RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 RBM10P98175 930 aaKnown RBP14.04□□□□□ -0.16
SMCR8-201ENST00000406438 GRPEL1Q9HAV7 217 aa14.04□□□□□ -0.16
SMCR8-201ENST00000406438 UQCRHLA0A096LP55 91 aa14.04□□□□□ -0.16
SMCR8-201ENST00000406438 UQCRHP07919 91 aa14.04□□□□□ -0.16
SMCR8-201ENST00000406438 CRACR2BQ8N4Y2 399 aaPredicted RBP14.04□□□□□ -0.16
SMCR8-201ENST00000406438 GNAT3A8MTJ3 354 aa14.03□□□□□ -0.16
SMCR8-201ENST00000406438 METTL24Q5JXM2 366 aa14.03□□□□□ -0.16
SMCR8-201ENST00000406438 RAD54L2Q9Y4B4 1467 aa14.03□□□□□ -0.16
SMCR8-201ENST00000406438 CACNA2D4Q7Z3S7 1137 aa14.03□□□□□ -0.16
SMCR8-201ENST00000406438 FAM135AQ9P2D6 1515 aa14.03□□□□□ -0.16
SMCR8-201ENST00000406438 POLR3DP05423 398 aaPredicted RBP14.03□□□□□ -0.16
SMCR8-201ENST00000406438 GBP3Q9H0R5 595 aa14.03□□□□□ -0.16
SMCR8-201ENST00000406438 ERBINQ96RT1 1412 aa14.03□□□□□ -0.16
SMCR8-201ENST00000406438 CHMP4BP1P59074 171 aa14.02□□□□□ -0.16
SMCR8-201ENST00000406438 CFAP70Q5T0N1 1121 aa14.02□□□□□ -0.16
SMCR8-201ENST00000406438 KIF14Q15058 1648 aa14.02□□□□□ -0.16
SMCR8-201ENST00000406438 KIF5CO60282 957 aa14.02□□□□□ -0.16
SMCR8-201ENST00000406438 CDCA7LQ96GN5 454 aa14.02□□□□□ -0.16
SMCR8-201ENST00000406438 FEZ1Q99689 392 aa14.02□□□□□ -0.16
SMCR8-201ENST00000406438 CUL5Q93034 780 aa14.02□□□□□ -0.17
SMCR8-201ENST00000406438 PHAXQ9H814 394 aaKnown RBP14.02□□□□□ -0.17
SMCR8-201ENST00000406438 EHMT1Q9H9B1 1298 aa14.02□□□□□ -0.17
SMCR8-201ENST00000406438 RAB11FIP3O75154 756 aa14.02□□□□□ -0.17
SMCR8-201ENST00000406438 HOOK3Q86VS8 718 aa14.02□□□□□ -0.17
SMCR8-201ENST00000406438 CCDC113Q9H0I3 377 aa14.02□□□□□ -0.17
SMCR8-201ENST00000406438 POLA1P09884 1462 aaPredicted RBP14.02□□□□□ -0.17
SMCR8-201ENST00000406438 GCOM1H8Y6P7 765 aaPredicted RBP14.02□□□□□ -0.17
SMCR8-201ENST00000406438 MYZAPP0CAP1 466 aa14.02□□□□□ -0.17
SMCR8-201ENST00000406438 GOPCQ9HD26 462 aa14.02□□□□□ -0.17
SMCR8-201ENST00000406438 CABP1Q9NZU7 370 aa14.02□□□□□ -0.17
SMCR8-201ENST00000406438 POGZQ7Z3K3 1410 aa14.01□□□□□ -0.17
SMCR8-201ENST00000406438 KIF2AO00139 706 aaPredicted RBP14.01□□□□□ -0.17
SMCR8-201ENST00000406438 PPM1EQ8WY54 764 aa14.01□□□□□ -0.17
SMCR8-201ENST00000406438 AKNAQ7Z591 1439 aa14.01□□□□□ -0.17
SMCR8-201ENST00000406438 DZIP1Q86YF9 867 aaKnown RBP14.01□□□□□ -0.17
SMCR8-201ENST00000406438 DHX37Q8IY37 1157 aaKnown RBP14.01□□□□□ -0.17
SMCR8-201ENST00000406438 GSTTP1A0A1W2PQM5 241 aa14.01□□□□□ -0.17
SMCR8-201ENST00000406438 PIP4K2BP78356 416 aa14.01□□□□□ -0.17
SMCR8-201ENST00000406438 TMCO3Q6UWJ1 677 aa14.01□□□□□ -0.17
SMCR8-201ENST00000406438 TMEM266Q2M3C6 531 aa14.01□□□□□ -0.17
SMCR8-201ENST00000406438 FILIP1Q7Z7B0 1213 aa14.01□□□□□ -0.17
SMCR8-201ENST00000406438 MINDY4BA8MYZ0 360 aa14□□□□□ -0.17
SMCR8-201ENST00000406438 ZSCAN12O43309 604 aa14□□□□□ -0.17
SMCR8-201ENST00000406438 SLF2Q8IX21 1173 aa14□□□□□ -0.17
SMCR8-201ENST00000406438 UBXN4Q92575 508 aa14□□□□□ -0.17
SMCR8-201ENST00000406438 NAPBQ9H115 298 aa14□□□□□ -0.17
SMCR8-201ENST00000406438 ANKLE2Q86XL3 938 aa14□□□□□ -0.17
SMCR8-201ENST00000406438 TAOK3Q9H2K8 898 aa14□□□□□ -0.17
SMCR8-201ENST00000406438 GRIN2BQ13224 1484 aa14□□□□□ -0.17
SMCR8-201ENST00000406438 BICDL1Q6ZP65 573 aa14□□□□□ -0.17
SMCR8-201ENST00000406438 GIGYF2Q6Y7W6 1299 aaKnown RBP14□□□□□ -0.17
SMCR8-201ENST00000406438 SHTN1A0MZ66 631 aa14□□□□□ -0.17
SMCR8-201ENST00000406438 CCDC178Q5BJE1 867 aa14□□□□□ -0.17
SMCR8-201ENST00000406438 IFFO1Q0D2I5 559 aa14□□□□□ -0.17
SMCR8-201ENST00000406438 KIF1BPQ96EK5 621 aa13.99□□□□□ -0.17
SMCR8-201ENST00000406438 IQCA1Q86XH1 822 aa13.99□□□□□ -0.17
SMCR8-201ENST00000406438 SLC52A1Q9NWF4 448 aa13.99□□□□□ -0.17
SMCR8-201ENST00000406438 LUZP1Q86V48 1076 aa13.99□□□□□ -0.17
SMCR8-201ENST00000406438 FERMT2Q96AC1 680 aa13.99□□□□□ -0.17
SMCR8-201ENST00000406438 CIZ1Q9ULV3 898 aaPredicted RBP13.99□□□□□ -0.17
SMCR8-201ENST00000406438 CFTRP13569 1480 aa13.99□□□□□ -0.17
SMCR8-201ENST00000406438 A0A087WZG4 1122 aa13.99□□□□□ -0.17
SMCR8-201ENST00000406438 SFPQP23246 707 aaKnown RBP eCLIP13.99□□□□□ -0.17
SMCR8-201ENST00000406438 TTLL12Q14166 644 aaPredicted RBP13.99□□□□□ -0.17
SMCR8-201ENST00000406438 HMGB1P09429 215 aaKnown RBP13.99□□□□□ -0.17
SMCR8-201ENST00000406438 CETN1Q12798 172 aa13.99□□□□□ -0.17
SMCR8-201ENST00000406438 MYCNP04198 464 aaPredicted RBP13.98□□□□□ -0.17
SMCR8-201ENST00000406438 CEP63Q96MT8 703 aa13.98□□□□□ -0.17
SMCR8-201ENST00000406438 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.98□□□□□ -0.17
SMCR8-201ENST00000406438 UBA5Q9GZZ9 404 aa13.98□□□□□ -0.17
SMCR8-201ENST00000406438 KIAA1107Q9UPP5 1409 aa13.98□□□□□ -0.17
SMCR8-201ENST00000406438 DDX11Q96FC9 970 aa13.98□□□□□ -0.17
SMCR8-201ENST00000406438 SLC12A5Q9H2X9 1139 aa13.98□□□□□ -0.17
SMCR8-201ENST00000406438 ATAD2Q6PL18 1390 aa13.98□□□□□ -0.17
SMCR8-201ENST00000406438 PLEKHH1Q9ULM0 1364 aa13.98□□□□□ -0.17
SMCR8-201ENST00000406438 KLHL10Q6JEL2 608 aa13.98□□□□□ -0.17
SMCR8-201ENST00000406438 CTNNA2P26232 953 aa13.98□□□□□ -0.17
SMCR8-201ENST00000406438 LARP1Q6PKG0 1096 aaKnown RBP13.98□□□□□ -0.17
SMCR8-201ENST00000406438 CTNNBL1Q8WYA6 563 aaPredicted RBP13.98□□□□□ -0.17
SMCR8-201ENST00000406438 ZNF444Q8N0Y2 327 aaPredicted RBP13.98□□□□□ -0.17
SMCR8-201ENST00000406438 COMMD10Q9Y6G5 202 aa13.98□□□□□ -0.17
SMCR8-201ENST00000406438 CTCFLQ8NI51 663 aaPredicted RBP13.97□□□□□ -0.17
SMCR8-201ENST00000406438 IFIT1P09914 478 aaKnown RBP13.97□□□□□ -0.17
SMCR8-201ENST00000406438 PTPN14Q15678 1187 aa13.97□□□□□ -0.17
SMCR8-201ENST00000406438 KIF18AQ8NI77 898 aa13.97□□□□□ -0.17
SMCR8-201ENST00000406438 ANO10Q9NW15 660 aa13.97□□□□□ -0.17
SMCR8-201ENST00000406438 TMOD3Q9NYL9 352 aa13.97□□□□□ -0.17
SMCR8-201ENST00000406438 RRS1Q15050 365 aaKnown RBP13.97□□□□□ -0.17
SMCR8-201ENST00000406438 CAMK4Q16566 473 aa13.97□□□□□ -0.17
SMCR8-201ENST00000406438 MAP3K12Q12852 859 aa13.97□□□□□ -0.17
SMCR8-201ENST00000406438 KCNH5Q8NCM2 988 aa13.97□□□□□ -0.17
SMCR8-201ENST00000406438 RPGRQ92834 1020 aaKnown RBP13.97□□□□□ -0.17
SMCR8-201ENST00000406438 USO1O60763 962 aaKnown RBP13.97□□□□□ -0.17
SMCR8-201ENST00000406438 GLRX3O76003 335 aaKnown RBP13.97□□□□□ -0.17
SMCR8-201ENST00000406438 CCDC96Q2M329 555 aa13.97□□□□□ -0.17
SMCR8-201ENST00000406438 NUP88Q99567 741 aaPredicted RBP13.97□□□□□ -0.17
SMCR8-201ENST00000406438 FERMT1Q9BQL6 677 aa13.97□□□□□ -0.17
SMCR8-201ENST00000406438 PDCL2Q8N4E4 241 aa13.96□□□□□ -0.17
SMCR8-201ENST00000406438 MPNDQ8N594 471 aa13.96□□□□□ -0.17
SMCR8-201ENST00000406438 C8orf76Q96K31 380 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms