RNA–Protein interactions for RNA: ENST00000404744.1

CDPF1-204, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3 BASIC

Gene CDPF1, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-204ENST00000404744 BCL9O00512 1426 aa20.49■□□□□ 0.87
CDPF1-204ENST00000404744 ADAMTS7Q9UKP4 1686 aa20.49■□□□□ 0.87
CDPF1-204ENST00000404744 E9PSI1 815 aa20.48■□□□□ 0.87
CDPF1-204ENST00000404744 MYH16Q9H6N6 1097 aa20.48■□□□□ 0.87
CDPF1-204ENST00000404744 BABAM1Q9NWV8 329 aa20.48■□□□□ 0.87
CDPF1-204ENST00000404744 TSPYL4Q9UJ04 414 aa20.48■□□□□ 0.87
CDPF1-204ENST00000404744 VIRMAQ69YN4 1812 aaKnown RBP20.47■□□□□ 0.87
CDPF1-204ENST00000404744 PIGBQ92521 554 aa20.47■□□□□ 0.87
CDPF1-204ENST00000404744 MIS18AQ9NYP9 233 aa20.47■□□□□ 0.87
CDPF1-204ENST00000404744 DOT1LQ8TEK3 1739 aa20.46■□□□□ 0.87
CDPF1-204ENST00000404744 KCNQ2O43526 872 aa20.46■□□□□ 0.87
CDPF1-204ENST00000404744 TTC5Q8N0Z6 440 aa20.46■□□□□ 0.87
CDPF1-204ENST00000404744 KAT6BQ8WYB5 2073 aa20.46■□□□□ 0.87
CDPF1-204ENST00000404744 MRC1P22897 1456 aa20.45■□□□□ 0.86
CDPF1-204ENST00000404744 CHL1O00533 1208 aa20.45■□□□□ 0.86
CDPF1-204ENST00000404744 UPF1Q92900 1129 aaKnown RBP eCLIP20.45■□□□□ 0.86
CDPF1-204ENST00000404744 CDCA7LQ96GN5 454 aa20.45■□□□□ 0.86
CDPF1-204ENST00000404744 TOGARAM1Q9Y4F4 1720 aa20.45■□□□□ 0.86
CDPF1-204ENST00000404744 ZNF853P0CG23 659 aa20.44■□□□□ 0.86
CDPF1-204ENST00000404744 SLFN5Q08AF3 891 aa20.44■□□□□ 0.86
CDPF1-204ENST00000404744 TRIM37O94972 964 aa20.43■□□□□ 0.86
CDPF1-204ENST00000404744 BCL11BQ9C0K0 894 aaPredicted RBP20.43■□□□□ 0.86
CDPF1-204ENST00000404744 MBIPQ9NS73 344 aa20.43■□□□□ 0.86
CDPF1-204ENST00000404744 SLC39A6Q13433 755 aa20.43■□□□□ 0.86
CDPF1-204ENST00000404744 SPINK5Q9NQ38 1064 aaPredicted RBP20.43■□□□□ 0.86
CDPF1-204ENST00000404744 ZNF790Q6PG37 636 aa20.42■□□□□ 0.86
CDPF1-204ENST00000404744 TSR2Q969E8 191 aaKnown RBP20.42■□□□□ 0.86
CDPF1-204ENST00000404744 ITGB4P16144 1822 aa20.41■□□□□ 0.86
CDPF1-204ENST00000404744 SMARCC1Q92922 1105 aaPredicted RBP20.41■□□□□ 0.86
CDPF1-204ENST00000404744 FANCIQ9NVI1 1328 aa20.4■□□□□ 0.86
CDPF1-204ENST00000404744 ASAP1Q9ULH1 1129 aa20.4■□□□□ 0.86
CDPF1-204ENST00000404744 NHSQ6T4R5 1651 aa20.4■□□□□ 0.86
CDPF1-204ENST00000404744 SIPA1L3O60292 1781 aaPredicted RBP20.39■□□□□ 0.86
CDPF1-204ENST00000404744 ATG3Q9NT62 314 aa20.39■□□□□ 0.85
CDPF1-204ENST00000404744 KCNQ3O43525 872 aa20.38■□□□□ 0.85
CDPF1-204ENST00000404744 FMNL2Q96PY5 1086 aa20.38■□□□□ 0.85
CDPF1-204ENST00000404744 SBF2Q86WG5 1849 aa20.38■□□□□ 0.85
CDPF1-204ENST00000404744 SF3B2Q13435 895 aaKnown RBP20.37■□□□□ 0.85
CDPF1-204ENST00000404744 PTF1AQ7RTS3 328 aa20.37■□□□□ 0.85
CDPF1-204ENST00000404744 TRMT2AQ8IZ69 625 aaKnown RBP20.37■□□□□ 0.85
CDPF1-204ENST00000404744 RBM42Q9BTD8 480 aaKnown RBP20.37■□□□□ 0.85
CDPF1-204ENST00000404744 PTCD1O75127 700 aaKnown RBP20.37■□□□□ 0.85
CDPF1-204ENST00000404744 EIF4A1P60842 406 aaKnown RBP20.37■□□□□ 0.85
CDPF1-204ENST00000404744 DUSP27Q5VZP5 1158 aa20.37■□□□□ 0.85
CDPF1-204ENST00000404744 EXOSC9Q06265 439 aaKnown RBP20.36■□□□□ 0.85
CDPF1-204ENST00000404744 PALLDQ8WX93 1383 aa20.35■□□□□ 0.85
CDPF1-204ENST00000404744 APBA3O96018 575 aa20.35■□□□□ 0.85
CDPF1-204ENST00000404744 ZNF496Q96IT1 587 aaPredicted RBP20.34■□□□□ 0.85
CDPF1-204ENST00000404744 KDM3BQ7LBC6 1761 aa20.34■□□□□ 0.85
CDPF1-204ENST00000404744 ELL2O00472 640 aaPredicted RBP20.33■□□□□ 0.85
CDPF1-204ENST00000404744 BTAF1O14981 1849 aa20.33■□□□□ 0.84
CDPF1-204ENST00000404744 SNRPA1P09661 255 aaKnown RBP20.32■□□□□ 0.84
CDPF1-204ENST00000404744 TWISTNBQ3B726 338 aaPredicted RBP20.32■□□□□ 0.84
CDPF1-204ENST00000404744 C8orf58Q8NAV2 365 aa20.32■□□□□ 0.84
CDPF1-204ENST00000404744 HEG1Q9ULI3 1381 aa20.31■□□□□ 0.84
CDPF1-204ENST00000404744 PAPPAQ13219 1627 aa20.31■□□□□ 0.84
CDPF1-204ENST00000404744 LOC102724428A0A0B4J2F2 783 aa20.31■□□□□ 0.84
CDPF1-204ENST00000404744 SIK1P57059 783 aa20.31■□□□□ 0.84
CDPF1-204ENST00000404744 KRT24Q2M2I5 525 aa20.31■□□□□ 0.84
CDPF1-204ENST00000404744 CCDC125Q86Z20 511 aa20.31■□□□□ 0.84
CDPF1-204ENST00000404744 VSIG10Q8N0Z9 540 aa20.31■□□□□ 0.84
CDPF1-204ENST00000404744 CHMP4AQ9BY43 222 aa20.31■□□□□ 0.84
CDPF1-204ENST00000404744 GIGYF1O75420 1035 aaPredicted RBP20.3■□□□□ 0.84
CDPF1-204ENST00000404744 ATP6V1AP38606 617 aa20.3■□□□□ 0.84
CDPF1-204ENST00000404744 TEX13AQ9BXU3 409 aaPredicted RBP20.3■□□□□ 0.84
CDPF1-204ENST00000404744 SOS1Q07889 1333 aaPredicted RBP20.3■□□□□ 0.84
CDPF1-204ENST00000404744 KCPQ6ZWJ8 1503 aa20.29■□□□□ 0.84
CDPF1-204ENST00000404744 PLSCR1O15162 318 aa20.29■□□□□ 0.84
CDPF1-204ENST00000404744 HOXB7P09629 217 aa20.28■□□□□ 0.84
CDPF1-204ENST00000404744 CT47B1P0C2W7 299 aaPredicted RBP20.28■□□□□ 0.84
CDPF1-204ENST00000404744 TSPYL6Q8N831 410 aa20.28■□□□□ 0.84
CDPF1-204ENST00000404744 CCNL1Q9UK58 526 aaPredicted RBP20.28■□□□□ 0.84
CDPF1-204ENST00000404744 EIF2S2P20042 333 aaKnown RBP20.27■□□□□ 0.84
CDPF1-204ENST00000404744 HMGB2P26583 209 aaKnown RBP20.27■□□□□ 0.84
CDPF1-204ENST00000404744 BAG6P46379 1132 aa20.27■□□□□ 0.84
CDPF1-204ENST00000404744 UBR2Q8IWV8 1755 aa20.27■□□□□ 0.84
CDPF1-204ENST00000404744 EP400Q96L91 3159 aa20.26■□□□□ 0.83
CDPF1-204ENST00000404744 VAMP4O75379 141 aa20.26■□□□□ 0.83
CDPF1-204ENST00000404744 STARD3NLO95772 234 aa20.26■□□□□ 0.83
CDPF1-204ENST00000404744 CENPBP07199 599 aaPredicted RBP20.26■□□□□ 0.83
CDPF1-204ENST00000404744 SLC27A3Q5K4L6 730 aa20.26■□□□□ 0.83
CDPF1-204ENST00000404744 PRAMEF22A3QJZ6 481 aa20.25■□□□□ 0.83
CDPF1-204ENST00000404744 HDGFL1Q5TGJ6 251 aa20.25■□□□□ 0.83
CDPF1-204ENST00000404744 DNAJC10Q8IXB1 793 aa20.25■□□□□ 0.83
CDPF1-204ENST00000404744 USP16Q9Y5T5 823 aa20.25■□□□□ 0.83
CDPF1-204ENST00000404744 TXNRD1Q16881 649 aa20.24■□□□□ 0.83
CDPF1-204ENST00000404744 CCDC30Q5VVM6 783 aa20.24■□□□□ 0.83
CDPF1-204ENST00000404744 NECTIN2Q92692 538 aa20.24■□□□□ 0.83
CDPF1-204ENST00000404744 ZNF428Q96B54 188 aa20.24■□□□□ 0.83
CDPF1-204ENST00000404744 SLC4A9Q96Q91 983 aa20.24■□□□□ 0.83
CDPF1-204ENST00000404744 TNS1Q9HBL0 1735 aaKnown RBP20.23■□□□□ 0.83
CDPF1-204ENST00000404744 EN1Q05925 392 aaPredicted RBP20.22■□□□□ 0.83
CDPF1-204ENST00000404744 STK31Q9BXU1 1019 aa20.22■□□□□ 0.83
CDPF1-204ENST00000404744 KCNQ4P56696 695 aa20.22■□□□□ 0.83
CDPF1-204ENST00000404744 ITPK1Q13572 414 aa20.22■□□□□ 0.83
CDPF1-204ENST00000404744 LY75O60449 1722 aa20.21■□□□□ 0.83
CDPF1-204ENST00000404744 CYP19A1P11511 503 aaPredicted RBP20.2■□□□□ 0.82
CDPF1-204ENST00000404744 ALDH1L2Q3SY69 923 aa20.2■□□□□ 0.82
CDPF1-204ENST00000404744 TCERG1O14776 1098 aaKnown RBP20.19■□□□□ 0.82
CDPF1-204ENST00000404744 EZH2Q15910 746 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms