RNA–Protein interactions for RNA: ENST00000405581.3

NRXN1-209, Transcript of neurexin 1, humanhuman

TSL 1 (best) BASIC

Gene NRXN1, Length 5,078 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-209ENST00000405581 SLFN5Q08AF3 891 aa20.31■□□□□ 0.84
NRXN1-209ENST00000405581 TAF7Q15545 349 aaPredicted RBP20.31■□□□□ 0.84
NRXN1-209ENST00000405581 LEKR1Q6ZMV7 388 aa20.31■□□□□ 0.84
NRXN1-209ENST00000405581 SPC24Q8NBT2 197 aa20.31■□□□□ 0.84
NRXN1-209ENST00000405581 UPF3BQ9BZI7 483 aaKnown RBP20.31■□□□□ 0.84
NRXN1-209ENST00000405581 CD109Q6YHK3 1445 aa20.3■□□□□ 0.84
NRXN1-209ENST00000405581 WDHD1O75717 1129 aaPredicted RBP20.3■□□□□ 0.84
NRXN1-209ENST00000405581 ZPR1O75312 459 aa20.3■□□□□ 0.84
NRXN1-209ENST00000405581 KIF14Q15058 1648 aa20.3■□□□□ 0.84
NRXN1-209ENST00000405581 EIF3JO75822 258 aaKnown RBP20.29■□□□□ 0.84
NRXN1-209ENST00000405581 POTEJP0CG39 1038 aa20.29■□□□□ 0.84
NRXN1-209ENST00000405581 TSPYL1Q9H0U9 437 aa20.29■□□□□ 0.84
NRXN1-209ENST00000405581 SEC63Q9UGP8 760 aaKnown RBP20.29■□□□□ 0.84
NRXN1-209ENST00000405581 MX1P20591 662 aa20.29■□□□□ 0.84
NRXN1-209ENST00000405581 BICDL1Q6ZP65 573 aa20.29■□□□□ 0.84
NRXN1-209ENST00000405581 PHAXQ9H814 394 aaKnown RBP20.28■□□□□ 0.84
NRXN1-209ENST00000405581 HMGB1P09429 215 aaKnown RBP20.28■□□□□ 0.84
NRXN1-209ENST00000405581 CETN2P41208 172 aa20.28■□□□□ 0.84
NRXN1-209ENST00000405581 TMEM57Q8N5G2 664 aa20.28■□□□□ 0.84
NRXN1-209ENST00000405581 PTPN23Q9H3S7 1636 aa20.28■□□□□ 0.84
NRXN1-209ENST00000405581 ABCC5O15440 1437 aa20.27■□□□□ 0.84
NRXN1-209ENST00000405581 USP5P45974 858 aa20.27■□□□□ 0.84
NRXN1-209ENST00000405581 MAP3K12Q12852 859 aa20.27■□□□□ 0.84
NRXN1-209ENST00000405581 SLF2Q8IX21 1173 aa20.27■□□□□ 0.84
NRXN1-209ENST00000405581 EIF5P55010 431 aaKnown RBP20.27■□□□□ 0.84
NRXN1-209ENST00000405581 AKNAQ7Z591 1439 aa20.26■□□□□ 0.83
NRXN1-209ENST00000405581 GOLGA6L7A0A1B0GV03 622 aa20.26■□□□□ 0.83
NRXN1-209ENST00000405581 POLR3DP05423 398 aaPredicted RBP20.26■□□□□ 0.83
NRXN1-209ENST00000405581 TAF4BQ92750 862 aa20.26■□□□□ 0.83
NRXN1-209ENST00000405581 SH2B1Q9NRF2 756 aaPredicted RBP20.26■□□□□ 0.83
NRXN1-209ENST00000405581 EZRP15311 586 aaKnown RBP20.26■□□□□ 0.83
NRXN1-209ENST00000405581 CRACR2BQ8N4Y2 399 aaPredicted RBP20.26■□□□□ 0.83
NRXN1-209ENST00000405581 RAB34Q9BZG1 259 aa20.26■□□□□ 0.83
NRXN1-209ENST00000405581 EXOC6BQ9Y2D4 811 aa20.26■□□□□ 0.83
NRXN1-209ENST00000405581 CTCFLQ8NI51 663 aaPredicted RBP20.26■□□□□ 0.83
NRXN1-209ENST00000405581 NAPBQ9H115 298 aa20.26■□□□□ 0.83
NRXN1-209ENST00000405581 MKNK2Q9HBH9 465 aa20.26■□□□□ 0.83
NRXN1-209ENST00000405581 CASTP20810 708 aaKnown RBP20.25■□□□□ 0.83
NRXN1-209ENST00000405581 XPCQ01831 940 aaPredicted RBP20.25■□□□□ 0.83
NRXN1-209ENST00000405581 IFIT5Q13325 482 aaKnown RBP20.25■□□□□ 0.83
NRXN1-209ENST00000405581 RNF41Q9H4P4 317 aaPredicted RBP20.25■□□□□ 0.83
NRXN1-209ENST00000405581 URB2Q14146 1524 aaKnown RBP20.25■□□□□ 0.83
NRXN1-209ENST00000405581 PIP4K2BP78356 416 aa20.25■□□□□ 0.83
NRXN1-209ENST00000405581 MAP3K11Q16584 847 aa20.25■□□□□ 0.83
NRXN1-209ENST00000405581 ZNF397Q8NF99 534 aaPredicted RBP20.25■□□□□ 0.83
NRXN1-209ENST00000405581 EPB41L2O43491 1005 aaKnown RBP20.25■□□□□ 0.83
NRXN1-209ENST00000405581 SKIDA1Q1XH10 827 aa20.25■□□□□ 0.83
NRXN1-209ENST00000405581 JAKMIP3Q5VZ66 844 aa20.25■□□□□ 0.83
NRXN1-209ENST00000405581 PHF8Q9UPP1 1060 aa20.25■□□□□ 0.83
NRXN1-209ENST00000405581 ADGRL1O94910 1474 aa20.25■□□□□ 0.83
NRXN1-209ENST00000405581 SCAND2PQ9GZW5 306 aaPredicted RBP20.24■□□□□ 0.83
NRXN1-209ENST00000405581 PTCD1O75127 700 aaKnown RBP20.24■□□□□ 0.83
NRXN1-209ENST00000405581 NUTM1Q86Y26 1132 aa20.24■□□□□ 0.83
NRXN1-209ENST00000405581 SEPT11Q9NVA2 429 aaKnown RBP20.24■□□□□ 0.83
NRXN1-209ENST00000405581 HYPKQ9NX55 129 aa20.24■□□□□ 0.83
NRXN1-209ENST00000405581 IQCA1Q86XH1 822 aa20.24■□□□□ 0.83
NRXN1-209ENST00000405581 SLC5A1P13866 664 aa20.23■□□□□ 0.83
NRXN1-209ENST00000405581 TEX13AQ9BXU3 409 aaPredicted RBP20.23■□□□□ 0.83
NRXN1-209ENST00000405581 GRPEL1Q9HAV7 217 aa20.23■□□□□ 0.83
NRXN1-209ENST00000405581 CCDC85AQ96PX6 553 aaPredicted RBP20.23■□□□□ 0.83
NRXN1-209ENST00000405581 KIF2AO00139 706 aaPredicted RBP20.23■□□□□ 0.83
NRXN1-209ENST00000405581 MATR3P43243 847 aaKnown RBP eCLIP20.23■□□□□ 0.83
NRXN1-209ENST00000405581 KIF20AO95235 890 aa20.23■□□□□ 0.83
NRXN1-209ENST00000405581 DBF4Q9UBU7 674 aaPredicted RBP20.23■□□□□ 0.83
NRXN1-209ENST00000405581 DNAJC5BQ9UF47 199 aa20.23■□□□□ 0.83
NRXN1-209ENST00000405581 DZIP1Q86YF9 867 aaKnown RBP20.22■□□□□ 0.83
NRXN1-209ENST00000405581 WDR97A6NE52 1622 aa20.22■□□□□ 0.83
NRXN1-209ENST00000405581 MCM4P33991 863 aa20.22■□□□□ 0.83
NRXN1-209ENST00000405581 PPP4R3AQ6IN85 833 aa20.22■□□□□ 0.83
NRXN1-209ENST00000405581 ARHGAP29Q52LW3 1261 aa20.22■□□□□ 0.83
NRXN1-209ENST00000405581 BCL11BQ9C0K0 894 aaPredicted RBP20.22■□□□□ 0.83
NRXN1-209ENST00000405581 LRPPRCP42704 1394 aaKnown RBP20.22■□□□□ 0.83
NRXN1-209ENST00000405581 PLEKHH1Q9ULM0 1364 aa20.22■□□□□ 0.83
NRXN1-209ENST00000405581 NEBLO76041 1014 aa20.22■□□□□ 0.83
NRXN1-209ENST00000405581 MYD88Q99836 296 aa20.22■□□□□ 0.83
NRXN1-209ENST00000405581 MCM10Q7L590 875 aa20.21■□□□□ 0.83
NRXN1-209ENST00000405581 DNAAF4Q8WXU2 420 aa20.21■□□□□ 0.83
NRXN1-209ENST00000405581 KIAA0754O94854 1291 aa20.21■□□□□ 0.83
NRXN1-209ENST00000405581 FGFR1OPO95684 399 aaKnown RBP20.21■□□□□ 0.83
NRXN1-209ENST00000405581 CALRP27797 417 aaKnown RBP20.2■□□□□ 0.82
NRXN1-209ENST00000405581 KIAA1328Q86T90 577 aa20.2■□□□□ 0.82
NRXN1-209ENST00000405581 ANKRD62A6NC57 917 aa20.2■□□□□ 0.82
NRXN1-209ENST00000405581 TSG101Q99816 390 aa20.2■□□□□ 0.82
NRXN1-209ENST00000405581 ANKRD18BA2A2Z9 1011 aa20.2■□□□□ 0.82
NRXN1-209ENST00000405581 ZNF444Q8N0Y2 327 aaPredicted RBP20.2■□□□□ 0.82
NRXN1-209ENST00000405581 MINDY4BA8MYZ0 360 aa20.2■□□□□ 0.82
NRXN1-209ENST00000405581 DDX11Q96FC9 970 aa20.2■□□□□ 0.82
NRXN1-209ENST00000405581 CFAP100Q494V2 611 aa20.19■□□□□ 0.82
NRXN1-209ENST00000405581 EHMT1Q9H9B1 1298 aa20.19■□□□□ 0.82
NRXN1-209ENST00000405581 TTC21BQ7Z4L5 1316 aa20.19■□□□□ 0.82
NRXN1-209ENST00000405581 FILIP1Q7Z7B0 1213 aa20.19■□□□□ 0.82
NRXN1-209ENST00000405581 FKBP15Q5T1M5 1219 aa20.19■□□□□ 0.82
NRXN1-209ENST00000405581 VPS36Q86VN1 386 aa20.19■□□□□ 0.82
NRXN1-209ENST00000405581 ANO10Q9NW15 660 aa20.19■□□□□ 0.82
NRXN1-209ENST00000405581 TRMT112Q9UI30 125 aaKnown RBP20.19■□□□□ 0.82
NRXN1-209ENST00000405581 BIVM-ERCC5R4GMW8 1640 aa20.19■□□□□ 0.82
NRXN1-209ENST00000405581 TMEM266Q2M3C6 531 aa20.19■□□□□ 0.82
NRXN1-209ENST00000405581 LDHCP07864 332 aa20.18■□□□□ 0.82
NRXN1-209ENST00000405581 ENOX2Q16206 610 aaKnown RBP20.18■□□□□ 0.82
NRXN1-209ENST00000405581 PRPF40BQ6NWY9 871 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms