RNA–Protein interactions for RNA: ENST00000403810.5

TSC1-202, Transcript of TSC complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene TSC1, Length 1,507 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-202ENST00000403810 SHANK3Q9BYB0 1731 aa19.7■□□□□ 0.74
TSC1-202ENST00000403810 DZIP1LQ8IYY4 767 aaKnown RBP19.7■□□□□ 0.74
TSC1-202ENST00000403810 SSH1Q8WYL5 1049 aa19.7■□□□□ 0.74
TSC1-202ENST00000403810 MVPQ14764 893 aaKnown RBP19.69■□□□□ 0.74
TSC1-202ENST00000403810 BCL2L13Q9BXK5 485 aa19.69■□□□□ 0.74
TSC1-202ENST00000403810 PKD1L3Q7Z443 1732 aa19.68■□□□□ 0.74
TSC1-202ENST00000403810 EXOC5O00471 708 aa19.68■□□□□ 0.74
TSC1-202ENST00000403810 FTSJ3Q8IY81 847 aaKnown RBP19.68■□□□□ 0.74
TSC1-202ENST00000403810 MARCH10Q8NA82 808 aaPredicted RBP19.68■□□□□ 0.74
TSC1-202ENST00000403810 CFAP44Q96MT7 982 aa19.68■□□□□ 0.74
TSC1-202ENST00000403810 RLBP1P12271 317 aa19.67■□□□□ 0.74
TSC1-202ENST00000403810 ATF7IPQ6VMQ6 1270 aa19.67■□□□□ 0.74
TSC1-202ENST00000403810 PDE4AP27815 886 aa19.66■□□□□ 0.74
TSC1-202ENST00000403810 ZCRB1Q8TBF4 217 aaKnown RBP19.66■□□□□ 0.74
TSC1-202ENST00000403810 BACH2Q9BYV9 841 aa19.66■□□□□ 0.74
TSC1-202ENST00000403810 DDX54Q8TDD1 881 aaKnown RBP19.65■□□□□ 0.74
TSC1-202ENST00000403810 DDX19BQ9UMR2 479 aa19.64■□□□□ 0.73
TSC1-202ENST00000403810 LAS1LQ9Y4W2 734 aaKnown RBP19.64■□□□□ 0.73
TSC1-202ENST00000403810 PCDH11XQ9BZA7 1347 aa19.64■□□□□ 0.73
TSC1-202ENST00000403810 PCDH11YQ9BZA8 1340 aa19.64■□□□□ 0.73
TSC1-202ENST00000403810 DLG5Q8TDM6 1919 aa19.64■□□□□ 0.73
TSC1-202ENST00000403810 TRIM27P14373 513 aa19.63■□□□□ 0.73
TSC1-202ENST00000403810 ANP32AP39687 249 aaKnown RBP19.63■□□□□ 0.73
TSC1-202ENST00000403810 ARHGAP45Q92619 1136 aa19.63■□□□□ 0.73
TSC1-202ENST00000403810 MBIPQ9NS73 344 aa19.63■□□□□ 0.73
TSC1-202ENST00000403810 PLEKHG2Q9H7P9 1386 aa19.63■□□□□ 0.73
TSC1-202ENST00000403810 CYP27B1O15528 508 aa19.62■□□□□ 0.73
TSC1-202ENST00000403810 VAMP4O75379 141 aa19.62■□□□□ 0.73
TSC1-202ENST00000403810 RWDD1Q9H446 243 aaPredicted RBP19.62■□□□□ 0.73
TSC1-202ENST00000403810 NOB1Q9ULX3 412 aaKnown RBP19.62■□□□□ 0.73
TSC1-202ENST00000403810 IGHDP01880 384 aa19.61■□□□□ 0.73
TSC1-202ENST00000403810 THUMPD2Q9BTF0 503 aaKnown RBP19.61■□□□□ 0.73
TSC1-202ENST00000403810 CHMP4BQ9H444 224 aaKnown RBP19.61■□□□□ 0.73
TSC1-202ENST00000403810 SPG7Q9UQ90 795 aa19.61■□□□□ 0.73
TSC1-202ENST00000403810 FAM196AQ6ZSG2 479 aa19.6■□□□□ 0.73
TSC1-202ENST00000403810 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.6■□□□□ 0.734e-7■■■□□ 16.6
TSC1-202ENST00000403810 TNNQ9UQP3 1299 aa19.6■□□□□ 0.73
TSC1-202ENST00000403810 BCL9O00512 1426 aa19.59■□□□□ 0.73
TSC1-202ENST00000403810 PLEKHO1Q53GL0 409 aaPredicted RBP19.59■□□□□ 0.73
TSC1-202ENST00000403810 ZNF530Q6P9A1 599 aaPredicted RBP19.59■□□□□ 0.73
TSC1-202ENST00000403810 GAS2L2Q8NHY3 880 aa19.59■□□□□ 0.73
TSC1-202ENST00000403810 HTATSF1O43719 755 aaKnown RBP19.58■□□□□ 0.73
TSC1-202ENST00000403810 CHL1O00533 1208 aa19.57■□□□□ 0.72
TSC1-202ENST00000403810 PHKG2P15735 406 aa19.57■□□□□ 0.72
TSC1-202ENST00000403810 TWISTNBQ3B726 338 aaPredicted RBP19.57■□□□□ 0.72
TSC1-202ENST00000403810 AMOTQ4VCS5 1084 aa19.57■□□□□ 0.72
TSC1-202ENST00000403810 MRPL50Q8N5N7 158 aaKnown RBP19.57■□□□□ 0.72
TSC1-202ENST00000403810 PCDHB15Q9Y5E8 787 aa19.57■□□□□ 0.72
TSC1-202ENST00000403810 DOT1LQ8TEK3 1739 aa19.57■□□□□ 0.72
TSC1-202ENST00000403810 TOGARAM1Q9Y4F4 1720 aa19.56■□□□□ 0.72
TSC1-202ENST00000403810 MTHFSDQ2M296 383 aaKnown RBP19.56■□□□□ 0.72
TSC1-202ENST00000403810 FAM161AQ3B820 660 aa19.56■□□□□ 0.72
TSC1-202ENST00000403810 ACSBG1Q96GR2 724 aa19.56■□□□□ 0.72
TSC1-202ENST00000403810 TRIM37O94972 964 aa19.56■□□□□ 0.72
TSC1-202ENST00000403810 PTF1AQ7RTS3 328 aa19.56■□□□□ 0.72
TSC1-202ENST00000403810 ITPRIPQ8IWB1 547 aa19.56■□□□□ 0.72
TSC1-202ENST00000403810 IFNL2Q8IZJ0 200 aa19.56■□□□□ 0.72
TSC1-202ENST00000403810 UPF1Q92900 1129 aaKnown RBP eCLIP19.56■□□□□ 0.72
TSC1-202ENST00000403810 MSH5O43196 834 aa19.55■□□□□ 0.72
TSC1-202ENST00000403810 HDAC1Q13547 482 aaPredicted RBP19.55■□□□□ 0.72
TSC1-202ENST00000403810 KDM6AO15550 1401 aaPredicted RBP19.55■□□□□ 0.72
TSC1-202ENST00000403810 TNS1Q9HBL0 1735 aaKnown RBP19.55■□□□□ 0.72
TSC1-202ENST00000403810 NHSQ6T4R5 1651 aa19.54■□□□□ 0.72
TSC1-202ENST00000403810 KCNQ2O43526 872 aa19.54■□□□□ 0.72
TSC1-202ENST00000403810 TSPYL6Q8N831 410 aa19.54■□□□□ 0.72
TSC1-202ENST00000403810 RTF1Q92541 710 aaKnown RBP19.54■□□□□ 0.72
TSC1-202ENST00000403810 DCTN1Q14203 1278 aa19.53■□□□□ 0.72
TSC1-202ENST00000403810 TMEM57Q8N5G2 664 aa19.53■□□□□ 0.72
TSC1-202ENST00000403810 IPO9Q96P70 1041 aaKnown RBP19.53■□□□□ 0.72
TSC1-202ENST00000403810 API5Q9BZZ5 524 aaKnown RBP19.53■□□□□ 0.72
TSC1-202ENST00000403810 SBF2Q86WG5 1849 aa19.53■□□□□ 0.72
TSC1-202ENST00000403810 SOCS7O14512 581 aa19.52■□□□□ 0.72
TSC1-202ENST00000403810 C1orf141Q5JVX7 400 aa19.52■□□□□ 0.72
TSC1-202ENST00000403810 C8orf58Q8NAV2 365 aa19.52■□□□□ 0.72
TSC1-202ENST00000403810 ZBTB40Q9NUA8 1239 aa19.52■□□□□ 0.72
TSC1-202ENST00000403810 NKX1-1Q15270 411 aaPredicted RBP19.51■□□□□ 0.71
TSC1-202ENST00000403810 SKAP1Q86WV1 359 aa19.51■□□□□ 0.71
TSC1-202ENST00000403810 RGS3P49796 1198 aa19.51■□□□□ 0.71
TSC1-202ENST00000403810 AKAP4Q5JQC9 854 aa19.51■□□□□ 0.71
TSC1-202ENST00000403810 MPRIPQ6WCQ1 1025 aa19.51■□□□□ 0.71
TSC1-202ENST00000403810 SYTL4Q96C24 671 aaPredicted RBP19.51■□□□□ 0.71
TSC1-202ENST00000403810 MAP3K5Q99683 1374 aa19.5■□□□□ 0.71
TSC1-202ENST00000403810 PRIM1P49642 420 aaKnown RBP19.5■□□□□ 0.71
TSC1-202ENST00000403810 MCM10Q7L590 875 aa19.5■□□□□ 0.71
TSC1-202ENST00000403810 ANP32EQ9BTT0 268 aa19.5■□□□□ 0.71
TSC1-202ENST00000403810 ABCC4O15439 1325 aa19.49■□□□□ 0.71
TSC1-202ENST00000403810 ERICH6Q7L0X2 663 aa19.49■□□□□ 0.71
TSC1-202ENST00000403810 BCL11BQ9C0K0 894 aaPredicted RBP19.49■□□□□ 0.71
TSC1-202ENST00000403810 BABAM1Q9NWV8 329 aa19.49■□□□□ 0.71
TSC1-202ENST00000403810 DCAF5Q96JK2 942 aa19.48■□□□□ 0.71
TSC1-202ENST00000403810 HSP90AB1P08238 724 aaKnown RBP19.47■□□□□ 0.71
TSC1-202ENST00000403810 C8orf34Q49A92 452 aa19.47■□□□□ 0.71
TSC1-202ENST00000403810 SOS1Q07889 1333 aaPredicted RBP19.47■□□□□ 0.71
TSC1-202ENST00000403810 GNAT3A8MTJ3 354 aa19.46■□□□□ 0.71
TSC1-202ENST00000403810 DEFB132Q7Z7B7 95 aa19.46■□□□□ 0.71
TSC1-202ENST00000403810 ADAMTS7Q9UKP4 1686 aa19.46■□□□□ 0.71
TSC1-202ENST00000403810 BTAF1O14981 1849 aa19.46■□□□□ 0.71
TSC1-202ENST00000403810 ELL2O00472 640 aaPredicted RBP19.46■□□□□ 0.71
TSC1-202ENST00000403810 SF3B2Q13435 895 aaKnown RBP19.46■□□□□ 0.71
TSC1-202ENST00000403810 LGR6Q9HBX8 967 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms