RNA–Protein interactions for RNA: ENST00000403160.4

COPS9-202, Transcript of COP9 signalosome subunit 9, humanhuman

TSL 2

Gene COPS9, Length 609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9-202ENST00000403160 HMGB2P26583 209 aaKnown RBP21.4■■□□□ 1.02
COPS9-202ENST00000403160 MAP3K5Q99683 1374 aa21.39■■□□□ 1.02
COPS9-202ENST00000403160 ZBED9Q6R2W3 1325 aa21.39■■□□□ 1.01
COPS9-202ENST00000403160 TFCP2L1Q9NZI6 479 aa21.39■■□□□ 1.01
COPS9-202ENST00000403160 C1orf141Q5JVX7 400 aa21.38■■□□□ 1.01
COPS9-202ENST00000403160 DCAF5Q96JK2 942 aa21.38■■□□□ 1.01
COPS9-202ENST00000403160 PNPLA7Q6ZV29 1317 aa21.37■■□□□ 1.01
COPS9-202ENST00000403160 HMOX1P09601 288 aa21.37■■□□□ 1.01
COPS9-202ENST00000403160 POLD1P28340 1107 aa21.37■■□□□ 1.01
COPS9-202ENST00000403160 QSER1Q2KHR3 1735 aa21.37■■□□□ 1.01
COPS9-202ENST00000403160 C5P01031 1676 aa21.37■■□□□ 1.01
COPS9-202ENST00000403160 SENP3-EIF4A1A0A087X0R7 540 aa21.35■■□□□ 1.01
COPS9-202ENST00000403160 ERVV-2B6SEH9 535 aa21.35■■□□□ 1.01
COPS9-202ENST00000403160 TUBGCP6Q96RT7 1819 aa21.34■■□□□ 1.01
COPS9-202ENST00000403160 TAF1LQ8IZX4 1826 aa21.34■■□□□ 1.01
COPS9-202ENST00000403160 KDM6AO15550 1401 aaPredicted RBP21.33■■□□□ 1.01
COPS9-202ENST00000403160 U2SURPO15042 1029 aaKnown RBP21.33■■□□□ 1.01
COPS9-202ENST00000403160 ASAP1Q9ULH1 1129 aa21.33■■□□□ 1.01
COPS9-202ENST00000403160 CABP4P57796 275 aa21.32■■□□□ 1
COPS9-202ENST00000403160 LOC102724428A0A0B4J2F2 783 aa21.3■■□□□ 1
COPS9-202ENST00000403160 SIK1P57059 783 aa21.3■■□□□ 1
COPS9-202ENST00000403160 AKAP4Q5JQC9 854 aa21.3■■□□□ 1
COPS9-202ENST00000403160 CCDC146Q8IYE0 955 aa21.3■■□□□ 1
COPS9-202ENST00000403160 ATG3Q9NT62 314 aa21.3■■□□□ 1
COPS9-202ENST00000403160 COL24A1Q17RW2 1714 aa21.29■■□□□ 1
COPS9-202ENST00000403160 NUDCQ9Y266 331 aa21.29■■□□□ 1
COPS9-202ENST00000403160 C4BP0C0L5 1744 aa21.29■■□□□ 1
COPS9-202ENST00000403160 SCN11AQ9UI33 1791 aa21.28■■□□□ 1
COPS9-202ENST00000403160 MSH5O43196 834 aa21.28■■□□□ 1
COPS9-202ENST00000403160 GPR162Q16538 588 aa21.28■■□□□ 1
COPS9-202ENST00000403160 ATP6V1AP38606 617 aa21.27■■□□□ 1
COPS9-202ENST00000403160 COL23A1Q86Y22 540 aaPredicted RBP21.27■■□□□ 1
COPS9-202ENST00000403160 KLHL34Q8N239 644 aa21.27■■□□□ 1
COPS9-202ENST00000403160 ZNF784Q8NCA9 323 aaPredicted RBP21.27■■□□□ 1
COPS9-202ENST00000403160 FLAD1Q8NFF5 587 aa21.27■■□□□ 1
COPS9-202ENST00000403160 AK7Q96M32 723 aa21.27■■□□□ 1
COPS9-202ENST00000403160 CHD4Q14839 1912 aa21.26■□□□□ 0.99
COPS9-202ENST00000403160 U2AF1L5P0DN76 240 aaPredicted RBP21.26■□□□□ 0.99
COPS9-202ENST00000403160 U2AF1Q01081 240 aaKnown RBP eCLIP21.26■□□□□ 0.99
COPS9-202ENST00000403160 MTHFSDQ2M296 383 aaKnown RBP21.26■□□□□ 0.99
COPS9-202ENST00000403160 NFATC2IPQ8NCF5 419 aa21.26■□□□□ 0.99
COPS9-202ENST00000403160 SALL2Q9Y467 1007 aaPredicted RBP21.26■□□□□ 0.99
COPS9-202ENST00000403160 RBM42Q9BTD8 480 aaKnown RBP21.25■□□□□ 0.99
COPS9-202ENST00000403160 LINC00116Q8NCU8 138 aa21.24■□□□□ 0.99
COPS9-202ENST00000403160 VIRMAQ69YN4 1812 aaKnown RBP21.24■□□□□ 0.99
COPS9-202ENST00000403160 ITPK1Q13572 414 aa21.23■□□□□ 0.99
COPS9-202ENST00000403160 RUNDC1Q96C34 613 aa21.22■□□□□ 0.99
COPS9-202ENST00000403160 LGR6Q9HBX8 967 aa21.22■□□□□ 0.99
COPS9-202ENST00000403160 UBR3Q6ZT12 1888 aa21.22■□□□□ 0.99
COPS9-202ENST00000403160 ZNF831Q5JPB2 1677 aa21.21■□□□□ 0.99
COPS9-202ENST00000403160 APAF1O14727 1248 aa21.21■□□□□ 0.99
COPS9-202ENST00000403160 RNMTO43148 476 aaKnown RBP21.21■□□□□ 0.99
COPS9-202ENST00000403160 GAS2L2Q8NHY3 880 aa21.21■□□□□ 0.99
COPS9-202ENST00000403160 SLC52A2Q9HAB3 445 aa21.21■□□□□ 0.99
COPS9-202ENST00000403160 PHF14O94880 888 aa21.2■□□□□ 0.98
COPS9-202ENST00000403160 PTCD1O75127 700 aaKnown RBP21.19■□□□□ 0.98
COPS9-202ENST00000403160 PRKAR2BP31323 418 aa21.19■□□□□ 0.98
COPS9-202ENST00000403160 PELP1Q8IZL8 1130 aaKnown RBP21.19■□□□□ 0.98
COPS9-202ENST00000403160 NLGN2Q8NFZ4 835 aa21.19■□□□□ 0.98
COPS9-202ENST00000403160 SLC4A9Q96Q91 983 aa21.19■□□□□ 0.98
COPS9-202ENST00000403160 RSPH6AQ9H0K4 717 aa21.19■□□□□ 0.98
COPS9-202ENST00000403160 MRC1P22897 1456 aa21.19■□□□□ 0.98
COPS9-202ENST00000403160 ADAMTS7Q9UKP4 1686 aa21.18■□□□□ 0.98
COPS9-202ENST00000403160 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.18■□□□□ 0.98
COPS9-202ENST00000403160 GNPATO15228 680 aa21.18■□□□□ 0.98
COPS9-202ENST00000403160 SSFA2P28290 1259 aa21.18■□□□□ 0.98
COPS9-202ENST00000403160 GNAT3A8MTJ3 354 aa21.17■□□□□ 0.98
COPS9-202ENST00000403160 GRIN3BO60391 1043 aa21.17■□□□□ 0.98
COPS9-202ENST00000403160 AMIGO3Q86WK7 504 aa21.17■□□□□ 0.98
COPS9-202ENST00000403160 COL5A3P25940 1745 aaPredicted RBP21.17■□□□□ 0.98
COPS9-202ENST00000403160 UTRNP46939 3433 aa21.16■□□□□ 0.98
COPS9-202ENST00000403160 MSL1Q68DK7 614 aa21.16■□□□□ 0.98
COPS9-202ENST00000403160 PHACTR3Q96KR7 559 aa21.16■□□□□ 0.98
COPS9-202ENST00000403160 CD2APQ9Y5K6 639 aa21.16■□□□□ 0.98
COPS9-202ENST00000403160 FCHSD2O94868 740 aa21.15■□□□□ 0.98
COPS9-202ENST00000403160 SMIM5Q71RC9 77 aa21.15■□□□□ 0.98
COPS9-202ENST00000403160 NGEFQ8N5V2 710 aa21.14■□□□□ 0.97
COPS9-202ENST00000403160 PLEKHF1Q96S99 279 aa21.14■□□□□ 0.97
COPS9-202ENST00000403160 RTCBQ9Y3I0 505 aaKnown RBP21.14■□□□□ 0.97
COPS9-202ENST00000403160 ZNF521Q96K83 1311 aa21.13■□□□□ 0.97
COPS9-202ENST00000403160 CNTNAP4Q9C0A0 1308 aa21.13■□□□□ 0.97
COPS9-202ENST00000403160 RC3H1Q5TC82 1133 aaKnown RBP21.13■□□□□ 0.97
COPS9-202ENST00000403160 PNNQ9H307 717 aaKnown RBP21.13■□□□□ 0.97
COPS9-202ENST00000403160 MAPK8IP3Q9UPT6 1336 aa21.12■□□□□ 0.97
COPS9-202ENST00000403160 TEFQ10587 303 aa21.12■□□□□ 0.97
COPS9-202ENST00000403160 SLC39A6Q13433 755 aa21.12■□□□□ 0.97
COPS9-202ENST00000403160 RRP7AQ9Y3A4 280 aaKnown RBP21.12■□□□□ 0.97
COPS9-202ENST00000403160 TJP1Q07157 1748 aa21.12■□□□□ 0.97
COPS9-202ENST00000403160 CICQ96RK0 1608 aaPredicted RBP21.11■□□□□ 0.97
COPS9-202ENST00000403160 TRAPPC3LQ5T215 181 aa21.11■□□□□ 0.97
COPS9-202ENST00000403160 IL17REQ8NFR9 667 aa21.11■□□□□ 0.97
COPS9-202ENST00000403160 CDCA7LQ96GN5 454 aa21.1■□□□□ 0.97
COPS9-202ENST00000403160 MYH14Q7Z406 1995 aaKnown RBP21.09■□□□□ 0.97
COPS9-202ENST00000403160 RPS6KA4O75676 772 aa21.09■□□□□ 0.97
COPS9-202ENST00000403160 NEFMP07197 916 aa21.09■□□□□ 0.97
COPS9-202ENST00000403160 YBX3P16989 372 aaKnown RBP eCLIP21.09■□□□□ 0.97
COPS9-202ENST00000403160 ADRA2BP18089 450 aa21.09■□□□□ 0.97
COPS9-202ENST00000403160 CRKLP46109 303 aaKnown RBP21.09■□□□□ 0.97
COPS9-202ENST00000403160 NEUROD2Q15784 382 aa21.09■□□□□ 0.97
COPS9-202ENST00000403160 TTC5Q8N0Z6 440 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms