RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 HSP90AB1P08238 724 aaKnown RBP12.2□□□□□ -0.46
MSH2-202ENST00000406134 PKNOX2Q96KN3 472 aa12.2□□□□□ -0.46
MSH2-202ENST00000406134 ESF1Q9H501 851 aaKnown RBP12.2□□□□□ -0.46
MSH2-202ENST00000406134 TSPYL4Q9UJ04 414 aa12.2□□□□□ -0.46
MSH2-202ENST00000406134 C5P01031 1676 aa12.2□□□□□ -0.46
MSH2-202ENST00000406134 NCAPD2Q15021 1401 aa12.2□□□□□ -0.46
MSH2-202ENST00000406134 TCHHQ07283 1943 aa12.2□□□□□ -0.46
MSH2-202ENST00000406134 IBTKQ9P2D0 1353 aaPredicted RBP12.19□□□□□ -0.46
MSH2-202ENST00000406134 PDE1AP54750 535 aa12.19□□□□□ -0.46
MSH2-202ENST00000406134 TSHZ3Q63HK5 1081 aa12.19□□□□□ -0.46
MSH2-202ENST00000406134 IL25Q9H293 177 aa12.19□□□□□ -0.46
MSH2-202ENST00000406134 ERBB4Q15303 1308 aa12.19□□□□□ -0.46
MSH2-202ENST00000406134 MAP3K5Q99683 1374 aa12.19□□□□□ -0.46
MSH2-202ENST00000406134 KCNA6P17658 529 aa12.18□□□□□ -0.46
MSH2-202ENST00000406134 RABEP1Q15276 862 aa12.18□□□□□ -0.46
MSH2-202ENST00000406134 PXDNQ92626 1479 aa12.18□□□□□ -0.46
MSH2-202ENST00000406134 ZGPATQ8N5A5 531 aaKnown RBP12.18□□□□□ -0.46
MSH2-202ENST00000406134 IL17RAQ96F46 866 aa12.18□□□□□ -0.46
MSH2-202ENST00000406134 GRPEL1Q9HAV7 217 aa12.18□□□□□ -0.46
MSH2-202ENST00000406134 APBB1O00213 710 aa12.17□□□□□ -0.46
MSH2-202ENST00000406134 HTATSF1O43719 755 aaKnown RBP12.17□□□□□ -0.46
MSH2-202ENST00000406134 BAG4O95429 457 aaKnown RBP12.17□□□□□ -0.46
MSH2-202ENST00000406134 FLIIQ13045 1269 aa12.17□□□□□ -0.46
MSH2-202ENST00000406134 CCT4P50991 539 aaKnown RBP12.17□□□□□ -0.46
MSH2-202ENST00000406134 ARXQ96QS3 562 aa12.17□□□□□ -0.46
MSH2-202ENST00000406134 EXOC6BQ9Y2D4 811 aa12.17□□□□□ -0.46
MSH2-202ENST00000406134 SLIT3O75094 1523 aa12.17□□□□□ -0.46
MSH2-202ENST00000406134 UNC5CLQ8IV45 518 aa12.17□□□□□ -0.46
MSH2-202ENST00000406134 MRE11P49959 708 aa12.16□□□□□ -0.46
MSH2-202ENST00000406134 HAP1P54257 671 aaPredicted RBP12.16□□□□□ -0.46
MSH2-202ENST00000406134 NUTM2GQ5VZR2 741 aa12.16□□□□□ -0.46
MSH2-202ENST00000406134 CHAMP1Q96JM3 812 aa12.16□□□□□ -0.46
MSH2-202ENST00000406134 USP44Q9H0E7 712 aa12.16□□□□□ -0.46
MSH2-202ENST00000406134 PALD1Q9ULE6 856 aa12.16□□□□□ -0.46
MSH2-202ENST00000406134 GNAT3A8MTJ3 354 aa12.15□□□□□ -0.46
MSH2-202ENST00000406134 SLC4A10Q6U841 1118 aa12.15□□□□□ -0.46
MSH2-202ENST00000406134 SCN11AQ9UI33 1791 aa12.15□□□□□ -0.46
MSH2-202ENST00000406134 LMBRD1Q9NUN5 540 aa12.15□□□□□ -0.47
MSH2-202ENST00000406134 ALS2Q96Q42 1657 aa12.14□□□□□ -0.47
MSH2-202ENST00000406134 ATP8B2P98198 1209 aa12.14□□□□□ -0.47
MSH2-202ENST00000406134 PHAXQ9H814 394 aaKnown RBP12.14□□□□□ -0.47
MSH2-202ENST00000406134 STAP2Q9UGK3 403 aa12.14□□□□□ -0.47
MSH2-202ENST00000406134 GNAI2P04899 355 aa12.14□□□□□ -0.47
MSH2-202ENST00000406134 USHBP1Q8N6Y0 703 aa12.14□□□□□ -0.47
MSH2-202ENST00000406134 NGDNQ8NEJ9 315 aaKnown RBP12.14□□□□□ -0.47
MSH2-202ENST00000406134 AMPHP49418 695 aa12.13□□□□□ -0.47
MSH2-202ENST00000406134 NECTIN2Q92692 538 aa12.13□□□□□ -0.47
MSH2-202ENST00000406134 EID1Q9Y6B2 187 aa12.13□□□□□ -0.47
MSH2-202ENST00000406134 GLI3P10071 1580 aa12.13□□□□□ -0.47
MSH2-202ENST00000406134 NLRP6P59044 892 aa12.13□□□□□ -0.47
MSH2-202ENST00000406134 GBP4Q96PP9 640 aa12.13□□□□□ -0.47
MSH2-202ENST00000406134 RTF1Q92541 710 aaKnown RBP12.13□□□□□ -0.47
MSH2-202ENST00000406134 ESYT1Q9BSJ8 1104 aa12.13□□□□□ -0.47
MSH2-202ENST00000406134 LRRFIP2Q9Y608 721 aaKnown RBP12.13□□□□□ -0.47
MSH2-202ENST00000406134 ERC2O15083 957 aa12.12□□□□□ -0.47
MSH2-202ENST00000406134 POLA2Q14181 598 aa12.12□□□□□ -0.47
MSH2-202ENST00000406134 KLHL40Q2TBA0 621 aa12.12□□□□□ -0.47
MSH2-202ENST00000406134 ADCY9O60503 1353 aa12.12□□□□□ -0.47
MSH2-202ENST00000406134 LMTK3Q96Q04 1460 aa12.12□□□□□ -0.47
MSH2-202ENST00000406134 ADAMTSL3P82987 1691 aa12.12□□□□□ -0.47
MSH2-202ENST00000406134 GPT2Q8TD30 523 aa12.12□□□□□ -0.47
MSH2-202ENST00000406134 ISY1Q9ULR0 285 aaKnown RBP12.12□□□□□ -0.47
MSH2-202ENST00000406134 COL18A1P39060 1754 aa12.11□□□□□ -0.47
MSH2-202ENST00000406134 CHMLP26374 656 aa12.11□□□□□ -0.47
MSH2-202ENST00000406134 SSH3Q8TE77 659 aa12.11□□□□□ -0.47
MSH2-202ENST00000406134 BABAM1Q9NWV8 329 aa12.11□□□□□ -0.47
MSH2-202ENST00000406134 SOS1Q07889 1333 aaPredicted RBP12.11□□□□□ -0.47
MSH2-202ENST00000406134 KCNQ3O43525 872 aa12.11□□□□□ -0.47
MSH2-202ENST00000406134 CCDC30Q5VVM6 783 aa12.11□□□□□ -0.47
MSH2-202ENST00000406134 NBPF6Q5VWK0 638 aa12.11□□□□□ -0.47
MSH2-202ENST00000406134 PI4K2BQ8TCG2 481 aa12.11□□□□□ -0.47
MSH2-202ENST00000406134 NBPF4Q96M43 638 aa12.11□□□□□ -0.47
MSH2-202ENST00000406134 LGR6Q9HBX8 967 aa12.11□□□□□ -0.47
MSH2-202ENST00000406134 HEG1Q9ULI3 1381 aa12.11□□□□□ -0.47
MSH2-202ENST00000406134 MX1P20591 662 aa12.11□□□□□ -0.47
MSH2-202ENST00000406134 PODXL2Q9NZ53 605 aa12.11□□□□□ -0.47
MSH2-202ENST00000406134 NSFL1CQ9UNZ2 370 aaKnown RBP12.11□□□□□ -0.47
MSH2-202ENST00000406134 FKBP5Q13451 457 aaPredicted RBP12.1□□□□□ -0.47
MSH2-202ENST00000406134 TAF7Q15545 349 aaPredicted RBP12.1□□□□□ -0.47
MSH2-202ENST00000406134 LRRCC1Q9C099 1032 aa12.1□□□□□ -0.47
MSH2-202ENST00000406134 EIF4A1P60842 406 aaKnown RBP12.1□□□□□ -0.47
MSH2-202ENST00000406134 HMMRO75330 724 aa12.1□□□□□ -0.47
MSH2-202ENST00000406134 CLCN1P35523 988 aa12.1□□□□□ -0.47
MSH2-202ENST00000406134 CUL4AQ13619 759 aa12.1□□□□□ -0.47
MSH2-202ENST00000406134 SKOR2Q2VWA4 1001 aaPredicted RBP12.09□□□□□ -0.47
MSH2-202ENST00000406134 ADGRL3Q9HAR2 1447 aa12.09□□□□□ -0.47
MSH2-202ENST00000406134 ZNF445P59923 1031 aa12.09□□□□□ -0.47
MSH2-202ENST00000406134 THEMISQ8N1K5 641 aaPredicted RBP12.09□□□□□ -0.47
MSH2-202ENST00000406134 ABTB2Q8N961 1025 aa12.09□□□□□ -0.47
MSH2-202ENST00000406134 STRCP1A6NGW2 1772 aa12.08□□□□□ -0.47
MSH2-202ENST00000406134 REC8O95072 547 aa12.08□□□□□ -0.48
MSH2-202ENST00000406134 NBPF7P0C2Y1 421 aaPredicted RBP12.08□□□□□ -0.48
MSH2-202ENST00000406134 IP6K1Q92551 441 aa12.08□□□□□ -0.48
MSH2-202ENST00000406134 AOX1Q06278 1338 aa12.08□□□□□ -0.48
MSH2-202ENST00000406134 OVOS2A0A0G2JMS6 1433 aa12.08□□□□□ -0.48
MSH2-202ENST00000406134 BEND3Q5T5X7 828 aa12.08□□□□□ -0.48
MSH2-202ENST00000406134 TMX3Q96JJ7 454 aa12.08□□□□□ -0.48
MSH2-202ENST00000406134 AFDNP55196 1824 aaKnown RBP12.07□□□□□ -0.48
MSH2-202ENST00000406134 GNAI3P08754 354 aa12.07□□□□□ -0.48
MSH2-202ENST00000406134 MCTP1Q6DN14 999 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms