RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 FOXK2Q01167 660 aa11.67□□□□□ -0.54
PTPN12-202ENST00000407343 TNS4Q8IZW8 715 aa11.67□□□□□ -0.54
PTPN12-202ENST00000407343 ESYT1Q9BSJ8 1104 aa11.67□□□□□ -0.54
PTPN12-202ENST00000407343 FHDC1Q9C0D6 1143 aaPredicted RBP11.67□□□□□ -0.54
PTPN12-202ENST00000407343 SERTAD1Q9UHV2 236 aa11.67□□□□□ -0.54
PTPN12-202ENST00000407343 NRG2O14511 850 aaPredicted RBP11.66□□□□□ -0.54
PTPN12-202ENST00000407343 CAPN5O15484 640 aaPredicted RBP11.66□□□□□ -0.54
PTPN12-202ENST00000407343 RELBQ01201 579 aa11.66□□□□□ -0.54
PTPN12-202ENST00000407343 ZNF295-AS1Q8N0V1 137 aa11.66□□□□□ -0.54
PTPN12-202ENST00000407343 CNKSR1Q969H4 720 aa11.66□□□□□ -0.54
PTPN12-202ENST00000407343 USP3Q9Y6I4 520 aa11.66□□□□□ -0.54
PTPN12-202ENST00000407343 C21orf2O43822 256 aa11.65□□□□□ -0.54
PTPN12-202ENST00000407343 ESCO1Q5FWF5 840 aa11.65□□□□□ -0.54
PTPN12-202ENST00000407343 IQSEC3Q9UPP2 1182 aaPredicted RBP11.65□□□□□ -0.54
PTPN12-202ENST00000407343 PRMT3O60678 531 aa11.64□□□□□ -0.55
PTPN12-202ENST00000407343 ATP2B4P23634 1241 aa11.64□□□□□ -0.55
PTPN12-202ENST00000407343 SMCPP49901 116 aaPredicted RBP11.64□□□□□ -0.55
PTPN12-202ENST00000407343 SMTNP53814 917 aa11.64□□□□□ -0.55
PTPN12-202ENST00000407343 PRIMPOLQ96LW4 560 aa11.64□□□□□ -0.55
PTPN12-202ENST00000407343 PURBQ96QR8 312 aaKnown RBP11.64□□□□□ -0.55
PTPN12-202ENST00000407343 ZNF395Q9H8N7 513 aaPredicted RBP11.64□□□□□ -0.55
PTPN12-202ENST00000407343 CXXC1Q9P0U4 656 aaPredicted RBP11.64□□□□□ -0.55
PTPN12-202ENST00000407343 RBM19Q9Y4C8 960 aaKnown RBP11.64□□□□□ -0.55
PTPN12-202ENST00000407343 BACH1O14867 736 aa11.63□□□□□ -0.55
PTPN12-202ENST00000407343 GFRA3O60609 400 aa11.63□□□□□ -0.55
PTPN12-202ENST00000407343 SCNN1AP37088 669 aa11.63□□□□□ -0.55
PTPN12-202ENST00000407343 KCTD17Q8N5Z5 321 aa11.63□□□□□ -0.55
PTPN12-202ENST00000407343 GAS2L2Q8NHY3 880 aa11.63□□□□□ -0.55
PTPN12-202ENST00000407343 SCHIP1Q9P0W5 487 aaPredicted RBP11.63□□□□□ -0.55
PTPN12-202ENST00000407343 A6NJY4 79 aa11.62□□□□□ -0.55
PTPN12-202ENST00000407343 SPINT1O43278 529 aa11.62□□□□□ -0.55
PTPN12-202ENST00000407343 DGAT1O75907 488 aa11.62□□□□□ -0.55
PTPN12-202ENST00000407343 LINC00528Q8N1L1 170 aa11.62□□□□□ -0.55
PTPN12-202ENST00000407343 CRIPAKQ8N1N5 446 aa11.62□□□□□ -0.55
PTPN12-202ENST00000407343 C1orf216Q8TAB5 229 aa11.62□□□□□ -0.55
PTPN12-202ENST00000407343 HINFPQ9BQA5 517 aa11.62□□□□□ -0.55
PTPN12-202ENST00000407343 TSPAN10Q9H1Z9 355 aaPredicted RBP11.62□□□□□ -0.55
PTPN12-202ENST00000407343 CENPCQ03188 943 aa11.61□□□□□ -0.55
PTPN12-202ENST00000407343 TAS1R3Q7RTX0 852 aa11.61□□□□□ -0.55
PTPN12-202ENST00000407343 TRIM46Q7Z4K8 759 aa11.61□□□□□ -0.55
PTPN12-202ENST00000407343 TSEN34Q9BSV6 310 aaKnown RBP11.61□□□□□ -0.55
PTPN12-202ENST00000407343 FOXD4L5Q5VV16 416 aaPredicted RBP11.6□□□□□ -0.55
PTPN12-202ENST00000407343 POTEAQ6S8J7 498 aa11.6□□□□□ -0.55
PTPN12-202ENST00000407343 TXNDC2Q86VQ3 553 aa11.6□□□□□ -0.55
PTPN12-202ENST00000407343 AEBP1Q8IUX7 1158 aa11.6□□□□□ -0.55
PTPN12-202ENST00000407343 INSM2Q96T92 566 aaPredicted RBP11.6□□□□□ -0.55
PTPN12-202ENST00000407343 MEN1O00255 615 aa11.59□□□□□ -0.55
PTPN12-202ENST00000407343 IGFBP4P22692 258 aa11.59□□□□□ -0.55
PTPN12-202ENST00000407343 KCNA1Q09470 495 aa11.59□□□□□ -0.55
PTPN12-202ENST00000407343 FKBP5Q13451 457 aaPredicted RBP11.59□□□□□ -0.55
PTPN12-202ENST00000407343 TLR1Q15399 786 aa11.59□□□□□ -0.55
PTPN12-202ENST00000407343 MRPL14Q6P1L8 145 aaKnown RBP11.59□□□□□ -0.55
PTPN12-202ENST00000407343 CDK2AP1O14519 115 aa11.58□□□□□ -0.56
PTPN12-202ENST00000407343 BMP1P13497 986 aa11.58□□□□□ -0.56
PTPN12-202ENST00000407343 CTSOP43234 321 aaPredicted RBP11.58□□□□□ -0.56
PTPN12-202ENST00000407343 CTC1Q2NKJ3 1217 aa11.58□□□□□ -0.56
PTPN12-202ENST00000407343 TBCELQ5QJ74 424 aa11.58□□□□□ -0.56
PTPN12-202ENST00000407343 SLC9A9Q8IVB4 645 aa11.58□□□□□ -0.56
PTPN12-202ENST00000407343 GRIP2Q9C0E4 1043 aa11.58□□□□□ -0.56
PTPN12-202ENST00000407343 GNEQ9Y223 722 aaKnown RBP11.58□□□□□ -0.56
PTPN12-202ENST00000407343 ATAD2Q6PL18 1390 aa11.57□□□□□ -0.56
PTPN12-202ENST00000407343 RNF144AP50876 292 aaPredicted RBP11.57□□□□□ -0.56
PTPN12-202ENST00000407343 CAPN12Q6ZSI9 719 aa11.57□□□□□ -0.56
PTPN12-202ENST00000407343 SCG3Q8WXD2 468 aaKnown RBP11.57□□□□□ -0.56
PTPN12-202ENST00000407343 GPC1P35052 558 aa11.56□□□□□ -0.56
PTPN12-202ENST00000407343 PKDCCQ504Y2 493 aa11.56□□□□□ -0.56
PTPN12-202ENST00000407343 B4GALNT3Q6L9W6 998 aa11.56□□□□□ -0.56
PTPN12-202ENST00000407343 ZDHHC1Q8WTX9 485 aa11.56□□□□□ -0.56
PTPN12-202ENST00000407343 PPARGC1BQ86YN6 1023 aaKnown RBP11.55□□□□□ -0.56
PTPN12-202ENST00000407343 ST8SIA5O15466 376 aa11.54□□□□□ -0.56
PTPN12-202ENST00000407343 STAG2Q8N3U4 1231 aa11.54□□□□□ -0.56
PTPN12-202ENST00000407343 RNF217Q8TC41 542 aa11.54□□□□□ -0.56
PTPN12-202ENST00000407343 NLRP3Q96P20 1036 aa11.54□□□□□ -0.56
PTPN12-202ENST00000407343 C2orf49Q9BVC5 232 aaPredicted RBP11.54□□□□□ -0.56
PTPN12-202ENST00000407343 AAASQ9NRG9 546 aa11.54□□□□□ -0.56
PTPN12-202ENST00000407343 FOXO3O43524 673 aa11.53□□□□□ -0.56
PTPN12-202ENST00000407343 LAPTM4AQ15012 233 aa11.53□□□□□ -0.56
PTPN12-202ENST00000407343 C6orf118Q5T5N4 469 aa11.53□□□□□ -0.56
PTPN12-202ENST00000407343 SH3PXD2AQ5TCZ1 1133 aa11.53□□□□□ -0.56
PTPN12-202ENST00000407343 DACH1Q9UI36 760 aa11.53□□□□□ -0.56
PTPN12-202ENST00000407343 IVNS1ABPQ9Y6Y0 642 aa11.53□□□□□ -0.56
PTPN12-202ENST00000407343 AXIN1O15169 862 aa11.52□□□□□ -0.57
PTPN12-202ENST00000407343 ZSCAN10Q96SZ4 725 aaPredicted RBP11.52□□□□□ -0.57
PTPN12-202ENST00000407343 EML1O00423 815 aa11.51□□□□□ -0.57
PTPN12-202ENST00000407343 BMP2P12643 396 aa11.51□□□□□ -0.57
PTPN12-202ENST00000407343 COL26A1Q96A83 441 aa11.51□□□□□ -0.57
PTPN12-202ENST00000407343 SEPT3Q9UH03 358 aa11.51□□□□□ -0.57
PTPN12-202ENST00000407343 SOS2Q07890 1332 aaPredicted RBP11.51□□□□□ -0.57
PTPN12-202ENST00000407343 SPATA31C2B4DYI2 1134 aa11.5□□□□□ -0.57
PTPN12-202ENST00000407343 LCE2BO14633 110 aa11.5□□□□□ -0.57
PTPN12-202ENST00000407343 PPP1R12BO60237 982 aaPredicted RBP11.5□□□□□ -0.57
PTPN12-202ENST00000407343 HIRAP54198 1017 aaPredicted RBP11.5□□□□□ -0.57
PTPN12-202ENST00000407343 PSMA6P60900 246 aaKnown RBP11.5□□□□□ -0.57
PTPN12-202ENST00000407343 TEAD4Q15561 434 aa11.5□□□□□ -0.57
PTPN12-202ENST00000407343 ZFP42Q96MM3 310 aa11.5□□□□□ -0.57
PTPN12-202ENST00000407343 MKNK1Q9BUB5 465 aa11.5□□□□□ -0.57
PTPN12-202ENST00000407343 POLMQ9NP87 494 aaPredicted RBP11.5□□□□□ -0.57
PTPN12-202ENST00000407343 UPP2O95045 317 aa11.49□□□□□ -0.57
PTPN12-202ENST00000407343 ARID4AP29374 1257 aaPredicted RBP11.49□□□□□ -0.57
PTPN12-202ENST00000407343 SERPINB4P48594 390 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms