RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 ABCA3Q99758 1704 aa15.46■□□□□ 0.07
CLIP4-203ENST00000401617 NUCB1Q02818 461 aa15.46■□□□□ 0.07
CLIP4-203ENST00000401617 MPRIPQ6WCQ1 1025 aa15.45■□□□□ 0.06
CLIP4-203ENST00000401617 GCC1Q96CN9 775 aa15.45■□□□□ 0.06
CLIP4-203ENST00000401617 PKD1L3Q7Z443 1732 aa15.45■□□□□ 0.06
CLIP4-203ENST00000401617 TEFQ10587 303 aa15.45■□□□□ 0.06
CLIP4-203ENST00000401617 C1orf115Q9H7X2 142 aa15.45■□□□□ 0.06
CLIP4-203ENST00000401617 HEG1Q9ULI3 1381 aa15.44■□□□□ 0.06
CLIP4-203ENST00000401617 ATP10DQ9P241 1426 aa15.44■□□□□ 0.06
CLIP4-203ENST00000401617 CCT4P50991 539 aaKnown RBP15.43■□□□□ 0.06
CLIP4-203ENST00000401617 FLIIQ13045 1269 aa15.43■□□□□ 0.06
CLIP4-203ENST00000401617 RAPGEF4Q8WZA2 1011 aa15.43■□□□□ 0.06
CLIP4-203ENST00000401617 NLRP2Q9NX02 1062 aa15.43■□□□□ 0.06
CLIP4-203ENST00000401617 MEGF6O75095 1541 aa15.43■□□□□ 0.06
CLIP4-203ENST00000401617 CHRNA2Q15822 529 aa15.43■□□□□ 0.06
CLIP4-203ENST00000401617 CHMP4AQ9BY43 222 aa15.43■□□□□ 0.06
CLIP4-203ENST00000401617 PXDNLA1KZ92 1463 aa15.42■□□□□ 0.06
CLIP4-203ENST00000401617 BTBD11A6QL63 1104 aa15.42■□□□□ 0.06
CLIP4-203ENST00000401617 TATP17735 454 aaPredicted RBP15.42■□□□□ 0.06
CLIP4-203ENST00000401617 ANKRD44Q8N8A2 993 aa15.42■□□□□ 0.06
CLIP4-203ENST00000401617 KCNQ3O43525 872 aa15.42■□□□□ 0.06
CLIP4-203ENST00000401617 F6X3S4 739 aa15.41■□□□□ 0.06
CLIP4-203ENST00000401617 HDGFL1Q5TGJ6 251 aa15.41■□□□□ 0.06
CLIP4-203ENST00000401617 CHD1LQ86WJ1 897 aa15.41■□□□□ 0.06
CLIP4-203ENST00000401617 RPAP2Q8IXW5 612 aaPredicted RBP15.41■□□□□ 0.06
CLIP4-203ENST00000401617 MEIS3Q99687 375 aa15.41■□□□□ 0.06
CLIP4-203ENST00000401617 SPG7Q9UQ90 795 aa15.41■□□□□ 0.06
CLIP4-203ENST00000401617 KDM6AO15550 1401 aaPredicted RBP15.4■□□□□ 0.06
CLIP4-203ENST00000401617 PHKG2P15735 406 aa15.4■□□□□ 0.06
CLIP4-203ENST00000401617 NPM2Q86SE8 214 aaKnown RBP15.4■□□□□ 0.06
CLIP4-203ENST00000401617 DCTPP1Q9H773 170 aa15.4■□□□□ 0.06
CLIP4-203ENST00000401617 CEP85Q6P2H3 762 aa15.39■□□□□ 0.05
CLIP4-203ENST00000401617 MRC1P22897 1456 aa15.39■□□□□ 0.05
CLIP4-203ENST00000401617 CSB-PGBD3P0DP91 1061 aa15.39■□□□□ 0.05
CLIP4-203ENST00000401617 NECTIN2Q92692 538 aa15.39■□□□□ 0.05
CLIP4-203ENST00000401617 WDR17Q8IZU2 1322 aa15.38■□□□□ 0.05
CLIP4-203ENST00000401617 FKBP5Q13451 457 aaPredicted RBP15.38■□□□□ 0.05
CLIP4-203ENST00000401617 NOP58Q9Y2X3 529 aaKnown RBP15.38■□□□□ 0.05
CLIP4-203ENST00000401617 PARP4Q9UKK3 1724 aaKnown RBP15.38■□□□□ 0.05
CLIP4-203ENST00000401617 IFNL2Q8IZJ0 200 aa15.38■□□□□ 0.05
CLIP4-203ENST00000401617 LNPKQ9C0E8 428 aa15.38■□□□□ 0.05
CLIP4-203ENST00000401617 COL5A2P05997 1499 aaPredicted RBP15.37■□□□□ 0.05
CLIP4-203ENST00000401617 GIGYF1O75420 1035 aaPredicted RBP15.37■□□□□ 0.05
CLIP4-203ENST00000401617 ANKRD45Q5TZF3 282 aa15.37■□□□□ 0.05
CLIP4-203ENST00000401617 PRDM11Q9NQV5 511 aa15.37■□□□□ 0.05
CLIP4-203ENST00000401617 SLC4A10Q6U841 1118 aa15.36■□□□□ 0.05
CLIP4-203ENST00000401617 SLC52A2Q9HAB3 445 aa15.36■□□□□ 0.05
CLIP4-203ENST00000401617 CYP27B1O15528 508 aa15.36■□□□□ 0.05
CLIP4-203ENST00000401617 SEC24BO95487 1268 aa15.36■□□□□ 0.05
CLIP4-203ENST00000401617 PHAXQ9H814 394 aaKnown RBP15.36■□□□□ 0.05
CLIP4-203ENST00000401617 EIF2S2P20042 333 aaKnown RBP15.35■□□□□ 0.05
CLIP4-203ENST00000401617 CHPF2Q9P2E5 772 aa15.35■□□□□ 0.05
CLIP4-203ENST00000401617 DDRGK1Q96HY6 314 aa15.35■□□□□ 0.05
CLIP4-203ENST00000401617 ZBTB47Q9UFB7 747 aaPredicted RBP15.35■□□□□ 0.05
CLIP4-203ENST00000401617 GNAI3P08754 354 aa15.34■□□□□ 0.05
CLIP4-203ENST00000401617 DCAF5Q96JK2 942 aa15.34■□□□□ 0.05
CLIP4-203ENST00000401617 ANP32EQ9BTT0 268 aa15.34■□□□□ 0.05
CLIP4-203ENST00000401617 GNAI2P04899 355 aa15.34■□□□□ 0.05
CLIP4-203ENST00000401617 HSP90AB1P08238 724 aaKnown RBP15.34■□□□□ 0.05
CLIP4-203ENST00000401617 DBF4Q9UBU7 674 aaPredicted RBP15.34■□□□□ 0.05
CLIP4-203ENST00000401617 BMP2KLQ5H9B9 411 aa15.33■□□□□ 0.04
CLIP4-203ENST00000401617 ZNF790Q6PG37 636 aa15.33■□□□□ 0.04
CLIP4-203ENST00000401617 CARD10Q9BWT7 1032 aa15.33■□□□□ 0.04
CLIP4-203ENST00000401617 C5P01031 1676 aa15.33■□□□□ 0.04
CLIP4-203ENST00000401617 USP44Q9H0E7 712 aa15.32■□□□□ 0.04
CLIP4-203ENST00000401617 AHDC1Q5TGY3 1603 aaPredicted RBP15.32■□□□□ 0.04
CLIP4-203ENST00000401617 HMMRO75330 724 aa15.32■□□□□ 0.04
CLIP4-203ENST00000401617 SHANK3Q9BYB0 1731 aa15.32■□□□□ 0.04
CLIP4-203ENST00000401617 LTBP4Q8N2S1 1624 aa15.32■□□□□ 0.04
CLIP4-203ENST00000401617 NFATC2IPQ8NCF5 419 aa15.31■□□□□ 0.04
CLIP4-203ENST00000401617 ROBO1Q9Y6N7 1651 aa15.31■□□□□ 0.04
CLIP4-203ENST00000401617 ADCY9O60503 1353 aa15.31■□□□□ 0.04
CLIP4-203ENST00000401617 BEND3Q5T5X7 828 aa15.3■□□□□ 0.04
CLIP4-203ENST00000401617 TOM1L2Q6ZVM7 507 aa15.3■□□□□ 0.04
CLIP4-203ENST00000401617 DNAAF4Q8WXU2 420 aa15.3■□□□□ 0.04
CLIP4-203ENST00000401617 COL22A1Q8NFW1 1626 aaPredicted RBP15.3■□□□□ 0.04
CLIP4-203ENST00000401617 PRAMEF22A3QJZ6 481 aa15.29■□□□□ 0.04
CLIP4-203ENST00000401617 ATP8B2P98198 1209 aa15.29■□□□□ 0.04
CLIP4-203ENST00000401617 ERICH6Q7L0X2 663 aa15.29■□□□□ 0.04
CLIP4-203ENST00000401617 SRCIN1Q9C0H9 1055 aa15.29■□□□□ 0.04
CLIP4-203ENST00000401617 HYPKQ9NX55 129 aa15.29■□□□□ 0.04
CLIP4-203ENST00000401617 PI4KAP2A4QPH2 592 aa15.29■□□□□ 0.04
CLIP4-203ENST00000401617 SLC39A6Q13433 755 aa15.29■□□□□ 0.04
CLIP4-203ENST00000401617 PDIA6Q15084 440 aa15.29■□□□□ 0.04
CLIP4-203ENST00000401617 NKX1-1Q15270 411 aaPredicted RBP15.29■□□□□ 0.04
CLIP4-203ENST00000401617 PLEKHM2Q8IWE5 1019 aa15.29■□□□□ 0.04
CLIP4-203ENST00000401617 PI4KAP1Q8N8J0 262 aa15.29■□□□□ 0.04
CLIP4-203ENST00000401617 ZCRB1Q8TBF4 217 aaKnown RBP15.29■□□□□ 0.04
CLIP4-203ENST00000401617 DDX21Q9NR30 783 aaKnown RBP eCLIP15.29■□□□□ 0.04
CLIP4-203ENST00000401617 GLI3P10071 1580 aa15.29■□□□□ 0.04
CLIP4-203ENST00000401617 PROSER3Q2NL68 480 aa15.28■□□□□ 0.04
CLIP4-203ENST00000401617 TBC1D32Q96NH3 1257 aa15.28■□□□□ 0.04
CLIP4-203ENST00000401617 PCDH11XQ9BZA7 1347 aa15.28■□□□□ 0.04
CLIP4-203ENST00000401617 PCDH11YQ9BZA8 1340 aa15.28■□□□□ 0.04
CLIP4-203ENST00000401617 ANXA1P04083 346 aa15.28■□□□□ 0.04
CLIP4-203ENST00000401617 IL2RBP14784 551 aa15.27■□□□□ 0.04
CLIP4-203ENST00000401617 IBTKQ9P2D0 1353 aaPredicted RBP15.27■□□□□ 0.03
CLIP4-203ENST00000401617 COL14A1Q05707 1796 aaKnown RBP15.27■□□□□ 0.03
CLIP4-203ENST00000401617 UBR2Q8IWV8 1755 aa15.27■□□□□ 0.03
CLIP4-203ENST00000401617 UBTFL1P0CB47 393 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms