RNA–Protein interactions for RNA: ENST00000402697.5

PRAME-203, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-203ENST00000402697 KIF2CQ99661 725 aa16.1■□□□□ 0.17
PRAME-203ENST00000402697 K7ELQ4 463 aaPredicted RBP16.1■□□□□ 0.17
PRAME-203ENST00000402697 GNAI2P04899 355 aa16.1■□□□□ 0.17
PRAME-203ENST00000402697 RGPD2P0DJD1 1756 aa16.1■□□□□ 0.17
PRAME-203ENST00000402697 GSPT1P15170 499 aaKnown RBP16.09■□□□□ 0.17
PRAME-203ENST00000402697 XPCQ01831 940 aaPredicted RBP16.09■□□□□ 0.17
PRAME-203ENST00000402697 KRT24Q2M2I5 525 aa16.09■□□□□ 0.17
PRAME-203ENST00000402697 GBP4Q96PP9 640 aa16.09■□□□□ 0.17
PRAME-203ENST00000402697 FAM208AQ9UK61 1670 aaKnown RBP16.09■□□□□ 0.17
PRAME-203ENST00000402697 HOXB7P09629 217 aa16.09■□□□□ 0.17
PRAME-203ENST00000402697 TAF7Q15545 349 aaPredicted RBP16.09■□□□□ 0.17
PRAME-203ENST00000402697 MEIS3Q99687 375 aa16.09■□□□□ 0.17
PRAME-203ENST00000402697 REC8O95072 547 aa16.08■□□□□ 0.16
PRAME-203ENST00000402697 SKOR2Q2VWA4 1001 aaPredicted RBP16.08■□□□□ 0.16
PRAME-203ENST00000402697 KCNH5Q8NCM2 988 aa16.07■□□□□ 0.16
PRAME-203ENST00000402697 ATF3P18847 181 aa16.06■□□□□ 0.16
PRAME-203ENST00000402697 RAB3GAP1Q15042 981 aa16.06■□□□□ 0.16
PRAME-203ENST00000402697 CLEC17AQ6ZS10 378 aa16.06■□□□□ 0.16
PRAME-203ENST00000402697 IP6K1Q92551 441 aa16.06■□□□□ 0.16
PRAME-203ENST00000402697 LTV1Q96GA3 475 aaPredicted RBP16.06■□□□□ 0.16
PRAME-203ENST00000402697 MED1Q15648 1581 aaPredicted RBP16.06■□□□□ 0.16
PRAME-203ENST00000402697 FLIIQ13045 1269 aa16.06■□□□□ 0.16
PRAME-203ENST00000402697 SRCIN1Q9C0H9 1055 aa16.06■□□□□ 0.16
PRAME-203ENST00000402697 CRYBG1Q9Y4K1 1723 aa16.05■□□□□ 0.16
PRAME-203ENST00000402697 EPB41L2O43491 1005 aaKnown RBP16.05■□□□□ 0.16
PRAME-203ENST00000402697 HSP90AA1P07900 732 aaKnown RBP16.05■□□□□ 0.16
PRAME-203ENST00000402697 USP26Q9BXU7 913 aa16.05■□□□□ 0.16
PRAME-203ENST00000402697 CAMTA1Q9Y6Y1 1673 aa16.05■□□□□ 0.16
PRAME-203ENST00000402697 CEMIPQ8WUJ3 1361 aa16.04■□□□□ 0.16
PRAME-203ENST00000402697 RGPD5Q99666 1765 aa16.04■□□□□ 0.16
PRAME-203ENST00000402697 KRT28Q7Z3Y7 464 aa16.04■□□□□ 0.16
PRAME-203ENST00000402697 AOX1Q06278 1338 aa16.04■□□□□ 0.16
PRAME-203ENST00000402697 TRAK2O60296 914 aa16.04■□□□□ 0.16
PRAME-203ENST00000402697 ATP8B2P98198 1209 aa16.04■□□□□ 0.16
PRAME-203ENST00000402697 SDSP20132 328 aa16.03■□□□□ 0.16
PRAME-203ENST00000402697 CADPS2Q86UW7 1296 aa16.03■□□□□ 0.16
PRAME-203ENST00000402697 USHBP1Q8N6Y0 703 aa16.03■□□□□ 0.16
PRAME-203ENST00000402697 OVOS2A0A0G2JMS6 1433 aa16.03■□□□□ 0.16
PRAME-203ENST00000402697 FSD2A1L4K1 749 aa16.03■□□□□ 0.16
PRAME-203ENST00000402697 GCP02774 474 aa16.03■□□□□ 0.16
PRAME-203ENST00000402697 G2E3Q7L622 706 aa16.03■□□□□ 0.16
PRAME-203ENST00000402697 SPRYD3Q8NCJ5 442 aa16.03■□□□□ 0.16
PRAME-203ENST00000402697 IL17REQ8NFR9 667 aa16.03■□□□□ 0.16
PRAME-203ENST00000402697 CWC22Q9HCG8 908 aaKnown RBP16.03■□□□□ 0.16
PRAME-203ENST00000402697 PXDNQ92626 1479 aa16.02■□□□□ 0.16
PRAME-203ENST00000402697 FKBP5Q13451 457 aaPredicted RBP16.02■□□□□ 0.15
PRAME-203ENST00000402697 SLC4A10Q6U841 1118 aa16.02■□□□□ 0.15
PRAME-203ENST00000402697 MIS18AQ9NYP9 233 aa16.02■□□□□ 0.15
PRAME-203ENST00000402697 NCAPD2Q15021 1401 aa16.02■□□□□ 0.15
PRAME-203ENST00000402697 GOLGA6L3A6NEY3 463 aa16.01■□□□□ 0.15
PRAME-203ENST00000402697 GOLGA6L22H0YM25 854 aa16.01■□□□□ 0.15
PRAME-203ENST00000402697 ERC2O15083 957 aa16.01■□□□□ 0.15
PRAME-203ENST00000402697 ST18O60284 1047 aa16.01■□□□□ 0.15
PRAME-203ENST00000402697 PDE1AP54750 535 aa16.01■□□□□ 0.15
PRAME-203ENST00000402697 LRRCC1Q9C099 1032 aa16.01■□□□□ 0.15
PRAME-203ENST00000402697 NUCB2P80303 420 aa16.01■□□□□ 0.15
PRAME-203ENST00000402697 ARHGEF25Q86VW2 580 aa16.01■□□□□ 0.15
PRAME-203ENST00000402697 NBPF6Q5VWK0 638 aa16■□□□□ 0.15
PRAME-203ENST00000402697 C16orf71Q8IYS4 520 aaPredicted RBP16■□□□□ 0.15
PRAME-203ENST00000402697 TNPO1Q92973 898 aaKnown RBP16■□□□□ 0.15
PRAME-203ENST00000402697 NBPF4Q96M43 638 aa16■□□□□ 0.15
PRAME-203ENST00000402697 STAP2Q9UGK3 403 aa16■□□□□ 0.15
PRAME-203ENST00000402697 ZNF335Q9H4Z2 1342 aaPredicted RBP16■□□□□ 0.15
PRAME-203ENST00000402697 IBTKQ9P2D0 1353 aaPredicted RBP16■□□□□ 0.15
PRAME-203ENST00000402697 LMO7Q8WWI1 1683 aa16■□□□□ 0.15
PRAME-203ENST00000402697 ZBTB7CA1YPR0 619 aa15.99■□□□□ 0.15
PRAME-203ENST00000402697 RAB11FIP3O75154 756 aa15.99■□□□□ 0.15
PRAME-203ENST00000402697 PLEKHG5O94827 1062 aa15.99■□□□□ 0.15
PRAME-203ENST00000402697 MCM2P49736 904 aa15.99■□□□□ 0.15
PRAME-203ENST00000402697 AMOTQ4VCS5 1084 aa15.99■□□□□ 0.15
PRAME-203ENST00000402697 DDX17Q92841 729 aaKnown RBP15.99■□□□□ 0.15
PRAME-203ENST00000402697 HDAC5Q9UQL6 1122 aa15.99■□□□□ 0.15
PRAME-203ENST00000402697 SALL3Q9BXA9 1300 aa15.99■□□□□ 0.15
PRAME-203ENST00000402697 LMOD2Q6P5Q4 547 aa15.99■□□□□ 0.15
PRAME-203ENST00000402697 BRPF3Q9ULD4 1205 aa15.99■□□□□ 0.15
PRAME-203ENST00000402697 TNS3Q68CZ2 1445 aa15.99■□□□□ 0.15
PRAME-203ENST00000402697 COL18A1P39060 1754 aa15.99■□□□□ 0.15
PRAME-203ENST00000402697 F6X3S4 739 aa15.98■□□□□ 0.15
PRAME-203ENST00000402697 KDM3BQ7LBC6 1761 aa15.98■□□□□ 0.15
PRAME-203ENST00000402697 NPHP3Q7Z494 1330 aa15.98■□□□□ 0.15
PRAME-203ENST00000402697 MRE11P49959 708 aa15.98■□□□□ 0.15
PRAME-203ENST00000402697 PLEKHO1Q53GL0 409 aaPredicted RBP15.98■□□□□ 0.15
PRAME-203ENST00000402697 HDGFL1Q5TGJ6 251 aa15.98■□□□□ 0.15
PRAME-203ENST00000402697 FAM43AQ8N2R8 423 aa15.98■□□□□ 0.15
PRAME-203ENST00000402697 IL17RAQ96F46 866 aa15.98■□□□□ 0.15
PRAME-203ENST00000402697 TUBGCP6Q96RT7 1819 aa15.97■□□□□ 0.15
PRAME-203ENST00000402697 MCCP23508 829 aa15.97■□□□□ 0.15
PRAME-203ENST00000402697 ANAPC15P60006 121 aa15.97■□□□□ 0.15
PRAME-203ENST00000402697 AKAP4Q5JQC9 854 aa15.97■□□□□ 0.15
PRAME-203ENST00000402697 LRRC59Q96AG4 307 aaKnown RBP15.97■□□□□ 0.15
PRAME-203ENST00000402697 UBTFL1P0CB47 393 aaPredicted RBP15.96■□□□□ 0.15
PRAME-203ENST00000402697 SSH3Q8TE77 659 aa15.96■□□□□ 0.15
PRAME-203ENST00000402697 SMARCA5O60264 1052 aaPredicted RBP15.96■□□□□ 0.15
PRAME-203ENST00000402697 MX1P20591 662 aa15.96■□□□□ 0.15
PRAME-203ENST00000402697 HSP90AB4PQ58FF6 505 aa15.96■□□□□ 0.15
PRAME-203ENST00000402697 OTUD7AQ8TE49 926 aaPredicted RBP15.96■□□□□ 0.15
PRAME-203ENST00000402697 PLEKHG2Q9H7P9 1386 aa15.95■□□□□ 0.14
PRAME-203ENST00000402697 CD2BP2O95400 341 aaKnown RBP15.95■□□□□ 0.14
PRAME-203ENST00000402697 EIF4A1P60842 406 aaKnown RBP15.95■□□□□ 0.14
PRAME-203ENST00000402697 USP44Q9H0E7 712 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms