RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 MYO1CO00159 1063 aa16.65■□□□□ 0.26
DUSP28-202ENST00000405954 CTIFO43310 598 aaKnown RBP16.65■□□□□ 0.26
DUSP28-202ENST00000405954 DHX16O60231 1041 aaKnown RBP16.65■□□□□ 0.26
DUSP28-202ENST00000405954 SLU7O95391 586 aaKnown RBP16.65■□□□□ 0.26
DUSP28-202ENST00000405954 CABP2Q9NPB3 220 aa16.64■□□□□ 0.25
DUSP28-202ENST00000405954 LUZP1Q86V48 1076 aa16.64■□□□□ 0.25
DUSP28-202ENST00000405954 ASXL1Q8IXJ9 1541 aa16.64■□□□□ 0.25
DUSP28-202ENST00000405954 CCDC34Q96HJ3 373 aa16.64■□□□□ 0.25
DUSP28-202ENST00000405954 LARP6Q9BRS8 491 aaKnown RBP16.64■□□□□ 0.25
DUSP28-202ENST00000405954 ARHGAP29Q52LW3 1261 aa16.63■□□□□ 0.25
DUSP28-202ENST00000405954 ZNF526Q8TF50 670 aaPredicted RBP16.63■□□□□ 0.25
DUSP28-202ENST00000405954 SYTL4Q96C24 671 aaPredicted RBP16.63■□□□□ 0.25
DUSP28-202ENST00000405954 VGFO15240 615 aaPredicted RBP16.63■□□□□ 0.25
DUSP28-202ENST00000405954 SMC3Q9UQE7 1217 aa16.63■□□□□ 0.25
DUSP28-202ENST00000405954 ZDHHC9Q9Y397 364 aa16.63■□□□□ 0.25
DUSP28-202ENST00000405954 RTEL1-TNFRSF6BF6WH68 1400 aa16.62■□□□□ 0.25
DUSP28-202ENST00000405954 NSD3Q9BZ95 1437 aa16.62■□□□□ 0.25
DUSP28-202ENST00000405954 TDO2P48775 406 aa16.62■□□□□ 0.25
DUSP28-202ENST00000405954 ERCC6LQ2NKX8 1250 aa16.62■□□□□ 0.25
DUSP28-202ENST00000405954 ATP10AO60312 1499 aa16.62■□□□□ 0.25
DUSP28-202ENST00000405954 MAST1Q9Y2H9 1570 aa16.62■□□□□ 0.25
DUSP28-202ENST00000405954 A0A1B0GUL7 405 aa16.62■□□□□ 0.25
DUSP28-202ENST00000405954 ERC2O15083 957 aa16.62■□□□□ 0.25
DUSP28-202ENST00000405954 NRBP1Q9UHY1 535 aa16.62■□□□□ 0.25
DUSP28-202ENST00000405954 JRKLQ9Y4A0 524 aa16.62■□□□□ 0.25
DUSP28-202ENST00000405954 SCAF11Q99590 1463 aaKnown RBP16.62■□□□□ 0.25
DUSP28-202ENST00000405954 MCM2P49736 904 aa16.61■□□□□ 0.25
DUSP28-202ENST00000405954 FAM177A1Q8N128 213 aaPredicted RBP16.61■□□□□ 0.25
DUSP28-202ENST00000405954 ERO1AQ96HE7 468 aa16.61■□□□□ 0.25
DUSP28-202ENST00000405954 USP26Q9BXU7 913 aa16.61■□□□□ 0.25
DUSP28-202ENST00000405954 KCNF1Q9H3M0 494 aa16.61■□□□□ 0.25
DUSP28-202ENST00000405954 GEMIN8Q9NWZ8 242 aaKnown RBP16.61■□□□□ 0.25
DUSP28-202ENST00000405954 DTNBO60941 627 aa16.61■□□□□ 0.25
DUSP28-202ENST00000405954 BICD2Q8TD16 824 aa16.61■□□□□ 0.25
DUSP28-202ENST00000405954 TNMDQ9H2S6 317 aa16.61■□□□□ 0.25
DUSP28-202ENST00000405954 GGNBP2Q9H3C7 697 aa16.61■□□□□ 0.25
DUSP28-202ENST00000405954 ZBTB40Q9NUA8 1239 aa16.61■□□□□ 0.25
DUSP28-202ENST00000405954 ZNF622Q969S3 477 aaKnown RBP eCLIP16.6■□□□□ 0.25
DUSP28-202ENST00000405954 CYP2C19P33261 490 aa16.6■□□□□ 0.25
DUSP28-202ENST00000405954 UBE2HP62256 183 aa16.6■□□□□ 0.25
DUSP28-202ENST00000405954 MAP3K11Q16584 847 aa16.6■□□□□ 0.25
DUSP28-202ENST00000405954 RNF20Q5VTR2 975 aa16.6■□□□□ 0.25
DUSP28-202ENST00000405954 CREBRFQ8IUR6 639 aa16.6■□□□□ 0.25
DUSP28-202ENST00000405954 C16orf71Q8IYS4 520 aaPredicted RBP16.6■□□□□ 0.25
DUSP28-202ENST00000405954 UNC13BO14795 1591 aa16.6■□□□□ 0.25
DUSP28-202ENST00000405954 SKILP12757 684 aa16.6■□□□□ 0.25
DUSP28-202ENST00000405954 IBSPP21815 317 aaPredicted RBP16.6■□□□□ 0.25
DUSP28-202ENST00000405954 NUP62CLQ9H1M0 184 aa16.6■□□□□ 0.25
DUSP28-202ENST00000405954 MNAT1P51948 309 aa16.59■□□□□ 0.25
DUSP28-202ENST00000405954 FAM69CQ0P6D2 419 aa16.59■□□□□ 0.25
DUSP28-202ENST00000405954 CLTCL1P53675 1640 aa16.59■□□□□ 0.25
DUSP28-202ENST00000405954 IQGAP3Q86VI3 1631 aa16.59■□□□□ 0.25
DUSP28-202ENST00000405954 MADDQ8WXG6 1647 aa16.58■□□□□ 0.25
DUSP28-202ENST00000405954 PRR29P0C7W0 189 aa16.58■□□□□ 0.24
DUSP28-202ENST00000405954 SETQ01105 290 aaPredicted RBP16.58■□□□□ 0.24
DUSP28-202ENST00000405954 DUOX2Q9NRD8 1548 aa16.58■□□□□ 0.24
DUSP28-202ENST00000405954 SOX12O15370 315 aa16.58■□□□□ 0.24
DUSP28-202ENST00000405954 CYP2E1P05181 493 aaPredicted RBP16.58■□□□□ 0.24
DUSP28-202ENST00000405954 FAM200AQ8TCP9 573 aa16.58■□□□□ 0.24
DUSP28-202ENST00000405954 NCAPGQ9BPX3 1015 aa16.58■□□□□ 0.24
DUSP28-202ENST00000405954 TULP2O00295 520 aa16.57■□□□□ 0.24
DUSP28-202ENST00000405954 BRD1O95696 1058 aa16.57■□□□□ 0.24
DUSP28-202ENST00000405954 SYCP1Q15431 976 aa16.57■□□□□ 0.24
DUSP28-202ENST00000405954 ZCCHC17Q9NP64 241 aaKnown RBP16.57■□□□□ 0.24
DUSP28-202ENST00000405954 ANKRD65E5RJM6 399 aa16.57■□□□□ 0.24
DUSP28-202ENST00000405954 RRP15Q9Y3B9 282 aaKnown RBP16.57■□□□□ 0.24
DUSP28-202ENST00000405954 ANKRD36BQ8N2N9 1353 aa16.57■□□□□ 0.24
DUSP28-202ENST00000405954 URI1O94763 535 aaPredicted RBP16.56■□□□□ 0.24
DUSP28-202ENST00000405954 CCDC91Q7Z6B0 441 aa16.56■□□□□ 0.24
DUSP28-202ENST00000405954 FERMT3Q86UX7 667 aa16.56■□□□□ 0.24
DUSP28-202ENST00000405954 EIF2AK4Q9P2K8 1649 aaKnown RBP16.56■□□□□ 0.24
DUSP28-202ENST00000405954 ERVK-7P63135 1459 aa16.56■□□□□ 0.24
DUSP28-202ENST00000405954 NOS1P29475 1434 aa16.56■□□□□ 0.24
DUSP28-202ENST00000405954 CASTP20810 708 aaKnown RBP16.56■□□□□ 0.24
DUSP28-202ENST00000405954 ZSCAN25Q6NSZ9 544 aa16.56■□□□□ 0.24
DUSP28-202ENST00000405954 ANO6Q4KMQ2 910 aa16.55■□□□□ 0.24
DUSP28-202ENST00000405954 DNAAF4Q8WXU2 420 aa16.55■□□□□ 0.24
DUSP28-202ENST00000405954 SNW1Q13573 536 aaKnown RBP16.55■□□□□ 0.24
DUSP28-202ENST00000405954 CCDC171Q6TFL3 1326 aa16.55■□□□□ 0.24
DUSP28-202ENST00000405954 SDSP20132 328 aa16.55■□□□□ 0.24
DUSP28-202ENST00000405954 OAS2P29728 719 aaKnown RBP16.55■□□□□ 0.24
DUSP28-202ENST00000405954 ZNF165P49910 485 aa16.54■□□□□ 0.24
DUSP28-202ENST00000405954 SRCIN1Q9C0H9 1055 aa16.54■□□□□ 0.24
DUSP28-202ENST00000405954 YY1AP1Q9H869 796 aa16.54■□□□□ 0.24
DUSP28-202ENST00000405954 HSP90B2PQ58FF3 399 aa16.54■□□□□ 0.24
DUSP28-202ENST00000405954 THUMPD2Q9BTF0 503 aaKnown RBP16.54■□□□□ 0.24
DUSP28-202ENST00000405954 RBM6P78332 1123 aaKnown RBP16.54■□□□□ 0.24
DUSP28-202ENST00000405954 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.54■□□□□ 0.24
DUSP28-202ENST00000405954 MYOM1P52179 1685 aa16.53■□□□□ 0.24
DUSP28-202ENST00000405954 TTC22Q5TAA0 569 aa16.53■□□□□ 0.24
DUSP28-202ENST00000405954 ANKRD20A12PQ8NF67 263 aa16.53■□□□□ 0.24
DUSP28-202ENST00000405954 PLCH2O75038 1416 aa16.53■□□□□ 0.24
DUSP28-202ENST00000405954 RAPGEF3O95398 923 aa16.53■□□□□ 0.24
DUSP28-202ENST00000405954 CT47A1Q5JQC4 288 aaPredicted RBP16.53■□□□□ 0.24
DUSP28-202ENST00000405954 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.53■□□□□ 0.24
DUSP28-202ENST00000405954 MINK1Q8N4C8 1332 aaPredicted RBP16.52■□□□□ 0.24
DUSP28-202ENST00000405954 MICALL1Q8N3F8 863 aa16.52■□□□□ 0.24
DUSP28-202ENST00000405954 SLC52A1Q9NWF4 448 aa16.52■□□□□ 0.24
DUSP28-202ENST00000405954 PIK3C2GO75747 1445 aa16.52■□□□□ 0.24
DUSP28-202ENST00000405954 ST5P78524 1137 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms