□□□□□ -0.11
RAB1C-201ENST00000409159 CCDC30Q5VVM6 783 aa14.37□□□□□ -0.11
RAB1C-201ENST00000409159 ZNF790Q6PG37 636 aa14.37□□□□□ -0.11
RAB1C-201ENST00000409159 MRPL50Q8N5N7 158 aaKnown RBP14.37□□□□□ -0.11
RAB1C-201ENST00000409159 DDX54Q8TDD1 881 aaKnown RBP14.37□□□□□ -0.11
RAB1C-201ENST00000409159 FBXO41Q8TF61 875 aa14.37□□□□□ -0.11
RAB1C-201ENST00000409159 MIS18AQ9NYP9 233 aa14.37□□□□□ -0.11
RAB1C-201ENST00000409159 TRPC5Q9UL62 973 aaPredicted RBP14.37□□□□□ -0.11
RAB1C-201ENST00000409159 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.37□□□□□ -0.11
RAB1C-201ENST00000409159 CANXP27824 592 aaKnown RBP14.36□□□□□ -0.11
RAB1C-201ENST00000409159 NFATC2IPQ8NCF5 419 aa14.36□□□□□ -0.11
RAB1C-201ENST00000409159 CCDC9Q9Y3X0 531 aaKnown RBP14.36□□□□□ -0.11
RAB1C-201ENST00000409159 PTPRCP08575 1304 aa14.36□□□□□ -0.11
RAB1C-201ENST00000409159 AFF2P51816 1311 aa14.36□□□□□ -0.11
RAB1C-201ENST00000409159 ATRNO75882 1429 aa14.35□□□□□ -0.11
RAB1C-201ENST00000409159 ATF7IPQ6VMQ6 1270 aa14.35□□□□□ -0.11
RAB1C-201ENST00000409159 STK31Q9BXU1 1019 aa14.35□□□□□ -0.11
RAB1C-201ENST00000409159 API5Q9BZZ5 524 aaKnown RBP14.35□□□□□ -0.11
RAB1C-201ENST00000409159 PPP4R2Q9NY27 417 aa14.35□□□□□ -0.11
RAB1C-201ENST00000409159 GIGYF1O75420 1035 aaPredicted RBP14.34□□□□□ -0.11
RAB1C-201ENST00000409159 TTC5Q8N0Z6 440 aa14.34□□□□□ -0.11
RAB1C-201ENST00000409159 GJD4Q96KN9 370 aaPredicted RBP14.34□□□□□ -0.11
RAB1C-201ENST00000409159 FMNL2Q96PY5 1086 aa14.34□□□□□ -0.11
RAB1C-201ENST00000409159 CHMP4BQ9H444 224 aaKnown RBP14.34□□□□□ -0.11
RAB1C-201ENST00000409159 BCL9O00512 1426 aa14.33□□□□□ -0.11
RAB1C-201ENST00000409159 ELL2O00472 640 aaPredicted RBP14.33□□□□□ -0.12
RAB1C-201ENST00000409159 PLIN1O60240 522 aa14.33□□□□□ -0.12
RAB1C-201ENST00000409159 DZIP1LQ8IYY4 767 aaKnown RBP14.33□□□□□ -0.12
RAB1C-201ENST00000409159 TMOD3Q9NYL9 352 aa14.33□□□□□ -0.12
RAB1C-201ENST00000409159 NOB1Q9ULX3 412 aaKnown RBP14.33□□□□□ -0.12
RAB1C-201ENST00000409159 SCN11AQ9UI33 1791 aa14.32□□□□□ -0.12
RAB1C-201ENST00000409159 SNRPA1P09661 255 aaKnown RBP14.32□□□□□ -0.12
RAB1C-201ENST00000409159 KRT24Q2M2I5 525 aa14.32□□□□□ -0.12
RAB1C-201ENST00000409159 VSIG10Q8N0Z9 540 aa14.32□□□□□ -0.12
RAB1C-201ENST00000409159 FRAT1Q92837 279 aaPredicted RBP14.32□□□□□ -0.12
RAB1C-201ENST00000409159 TRIM27P14373 513 aa14.31□□□□□ -0.12
RAB1C-201ENST00000409159 HDGFL1Q5TGJ6 251 aa14.31□□□□□ -0.12
RAB1C-201ENST00000409159 ZNF772Q68DY9 489 aaPredicted RBP14.31□□□□□ -0.12
RAB1C-201ENST00000409159 FTSJ3Q8IY81 847 aaKnown RBP14.31□□□□□ -0.12
RAB1C-201ENST00000409159 BCL2L13Q9BXK5 485 aa14.31□□□□□ -0.12
RAB1C-201ENST00000409159 ERBB4Q15303 1308 aa14.31□□□□□ -0.12
RAB1C-201ENST00000409159 KDM3BQ7LBC6 1761 aa14.31□□□□□ -0.12
RAB1C-201ENST00000409159 SIPA1L3O60292 1781 aaPredicted RBP14.3□□□□□ -0.12
RAB1C-201ENST00000409159 KCNQ3O43525 872 aa14.3□□□□□ -0.12
RAB1C-201ENST00000409159 SLC4A2P04920 1241 aa14.3□□□□□ -0.12
RAB1C-201ENST00000409159 FAM98CQ17RN3 349 aaKnown RBP14.3□□□□□ -0.12
RAB1C-201ENST00000409159 TEX13AQ9BXU3 409 aaPredicted RBP14.3□□□□□ -0.12
RAB1C-201ENST00000409159 DBF4Q9UBU7 674 aaPredicted RBP14.3□□□□□ -0.12
RAB1C-201ENST00000409159 WNK3Q9BYP7 1800 aa14.29□□□□□ -0.12
RAB1C-201ENST00000409159 IRX6P78412 446 aaPredicted RBP14.29□□□□□ -0.12
RAB1C-201ENST00000409159 MARCH10Q8NA82 808 aaPredicted RBP14.29□□□□□ -0.12
RAB1C-201ENST00000409159 CRBNQ96SW2 442 aa14.29□□□□□ -0.12
RAB1C-201ENST00000409159 SHANK3Q9BYB0 1731 aa14.29□□□□□ -0.12
RAB1C-201ENST00000409159 ABCC4O15439 1325 aa14.28□□□□□ -0.12
RAB1C-201ENST00000409159 MVPQ14764 893 aaKnown RBP14.28□□□□□ -0.12
RAB1C-201ENST00000409159 C20orf194Q5TEA3 1177 aa14.28□□□□□ -0.12
RAB1C-201ENST00000409159 EXOC6Q8TAG9 804 aa14.28□□□□□ -0.12
RAB1C-201ENST00000409159 PIGBQ92521 554 aa14.28□□□□□ -0.12
RAB1C-201ENST00000409159 ZNF496Q96IT1 587 aaPredicted RBP14.28□□□□□ -0.12
RAB1C-201ENST00000409159 QTRT2Q9H974 415 aaKnown RBP14.28□□□□□ -0.12
RAB1C-201ENST00000409159 HYPKQ9NX55 129 aa14.28□□□□□ -0.12
RAB1C-201ENST00000409159 DDX19BQ9UMR2 479 aa14.28□□□□□ -0.12
RAB1C-201ENST00000409159 SLC39A6Q13433 755 aa14.27□□□□□ -0.13
RAB1C-201ENST00000409159 DDX21Q9NR30 783 aaKnown RBP eCLIP14.27□□□□□ -0.13
RAB1C-201ENST00000409159 THSD7AQ9UPZ6 1657 aa14.26□□□□□ -0.13
RAB1C-201ENST00000409159 INTS3Q68E01 1043 aaKnown RBP14.26□□□□□ -0.13
RAB1C-201ENST00000409159 SMARCC1Q92922 1105 aaPredicted RBP14.26□□□□□ -0.13
RAB1C-201ENST00000409159 FLIIQ13045 1269 aa14.25□□□□□ -0.13
RAB1C-201ENST00000409159 PANK1Q8TE04 598 aa14.25□□□□□ -0.13
RAB1C-201ENST00000409159 ATG3Q9NT62 314 aa14.25□□□□□ -0.13
RAB1C-201ENST00000409159 IBTKQ9P2D0 1353 aaPredicted RBP14.24□□□□□ -0.13
RAB1C-201ENST00000409159 RLBP1P12271 317 aa14.24□□□□□ -0.13
RAB1C-201ENST00000409159 PRIM1P49642 420 aaKnown RBP14.24□□□□□ -0.13
RAB1C-201ENST00000409159 CCT4P50991 539 aaKnown RBP14.24□□□□□ -0.13
RAB1C-201ENST00000409159 RBM6P78332 1123 aaKnown RBP14.24□□□□□ -0.13
RAB1C-201ENST00000409159 COG6Q9Y2V7 657 aa14.24□□□□□ -0.13
RAB1C-201ENST00000409159 GLI3P10071 1580 aa14.24□□□□□ -0.13
RAB1C-201ENST00000409159 DDX58O95786 925 aaKnown RBP14.23□□□□□ -0.13
RAB1C-201ENST00000409159 EIF2S2P20042 333 aaKnown RBP14.23□□□□□ -0.13
RAB1C-201ENST00000409159 SEPT12Q8IYM1 358 aa14.23□□□□□ -0.13
RAB1C-201ENST00000409159 CLUAP1Q96AJ1 413 aa14.23□□□□□ -0.13
RAB1C-201ENST00000409159 CHPF2Q9P2E5 772 aa14.23□□□□□ -0.13
RAB1C-201ENST00000409159 KCPQ6ZWJ8 1503 aa14.23□□□□□ -0.13
RAB1C-201ENST00000409159 PAPPAQ13219 1627 aa14.23□□□□□ -0.13
RAB1C-201ENST00000409159 HMGB2P26583 209 aaKnown RBP14.22□□□□□ -0.13
RAB1C-201ENST00000409159 TMEM57Q8N5G2 664 aa14.22□□□□□ -0.13
RAB1C-201ENST00000409159 CCDC136Q96JN2 1154 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms