RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 GLYCTKQ8IVS8 523 aa7.84□□□□□ -1.15
HMGB3P18-201ENST00000406327 COL26A1Q96A83 441 aa7.84□□□□□ -1.15
HMGB3P18-201ENST00000406327 PRIMPOLQ96LW4 560 aa7.84□□□□□ -1.15
HMGB3P18-201ENST00000406327 RBM47A0AV96 593 aaKnown RBP7.83□□□□□ -1.16
HMGB3P18-201ENST00000406327 ERVH48-1M5A8F1 160 aa7.83□□□□□ -1.16
HMGB3P18-201ENST00000406327 WASLO00401 505 aaPredicted RBP7.83□□□□□ -1.16
HMGB3P18-201ENST00000406327 FOXO3O43524 673 aa7.83□□□□□ -1.16
HMGB3P18-201ENST00000406327 WEE1P30291 646 aa7.83□□□□□ -1.16
HMGB3P18-201ENST00000406327 MPNDQ8N594 471 aa7.83□□□□□ -1.16
HMGB3P18-201ENST00000406327 BCL11AQ9H165 835 aa7.83□□□□□ -1.16
HMGB3P18-201ENST00000406327 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.83□□□□□ -1.16
HMGB3P18-201ENST00000406327 H3BRB1 525 aa7.82□□□□□ -1.16
HMGB3P18-201ENST00000406327 C21orf2O43822 256 aa7.82□□□□□ -1.16
HMGB3P18-201ENST00000406327 ICMTO60725 284 aa7.82□□□□□ -1.16
HMGB3P18-201ENST00000406327 IGFBP4P22692 258 aa7.82□□□□□ -1.16
HMGB3P18-201ENST00000406327 CYP2U1Q7Z449 544 aa7.82□□□□□ -1.16
HMGB3P18-201ENST00000406327 GAS2L2Q8NHY3 880 aa7.82□□□□□ -1.16
HMGB3P18-201ENST00000406327 CDK15Q96Q40 435 aa7.82□□□□□ -1.16
HMGB3P18-201ENST00000406327 TUT1Q9H6E5 874 aaKnown RBP7.82□□□□□ -1.16
HMGB3P18-201ENST00000406327 ZNF358Q9NW07 568 aa7.82□□□□□ -1.16
HMGB3P18-201ENST00000406327 FSHRP23945 695 aa7.81□□□□□ -1.16
HMGB3P18-201ENST00000406327 ARID5BQ14865 1188 aa7.81□□□□□ -1.16
HMGB3P18-201ENST00000406327 ESCO1Q5FWF5 840 aa7.81□□□□□ -1.16
HMGB3P18-201ENST00000406327 DNAJC14Q6Y2X3 702 aaPredicted RBP7.81□□□□□ -1.16
HMGB3P18-201ENST00000406327 TSEN2Q8NCE0 465 aaKnown RBP7.81□□□□□ -1.16
HMGB3P18-201ENST00000406327 VTI1AQ96AJ9 217 aa7.81□□□□□ -1.16
HMGB3P18-201ENST00000406327 ZNF428Q96B54 188 aa7.81□□□□□ -1.16
HMGB3P18-201ENST00000406327 LOC100996750A0A140TA64 210 aa7.8□□□□□ -1.16
HMGB3P18-201ENST00000406327 FAM181BA6NEQ2 426 aa7.8□□□□□ -1.16
HMGB3P18-201ENST00000406327 TERTO14746 1132 aaKnown RBP7.8□□□□□ -1.16
HMGB3P18-201ENST00000406327 GDF10P55107 478 aa7.8□□□□□ -1.16
HMGB3P18-201ENST00000406327 SKOR1P84550 965 aa7.8□□□□□ -1.16
HMGB3P18-201ENST00000406327 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.8□□□□□ -1.16
HMGB3P18-201ENST00000406327 KRTAP4-6Q9BYQ5 205 aa7.8□□□□□ -1.16
HMGB3P18-201ENST00000406327 SCTRP47872 440 aa7.79□□□□□ -1.16
HMGB3P18-201ENST00000406327 FKBP4Q02790 459 aaKnown RBP eCLIP7.79□□□□□ -1.16
HMGB3P18-201ENST00000406327 NR5A1Q13285 461 aa7.79□□□□□ -1.16
HMGB3P18-201ENST00000406327 ZNF211Q13398 564 aaPredicted RBP7.79□□□□□ -1.16
HMGB3P18-201ENST00000406327 RC3H1Q5TC82 1133 aaKnown RBP7.79□□□□□ -1.16
HMGB3P18-201ENST00000406327 CCDC116Q8IYX3 515 aa7.79□□□□□ -1.16
HMGB3P18-201ENST00000406327 GTF3C2Q8WUA4 911 aaPredicted RBP7.79□□□□□ -1.16
HMGB3P18-201ENST00000406327 ADH1CP00326 375 aa7.78□□□□□ -1.16
HMGB3P18-201ENST00000406327 GNRH1P01148 92 aa7.78□□□□□ -1.16
HMGB3P18-201ENST00000406327 FKBP5Q13451 457 aaPredicted RBP7.78□□□□□ -1.16
HMGB3P18-201ENST00000406327 LCE2CQ5TA81 110 aa7.78□□□□□ -1.16
HMGB3P18-201ENST00000406327 ZSCAN29Q8IWY8 852 aaPredicted RBP7.78□□□□□ -1.16
HMGB3P18-201ENST00000406327 MKNK1Q9BUB5 465 aa7.78□□□□□ -1.16
HMGB3P18-201ENST00000406327 BCL2L13Q9BXK5 485 aa7.78□□□□□ -1.16
HMGB3P18-201ENST00000406327 OSBPL3Q9H4L5 887 aa7.78□□□□□ -1.16
HMGB3P18-201ENST00000406327 PGPEP1Q9NXJ5 209 aa7.78□□□□□ -1.16
HMGB3P18-201ENST00000406327 TTC24A2A3L6 582 aaPredicted RBP7.77□□□□□ -1.17
HMGB3P18-201ENST00000406327 TMEM229AB2RXF0 380 aa7.77□□□□□ -1.17
HMGB3P18-201ENST00000406327 INHAP05111 366 aa7.77□□□□□ -1.17
HMGB3P18-201ENST00000406327 ZNF326Q5BKZ1 582 aaKnown RBP7.77□□□□□ -1.17
HMGB3P18-201ENST00000406327 HELQQ8TDG4 1101 aa7.77□□□□□ -1.17
HMGB3P18-201ENST00000406327 SENP2Q9HC62 589 aa7.77□□□□□ -1.17
HMGB3P18-201ENST00000406327 ATP13A2Q9NQ11 1180 aa7.77□□□□□ -1.17
HMGB3P18-201ENST00000406327 CYLDQ9NQC7 956 aa7.77□□□□□ -1.17
HMGB3P18-201ENST00000406327 DCTN4Q9UJW0 460 aa7.77□□□□□ -1.17
HMGB3P18-201ENST00000406327 CHMP3Q9Y3E7 222 aa7.77□□□□□ -1.17
HMGB3P18-201ENST00000406327 FAM13AO94988 1023 aa7.76□□□□□ -1.17
HMGB3P18-201ENST00000406327 SNRPBP14678 240 aaKnown RBP7.76□□□□□ -1.17
HMGB3P18-201ENST00000406327 MAPK1P28482 360 aa7.76□□□□□ -1.17
HMGB3P18-201ENST00000406327 SCNN1AP37088 669 aa7.76□□□□□ -1.17
HMGB3P18-201ENST00000406327 SCNN1DP51172 638 aa7.76□□□□□ -1.17
HMGB3P18-201ENST00000406327 ZNF784Q8NCA9 323 aaPredicted RBP7.76□□□□□ -1.17
HMGB3P18-201ENST00000406327 SCG3Q8WXD2 468 aaKnown RBP7.76□□□□□ -1.17
HMGB3P18-201ENST00000406327 EMILIN1Q9Y6C2 1016 aa7.76□□□□□ -1.17
HMGB3P18-201ENST00000406327 ANKRD33BA6NCL7 494 aa7.75□□□□□ -1.17
HMGB3P18-201ENST00000406327 COL19A1Q14993 1142 aa7.75□□□□□ -1.17
HMGB3P18-201ENST00000406327 STAG2Q8N3U4 1231 aa7.75□□□□□ -1.17
HMGB3P18-201ENST00000406327 TRIM47Q96LD4 638 aa7.75□□□□□ -1.17
HMGB3P18-201ENST00000406327 SLC4A9Q96Q91 983 aa7.75□□□□□ -1.17
HMGB3P18-201ENST00000406327 SEPT3Q9UH03 358 aa7.75□□□□□ -1.17
HMGB3P18-201ENST00000406327 DNMT3AQ9Y6K1 912 aaPredicted RBP7.75□□□□□ -1.17
HMGB3P18-201ENST00000406327 ATAD2Q6PL18 1390 aa7.74□□□□□ -1.17
HMGB3P18-201ENST00000406327 WNT7AO00755 349 aa7.74□□□□□ -1.17
HMGB3P18-201ENST00000406327 GRM5P41594 1212 aa7.74□□□□□ -1.17
HMGB3P18-201ENST00000406327 PPP1R26Q5T8A7 1209 aaPredicted RBP7.74□□□□□ -1.17
HMGB3P18-201ENST00000406327 NBPF15Q8N660 670 aa7.74□□□□□ -1.17
HMGB3P18-201ENST00000406327 ASB16Q96NS5 453 aa7.74□□□□□ -1.17
HMGB3P18-201ENST00000406327 ANO2Q9NQ90 1003 aa7.74□□□□□ -1.17
HMGB3P18-201ENST00000406327 TMPRSS4Q9NRS4 437 aa7.74□□□□□ -1.17
HMGB3P18-201ENST00000406327 TLL2Q9Y6L7 1015 aa7.74□□□□□ -1.17
HMGB3P18-201ENST00000406327 PPP1R12BO60237 982 aaPredicted RBP7.73□□□□□ -1.17
HMGB3P18-201ENST00000406327 NPAS4Q8IUM7 802 aa7.73□□□□□ -1.17
HMGB3P18-201ENST00000406327 TNS4Q8IZW8 715 aa7.73□□□□□ -1.17
HMGB3P18-201ENST00000406327 ETNK1Q9HBU6 452 aa7.73□□□□□ -1.17
HMGB3P18-201ENST00000406327 NDUFB5O43674 189 aa7.72□□□□□ -1.17
HMGB3P18-201ENST00000406327 LGR5O75473 907 aa7.72□□□□□ -1.17
HMGB3P18-201ENST00000406327 ZNF16P17020 682 aaPredicted RBP7.72□□□□□ -1.17
HMGB3P18-201ENST00000406327 NPR3P17342 541 aa7.72□□□□□ -1.17
HMGB3P18-201ENST00000406327 EPHA4P54764 986 aa7.72□□□□□ -1.17
HMGB3P18-201ENST00000406327 PSMA6P60900 246 aaKnown RBP7.72□□□□□ -1.17
HMGB3P18-201ENST00000406327 ALKBH2Q6NS38 261 aa7.72□□□□□ -1.17
HMGB3P18-201ENST00000406327 C16orf46Q6P387 395 aa7.72□□□□□ -1.17
HMGB3P18-201ENST00000406327 SNIP1Q8TAD8 396 aaKnown RBP7.72□□□□□ -1.17
HMGB3P18-201ENST00000406327 GIPC2Q8TF65 315 aa7.72□□□□□ -1.17
HMGB3P18-201ENST00000406327 KIFC2Q96AC6 838 aa7.72□□□□□ -1.17
HMGB3P18-201ENST00000406327 TSPAN10Q9H1Z9 355 aaPredicted RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms