RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 PPP6R1Q9UPN7 881 aa16.56■□□□□ 0.24
HMGA2-204ENST00000403681 CCDC9Q9Y3X0 531 aaKnown RBP16.56■□□□□ 0.24
HMGA2-204ENST00000403681 PTPRCP08575 1304 aa16.56■□□□□ 0.24
HMGA2-204ENST00000403681 SMC2O95347 1197 aa16.56■□□□□ 0.24
HMGA2-204ENST00000403681 PHACTR3Q96KR7 559 aa16.56■□□□□ 0.24
HMGA2-204ENST00000403681 CLIP2Q9UDT6 1046 aa16.56■□□□□ 0.24
HMGA2-204ENST00000403681 SRGAP3O43295 1099 aa16.56■□□□□ 0.24
HMGA2-204ENST00000403681 CCDC186Q7Z3E2 898 aa16.56■□□□□ 0.24
HMGA2-204ENST00000403681 FSD1Q9BTV5 496 aa16.55■□□□□ 0.24
HMGA2-204ENST00000403681 PTPRTO14522 1441 aa16.55■□□□□ 0.24
HMGA2-204ENST00000403681 MAPK8IP2Q13387 824 aaPredicted RBP16.55■□□□□ 0.24
HMGA2-204ENST00000403681 PLA2R1Q13018 1463 aa16.55■□□□□ 0.24
HMGA2-204ENST00000403681 GJB2P29033 226 aa16.55■□□□□ 0.24
HMGA2-204ENST00000403681 LRRIQ1Q96JM4 1722 aa16.54■□□□□ 0.24
HMGA2-204ENST00000403681 KIF20AO95235 890 aa16.54■□□□□ 0.24
HMGA2-204ENST00000403681 PRPF40BQ6NWY9 871 aaKnown RBP16.54■□□□□ 0.24
HMGA2-204ENST00000403681 BLOC1S2Q6QNY1 142 aa16.54■□□□□ 0.24
HMGA2-204ENST00000403681 TEFQ10587 303 aa16.54■□□□□ 0.24
HMGA2-204ENST00000403681 SCAND2PQ9GZW5 306 aaPredicted RBP16.54■□□□□ 0.24
HMGA2-204ENST00000403681 GADD45BO75293 160 aaPredicted RBP16.54■□□□□ 0.24
HMGA2-204ENST00000403681 NME9Q86XW9 330 aa16.54■□□□□ 0.24
HMGA2-204ENST00000403681 ANKRD1Q15327 319 aa16.53■□□□□ 0.24
HMGA2-204ENST00000403681 SH2B1Q9NRF2 756 aaPredicted RBP16.53■□□□□ 0.24
HMGA2-204ENST00000403681 KIF18AQ8NI77 898 aa16.53■□□□□ 0.24
HMGA2-204ENST00000403681 CHMP4CQ96CF2 233 aa16.53■□□□□ 0.24
HMGA2-204ENST00000403681 TFIP11Q9UBB9 837 aaKnown RBP16.53■□□□□ 0.24
HMGA2-204ENST00000403681 FAM200AQ8TCP9 573 aa16.53■□□□□ 0.24
HMGA2-204ENST00000403681 SPG7Q9UQ90 795 aa16.53■□□□□ 0.24
HMGA2-204ENST00000403681 RIOK3O14730 519 aaKnown RBP16.53■□□□□ 0.24
HMGA2-204ENST00000403681 BRD1O95696 1058 aa16.53■□□□□ 0.24
HMGA2-204ENST00000403681 PDIA4P13667 645 aaKnown RBP16.53■□□□□ 0.24
HMGA2-204ENST00000403681 ZNF165P49910 485 aa16.53■□□□□ 0.24
HMGA2-204ENST00000403681 HDGFL1Q5TGJ6 251 aa16.53■□□□□ 0.24
HMGA2-204ENST00000403681 BBXQ8WY36 941 aaPredicted RBP16.53■□□□□ 0.24
HMGA2-204ENST00000403681 SLC52A1Q9NWF4 448 aa16.53■□□□□ 0.24
HMGA2-204ENST00000403681 TRMT1Q9NXH9 659 aaKnown RBP16.52■□□□□ 0.24
HMGA2-204ENST00000403681 PAXBP1Q9Y5B6 917 aa16.52■□□□□ 0.24
HMGA2-204ENST00000403681 SYNMO15061 1565 aa16.52■□□□□ 0.24
HMGA2-204ENST00000403681 PUS7Q96PZ0 661 aaKnown RBP16.52■□□□□ 0.24
HMGA2-204ENST00000403681 U2AF2P26368 475 aaKnown RBP eCLIP16.52■□□□□ 0.236e-8■■□□□ 13.3
HMGA2-204ENST00000403681 DNM1Q05193 864 aaKnown RBP16.52■□□□□ 0.23
HMGA2-204ENST00000403681 LRRFIP2Q9Y608 721 aaKnown RBP16.52■□□□□ 0.23
HMGA2-204ENST00000403681 F13A1P00488 732 aa16.51■□□□□ 0.23
HMGA2-204ENST00000403681 PTGS1P23219 599 aa16.51■□□□□ 0.23
HMGA2-204ENST00000403681 HIP1O00291 1037 aa16.51■□□□□ 0.23
HMGA2-204ENST00000403681 KIF1BPQ96EK5 621 aa16.51■□□□□ 0.23
HMGA2-204ENST00000403681 FEZ1Q99689 392 aa16.51■□□□□ 0.23
HMGA2-204ENST00000403681 BCL2L12Q9HB09 334 aa16.51■□□□□ 0.23
HMGA2-204ENST00000403681 POLKQ9UBT6 870 aa16.51■□□□□ 0.23
HMGA2-204ENST00000403681 RTEL1-TNFRSF6BF6WH68 1400 aa16.51■□□□□ 0.23
HMGA2-204ENST00000403681 TRAPPC8Q9Y2L5 1435 aa16.5■□□□□ 0.23
HMGA2-204ENST00000403681 DDX19AQ9NUU7 478 aaKnown RBP16.5■□□□□ 0.23
HMGA2-204ENST00000403681 KRT24Q2M2I5 525 aa16.5■□□□□ 0.23
HMGA2-204ENST00000403681 CEP135Q66GS9 1140 aa16.5■□□□□ 0.23
HMGA2-204ENST00000403681 CEP57L1Q8IYX8 460 aa16.5■□□□□ 0.23
HMGA2-204ENST00000403681 KRT222Q8N1A0 295 aa16.5■□□□□ 0.23
HMGA2-204ENST00000403681 CFAP45Q9UL16 551 aa16.5■□□□□ 0.23
HMGA2-204ENST00000403681 PPIP5K1Q6PFW1 1433 aa16.5■□□□□ 0.23
HMGA2-204ENST00000403681 RAB11FIP3O75154 756 aa16.49■□□□□ 0.23
HMGA2-204ENST00000403681 ME1P48163 572 aa16.49■□□□□ 0.23
HMGA2-204ENST00000403681 GLRX3O76003 335 aaKnown RBP16.49■□□□□ 0.23
HMGA2-204ENST00000403681 WAPLQ7Z5K2 1190 aa16.49■□□□□ 0.23
HMGA2-204ENST00000403681 CHMLP26374 656 aa16.49■□□□□ 0.23
HMGA2-204ENST00000403681 CALCOCO1Q9P1Z2 691 aa16.49■□□□□ 0.23
HMGA2-204ENST00000403681 TRPM1Q7Z4N2 1603 aa16.49■□□□□ 0.23
HMGA2-204ENST00000403681 UBXN4Q92575 508 aa16.49■□□□□ 0.23
HMGA2-204ENST00000403681 TRERF1Q96PN7 1200 aa16.49■□□□□ 0.23
HMGA2-204ENST00000403681 OGFRQ9NZT2 677 aa16.49■□□□□ 0.23
HMGA2-204ENST00000403681 A0A1W2PP64 1363 aa16.48■□□□□ 0.23
HMGA2-204ENST00000403681 KIF2AO00139 706 aaPredicted RBP16.48■□□□□ 0.23
HMGA2-204ENST00000403681 SYT1P21579 422 aa16.48■□□□□ 0.23
HMGA2-204ENST00000403681 ABCC10Q5T3U5 1492 aa16.48■□□□□ 0.23
HMGA2-204ENST00000403681 SYNE3Q6ZMZ3 975 aa16.48■□□□□ 0.23
HMGA2-204ENST00000403681 PDLIM2Q96JY6 352 aa16.48■□□□□ 0.23
HMGA2-204ENST00000403681 PHF23Q9BUL5 403 aaPredicted RBP16.48■□□□□ 0.23
HMGA2-204ENST00000403681 CWC15Q9P013 229 aaKnown RBP16.48■□□□□ 0.23
HMGA2-204ENST00000403681 CPLX1O14810 134 aa16.48■□□□□ 0.23
HMGA2-204ENST00000403681 ANO6Q4KMQ2 910 aa16.48■□□□□ 0.23
HMGA2-204ENST00000403681 TXNDC2Q86VQ3 553 aa16.48■□□□□ 0.23
HMGA2-204ENST00000403681 PLCH2O75038 1416 aa16.48■□□□□ 0.23
HMGA2-204ENST00000403681 ERVK-7P63135 1459 aa16.47■□□□□ 0.23
HMGA2-204ENST00000403681 ZNF396Q96N95 335 aaPredicted RBP16.47■□□□□ 0.23
HMGA2-204ENST00000403681 DDX11Q96FC9 970 aa16.47■□□□□ 0.23
HMGA2-204ENST00000403681 KIF2CQ99661 725 aa16.47■□□□□ 0.23
HMGA2-204ENST00000403681 MAST1Q9Y2H9 1570 aa16.47■□□□□ 0.23
HMGA2-204ENST00000403681 CCP110O43303 1012 aa16.47■□□□□ 0.23
HMGA2-204ENST00000403681 NEMFO60524 1076 aa16.47■□□□□ 0.23
HMGA2-204ENST00000403681 DMTNQ08495 405 aa16.47■□□□□ 0.23
HMGA2-204ENST00000403681 FLIIQ13045 1269 aa16.47■□□□□ 0.23
HMGA2-204ENST00000403681 CCDC34Q96HJ3 373 aa16.47■□□□□ 0.23
HMGA2-204ENST00000403681 DACT1Q9NYF0 836 aa16.47■□□□□ 0.23
HMGA2-204ENST00000403681 NSFL1CQ9UNZ2 370 aaKnown RBP16.47■□□□□ 0.23
HMGA2-204ENST00000403681 TYRO3Q06418 890 aa16.46■□□□□ 0.23
HMGA2-204ENST00000403681 ERC1Q8IUD2 1116 aa16.46■□□□□ 0.23
HMGA2-204ENST00000403681 NECAB1Q8N987 351 aa16.46■□□□□ 0.23
HMGA2-204ENST00000403681 PLEKHF1Q96S99 279 aa16.46■□□□□ 0.23
HMGA2-204ENST00000403681 SMTNL1A8MU46 457 aa16.46■□□□□ 0.23
HMGA2-204ENST00000403681 AK2P54819 239 aa16.46■□□□□ 0.23
HMGA2-204ENST00000403681 IDI1Q13907 227 aa16.46■□□□□ 0.23
HMGA2-204ENST00000403681 CLEC17AQ6ZS10 378 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms