RNA–Protein interactions for RNA: ENST00000405489.7

ATRAID-202, Transcript of all-trans retinoic acid induced differentiation factor, humanhuman

TSL 1 (best) BASIC

Gene ATRAID, Length 1,059 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRAID-202ENST00000405489 MTHFSDQ2M296 383 aaKnown RBP17.77■□□□□ 0.44
ATRAID-202ENST00000405489 NUDCQ9Y266 331 aa17.77■□□□□ 0.44
ATRAID-202ENST00000405489 ATF5Q9Y2D1 282 aaPredicted RBP17.77■□□□□ 0.44
ATRAID-202ENST00000405489 COL5A3P25940 1745 aaPredicted RBP17.76■□□□□ 0.43
ATRAID-202ENST00000405489 NFATC2IPQ8NCF5 419 aa17.76■□□□□ 0.43
ATRAID-202ENST00000405489 PPP1R1BQ9UD71 204 aaPredicted RBP17.76■□□□□ 0.43
ATRAID-202ENST00000405489 SGIP1Q9BQI5 828 aa17.75■□□□□ 0.43
ATRAID-202ENST00000405489 DDX10Q13206 875 aaKnown RBP17.74■□□□□ 0.43
ATRAID-202ENST00000405489 FLAD1Q8NFF5 587 aa17.74■□□□□ 0.43
ATRAID-202ENST00000405489 ATP6V1AP38606 617 aa17.73■□□□□ 0.43
ATRAID-202ENST00000405489 COL23A1Q86Y22 540 aaPredicted RBP17.73■□□□□ 0.43
ATRAID-202ENST00000405489 LGR6Q9HBX8 967 aa17.73■□□□□ 0.43
ATRAID-202ENST00000405489 MRC1P22897 1456 aa17.73■□□□□ 0.43
ATRAID-202ENST00000405489 CICQ96RK0 1608 aaPredicted RBP17.72■□□□□ 0.43
ATRAID-202ENST00000405489 SIPA1L3O60292 1781 aaPredicted RBP17.72■□□□□ 0.43
ATRAID-202ENST00000405489 RNMTO43148 476 aaKnown RBP17.72■□□□□ 0.43
ATRAID-202ENST00000405489 ITPK1Q13572 414 aa17.72■□□□□ 0.43
ATRAID-202ENST00000405489 RSPH6AQ9H0K4 717 aa17.72■□□□□ 0.43
ATRAID-202ENST00000405489 SLC52A2Q9HAB3 445 aa17.72■□□□□ 0.43
ATRAID-202ENST00000405489 MYH14Q7Z406 1995 aaKnown RBP17.71■□□□□ 0.43
ATRAID-202ENST00000405489 FCHSD2O94868 740 aa17.71■□□□□ 0.43
ATRAID-202ENST00000405489 U2AF1L5P0DN76 240 aaPredicted RBP17.71■□□□□ 0.43
ATRAID-202ENST00000405489 U2AF1Q01081 240 aaKnown RBP eCLIP17.71■□□□□ 0.43
ATRAID-202ENST00000405489 RALBP1Q15311 655 aa17.71■□□□□ 0.43
ATRAID-202ENST00000405489 LINC00116Q8NCU8 138 aa17.71■□□□□ 0.43
ATRAID-202ENST00000405489 GAS2L2Q8NHY3 880 aa17.71■□□□□ 0.43
ATRAID-202ENST00000405489 AK7Q96M32 723 aa17.71■□□□□ 0.43
ATRAID-202ENST00000405489 PRKAR2BP31323 418 aa17.7■□□□□ 0.42
ATRAID-202ENST00000405489 SLC4A9Q96Q91 983 aa17.7■□□□□ 0.42
ATRAID-202ENST00000405489 RBM42Q9BTD8 480 aaKnown RBP17.7■□□□□ 0.42
ATRAID-202ENST00000405489 UBR2Q8IWV8 1755 aa17.69■□□□□ 0.42
ATRAID-202ENST00000405489 GNAT3A8MTJ3 354 aa17.69■□□□□ 0.42
ATRAID-202ENST00000405489 PHACTR3Q96KR7 559 aa17.69■□□□□ 0.42
ATRAID-202ENST00000405489 ARXQ96QS3 562 aa17.69■□□□□ 0.42
ATRAID-202ENST00000405489 TJP1Q07157 1748 aa17.69■□□□□ 0.42
ATRAID-202ENST00000405489 DLG5Q8TDM6 1919 aa17.68■□□□□ 0.42
ATRAID-202ENST00000405489 MAP3K5Q99683 1374 aa17.68■□□□□ 0.42
ATRAID-202ENST00000405489 MSH5O43196 834 aa17.67■□□□□ 0.42
ATRAID-202ENST00000405489 SSFA2P28290 1259 aa17.67■□□□□ 0.42
ATRAID-202ENST00000405489 RC3H1Q5TC82 1133 aaKnown RBP17.67■□□□□ 0.42
ATRAID-202ENST00000405489 IL17REQ8NFR9 667 aa17.67■□□□□ 0.42
ATRAID-202ENST00000405489 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.66■□□□□ 0.42
ATRAID-202ENST00000405489 PTCD1O75127 700 aaKnown RBP17.66■□□□□ 0.42
ATRAID-202ENST00000405489 POLD1P28340 1107 aa17.66■□□□□ 0.42
ATRAID-202ENST00000405489 AMIGO3Q86WK7 504 aa17.66■□□□□ 0.42
ATRAID-202ENST00000405489 GNPATO15228 680 aa17.65■□□□□ 0.42
ATRAID-202ENST00000405489 CNTNAP4Q9C0A0 1308 aa17.65■□□□□ 0.42
ATRAID-202ENST00000405489 SYT17Q9BSW7 474 aa17.64■□□□□ 0.41
ATRAID-202ENST00000405489 FHDC1Q9C0D6 1143 aaPredicted RBP17.64■□□□□ 0.41
ATRAID-202ENST00000405489 CEMIPQ8WUJ3 1361 aa17.64■□□□□ 0.41
ATRAID-202ENST00000405489 KCPQ6ZWJ8 1503 aa17.63■□□□□ 0.41
ATRAID-202ENST00000405489 PHF14O94880 888 aa17.63■□□□□ 0.41
ATRAID-202ENST00000405489 C4AP0C0L4 1744 aa17.62■□□□□ 0.41
ATRAID-202ENST00000405489 TEFQ10587 303 aa17.62■□□□□ 0.41
ATRAID-202ENST00000405489 SLC39A6Q13433 755 aa17.62■□□□□ 0.41
ATRAID-202ENST00000405489 RTCBQ9Y3I0 505 aaKnown RBP17.62■□□□□ 0.41
ATRAID-202ENST00000405489 HTATSF1O43719 755 aaKnown RBP17.61■□□□□ 0.41
ATRAID-202ENST00000405489 RPS6KA4O75676 772 aa17.61■□□□□ 0.41
ATRAID-202ENST00000405489 ADRA2BP18089 450 aa17.61■□□□□ 0.41
ATRAID-202ENST00000405489 TRAPPC3LQ5T215 181 aa17.61■□□□□ 0.41
ATRAID-202ENST00000405489 SMIM5Q71RC9 77 aa17.61■□□□□ 0.41
ATRAID-202ENST00000405489 VSIG10Q8N0Z9 540 aa17.61■□□□□ 0.41
ATRAID-202ENST00000405489 PNNQ9H307 717 aaKnown RBP17.61■□□□□ 0.41
ATRAID-202ENST00000405489 MYBBP1AQ9BQG0 1328 aaKnown RBP17.61■□□□□ 0.41
ATRAID-202ENST00000405489 PLEKHF1Q96S99 279 aa17.6■□□□□ 0.41
ATRAID-202ENST00000405489 DCAF8L1A6NGE4 600 aa17.59■□□□□ 0.41
ATRAID-202ENST00000405489 NEFMP07197 916 aa17.59■□□□□ 0.41
ATRAID-202ENST00000405489 CRKLP46109 303 aaKnown RBP17.59■□□□□ 0.41
ATRAID-202ENST00000405489 MSL1Q68DK7 614 aa17.59■□□□□ 0.41
ATRAID-202ENST00000405489 RTF1Q92541 710 aaKnown RBP17.59■□□□□ 0.41
ATRAID-202ENST00000405489 INTS5Q6P9B9 1019 aaKnown RBP17.58■□□□□ 0.4
ATRAID-202ENST00000405489 ZNF790Q6PG37 636 aa17.58■□□□□ 0.4
ATRAID-202ENST00000405489 DNAJC10Q8IXB1 793 aa17.58■□□□□ 0.4
ATRAID-202ENST00000405489 TTC5Q8N0Z6 440 aa17.58■□□□□ 0.4
ATRAID-202ENST00000405489 ARHGEF1Q92888 912 aaKnown RBP17.58■□□□□ 0.4
ATRAID-202ENST00000405489 CYP19A1P11511 503 aaPredicted RBP17.57■□□□□ 0.4
ATRAID-202ENST00000405489 PRKRIP1Q9H875 184 aaPredicted RBP17.57■□□□□ 0.4
ATRAID-202ENST00000405489 RFC4P35249 363 aa17.56■□□□□ 0.4
ATRAID-202ENST00000405489 CHD4Q14839 1912 aa17.55■□□□□ 0.4
ATRAID-202ENST00000405489 MCM10Q7L590 875 aa17.55■□□□□ 0.4
ATRAID-202ENST00000405489 NLGN1Q8N2Q7 840 aa17.55■□□□□ 0.4
ATRAID-202ENST00000405489 ZNF496Q96IT1 587 aaPredicted RBP17.55■□□□□ 0.4
ATRAID-202ENST00000405489 CCDC87Q9NVE4 849 aa17.55■□□□□ 0.4
ATRAID-202ENST00000405489 KIF13BQ9NQT8 1826 aa17.54■□□□□ 0.4
ATRAID-202ENST00000405489 BTBD11A6QL63 1104 aa17.54■□□□□ 0.4
ATRAID-202ENST00000405489 TEX13AQ9BXU3 409 aaPredicted RBP17.54■□□□□ 0.4
ATRAID-202ENST00000405489 CD2APQ9Y5K6 639 aa17.54■□□□□ 0.4
ATRAID-202ENST00000405489 HEG1Q9ULI3 1381 aa17.53■□□□□ 0.4
ATRAID-202ENST00000405489 MAPK8IP3Q9UPT6 1336 aa17.53■□□□□ 0.4
ATRAID-202ENST00000405489 STARD3NLO95772 234 aa17.53■□□□□ 0.4
ATRAID-202ENST00000405489 NFE2L2Q16236 605 aa17.53■□□□□ 0.4
ATRAID-202ENST00000405489 FMNL2Q96PY5 1086 aa17.53■□□□□ 0.4
ATRAID-202ENST00000405489 ZNF316A6NFI3 1004 aaPredicted RBP17.52■□□□□ 0.4
ATRAID-202ENST00000405489 GYS1P13807 737 aa17.52■□□□□ 0.4
ATRAID-202ENST00000405489 DCTN1Q14203 1278 aa17.52■□□□□ 0.4
ATRAID-202ENST00000405489 TAF7Q15545 349 aaPredicted RBP17.52■□□□□ 0.4
ATRAID-202ENST00000405489 KLHL34Q8N239 644 aa17.52■□□□□ 0.4
ATRAID-202ENST00000405489 KDM3BQ7LBC6 1761 aa17.52■□□□□ 0.4
ATRAID-202ENST00000405489 SOS1Q07889 1333 aaPredicted RBP17.51■□□□□ 0.39
ATRAID-202ENST00000405489 USP42Q9H9J4 1324 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms