RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 FAM98CQ17RN3 349 aaKnown RBP20.21■□□□□ 0.83
CHRFAM7A-203ENST00000401522 EXOC5O00471 708 aa20.19■□□□□ 0.82
CHRFAM7A-203ENST00000401522 RLBP1P12271 317 aa20.19■□□□□ 0.82
CHRFAM7A-203ENST00000401522 ZNF530Q6P9A1 599 aaPredicted RBP20.19■□□□□ 0.82
CHRFAM7A-203ENST00000401522 AKAP4Q5JQC9 854 aa20.19■□□□□ 0.82
CHRFAM7A-203ENST00000401522 TRIM35Q9UPQ4 493 aa20.19■□□□□ 0.82
CHRFAM7A-203ENST00000401522 IL16Q14005 1332 aa20.18■□□□□ 0.82
CHRFAM7A-203ENST00000401522 HTATSF1O43719 755 aaKnown RBP20.18■□□□□ 0.82
CHRFAM7A-203ENST00000401522 RWDD1Q9H446 243 aaPredicted RBP20.18■□□□□ 0.82
CHRFAM7A-203ENST00000401522 PCDH11XQ9BZA7 1347 aa20.18■□□□□ 0.82
CHRFAM7A-203ENST00000401522 PCDH11YQ9BZA8 1340 aa20.18■□□□□ 0.82
CHRFAM7A-203ENST00000401522 DLG5Q8TDM6 1919 aa20.18■□□□□ 0.82
CHRFAM7A-203ENST00000401522 GNAT3A8MTJ3 354 aa20.17■□□□□ 0.82
CHRFAM7A-203ENST00000401522 CYP27B1O15528 508 aa20.17■□□□□ 0.82
CHRFAM7A-203ENST00000401522 RBM6P78332 1123 aaKnown RBP20.17■□□□□ 0.82
CHRFAM7A-203ENST00000401522 DDB1Q16531 1140 aa20.17■□□□□ 0.82
CHRFAM7A-203ENST00000401522 IFNL2Q8IZJ0 200 aa20.17■□□□□ 0.82
CHRFAM7A-203ENST00000401522 PCDHB15Q9Y5E8 787 aa20.17■□□□□ 0.82
CHRFAM7A-203ENST00000401522 PHKG2P15735 406 aa20.17■□□□□ 0.82
CHRFAM7A-203ENST00000401522 LMOD3Q0VAK6 560 aa20.17■□□□□ 0.82
CHRFAM7A-203ENST00000401522 C1orf141Q5JVX7 400 aa20.17■□□□□ 0.82
CHRFAM7A-203ENST00000401522 ZKSCAN2Q63HK3 967 aa20.17■□□□□ 0.82
CHRFAM7A-203ENST00000401522 THSD7AQ9UPZ6 1657 aa20.17■□□□□ 0.82
CHRFAM7A-203ENST00000401522 MAP3K5Q99683 1374 aa20.16■□□□□ 0.82
CHRFAM7A-203ENST00000401522 SLC4A3P48751 1232 aa20.16■□□□□ 0.82
CHRFAM7A-203ENST00000401522 MVPQ14764 893 aaKnown RBP20.16■□□□□ 0.82
CHRFAM7A-203ENST00000401522 BCL2L13Q9BXK5 485 aa20.16■□□□□ 0.82
CHRFAM7A-203ENST00000401522 SHANK3Q9BYB0 1731 aa20.16■□□□□ 0.82
CHRFAM7A-203ENST00000401522 TNS2Q63HR2 1409 aa20.15■□□□□ 0.82
CHRFAM7A-203ENST00000401522 TNNQ9UQP3 1299 aa20.15■□□□□ 0.82
CHRFAM7A-203ENST00000401522 LRRC37A3O60309 1634 aa20.15■□□□□ 0.82
CHRFAM7A-203ENST00000401522 DDX54Q8TDD1 881 aaKnown RBP20.14■□□□□ 0.81
CHRFAM7A-203ENST00000401522 RTF1Q92541 710 aaKnown RBP20.14■□□□□ 0.81
CHRFAM7A-203ENST00000401522 RXRBP28702 533 aa20.14■□□□□ 0.81
CHRFAM7A-203ENST00000401522 NKX1-1Q15270 411 aaPredicted RBP20.14■□□□□ 0.81
CHRFAM7A-203ENST00000401522 NFKBIBQ15653 356 aa20.14■□□□□ 0.81
CHRFAM7A-203ENST00000401522 DZIP1LQ8IYY4 767 aaKnown RBP20.14■□□□□ 0.81
CHRFAM7A-203ENST00000401522 HSP90AB1P08238 724 aaKnown RBP20.13■□□□□ 0.81
CHRFAM7A-203ENST00000401522 POTEAQ6S8J7 498 aa20.13■□□□□ 0.81
CHRFAM7A-203ENST00000401522 FTSJ3Q8IY81 847 aaKnown RBP20.13■□□□□ 0.81
CHRFAM7A-203ENST00000401522 SEPT12Q8IYM1 358 aa20.12■□□□□ 0.81
CHRFAM7A-203ENST00000401522 IL17REQ8NFR9 667 aa20.12■□□□□ 0.81
CHRFAM7A-203ENST00000401522 MCM10Q7L590 875 aa20.12■□□□□ 0.81
CHRFAM7A-203ENST00000401522 DCAF5Q96JK2 942 aa20.12■□□□□ 0.81
CHRFAM7A-203ENST00000401522 PDZRN3Q9UPQ7 1066 aa20.12■□□□□ 0.81
CHRFAM7A-203ENST00000401522 A0A0G2JS52 829 aa20.11■□□□□ 0.81
CHRFAM7A-203ENST00000401522 EXOSC9Q06265 439 aaKnown RBP20.11■□□□□ 0.81
CHRFAM7A-203ENST00000401522 DCTN1Q14203 1278 aa20.11■□□□□ 0.81
CHRFAM7A-203ENST00000401522 MPRIPQ6WCQ1 1025 aa20.11■□□□□ 0.81
CHRFAM7A-203ENST00000401522 TSR2Q969E8 191 aaKnown RBP20.11■□□□□ 0.81
CHRFAM7A-203ENST00000401522 LGR6Q9HBX8 967 aa20.1■□□□□ 0.81
CHRFAM7A-203ENST00000401522 SMC4Q9NTJ3 1288 aa20.1■□□□□ 0.81
CHRFAM7A-203ENST00000401522 CEMIPQ8WUJ3 1361 aa20.1■□□□□ 0.81
CHRFAM7A-203ENST00000401522 ADAMTS7Q9UKP4 1686 aa20.1■□□□□ 0.81
CHRFAM7A-203ENST00000401522 MARCH10Q8NA82 808 aaPredicted RBP20.1■□□□□ 0.81
CHRFAM7A-203ENST00000401522 RNMTO43148 476 aaKnown RBP20.09■□□□□ 0.81
CHRFAM7A-203ENST00000401522 THUMPD2Q9BTF0 503 aaKnown RBP20.09■□□□□ 0.81
CHRFAM7A-203ENST00000401522 KDM6AO15550 1401 aaPredicted RBP20.08■□□□□ 0.81
CHRFAM7A-203ENST00000401522 CALD1Q05682 793 aaKnown RBP20.08■□□□□ 0.81
CHRFAM7A-203ENST00000401522 BECN1Q14457 450 aa20.08■□□□□ 0.81
CHRFAM7A-203ENST00000401522 UPF2Q9HAU5 1272 aaKnown RBP20.08■□□□□ 0.8
CHRFAM7A-203ENST00000401522 DDX19BQ9UMR2 479 aa20.07■□□□□ 0.8
CHRFAM7A-203ENST00000401522 SCN11AQ9UI33 1791 aa20.06■□□□□ 0.8
CHRFAM7A-203ENST00000401522 SEC24BO95487 1268 aa20.06■□□□□ 0.8
CHRFAM7A-203ENST00000401522 SSH1Q8WYL5 1049 aa20.06■□□□□ 0.8
CHRFAM7A-203ENST00000401522 TRIM27P14373 513 aa20.06■□□□□ 0.8
CHRFAM7A-203ENST00000401522 HDAC1Q13547 482 aaPredicted RBP20.06■□□□□ 0.8
CHRFAM7A-203ENST00000401522 ATF7IPQ6VMQ6 1270 aa20.06■□□□□ 0.8
CHRFAM7A-203ENST00000401522 ERVV-2B6SEH9 535 aa20.05■□□□□ 0.8
CHRFAM7A-203ENST00000401522 KIF16BQ96L93 1317 aa20.04■□□□□ 0.8
CHRFAM7A-203ENST00000401522 IPO8O15397 1037 aaKnown RBP20.03■□□□□ 0.8
CHRFAM7A-203ENST00000401522 ZNF853P0CG23 659 aa20.03■□□□□ 0.8
CHRFAM7A-203ENST00000401522 TEFQ10587 303 aa20.03■□□□□ 0.8
CHRFAM7A-203ENST00000401522 GSE1Q14687 1217 aa20.03■□□□□ 0.8
CHRFAM7A-203ENST00000401522 CFAP44Q96MT7 982 aa20.03■□□□□ 0.8
CHRFAM7A-203ENST00000401522 SLC52A2Q9HAB3 445 aa20.03■□□□□ 0.8
CHRFAM7A-203ENST00000401522 IFT57Q9NWB7 429 aa20.03■□□□□ 0.8
CHRFAM7A-203ENST00000401522 BCL9O00512 1426 aa20.02■□□□□ 0.8
CHRFAM7A-203ENST00000401522 TAF7Q15545 349 aaPredicted RBP20.02■□□□□ 0.8
CHRFAM7A-203ENST00000401522 ALDH1L2Q3SY69 923 aa20.02■□□□□ 0.8
CHRFAM7A-203ENST00000401522 KRT27Q7Z3Y8 459 aa20.02■□□□□ 0.8
CHRFAM7A-203ENST00000401522 RGS12O14924 1447 aa20.02■□□□□ 0.8
CHRFAM7A-203ENST00000401522 BRWD3Q6RI45 1802 aa20.02■□□□□ 0.8
CHRFAM7A-203ENST00000401522 GNAI1P63096 354 aa20.02■□□□□ 0.79
CHRFAM7A-203ENST00000401522 ZNF428Q96B54 188 aa20.02■□□□□ 0.79
CHRFAM7A-203ENST00000401522 TBC1D32Q96NH3 1257 aa20.02■□□□□ 0.79
CHRFAM7A-203ENST00000401522 BABAM1Q9NWV8 329 aa20.02■□□□□ 0.79
CHRFAM7A-203ENST00000401522 MRC1P22897 1456 aa20.02■□□□□ 0.79
CHRFAM7A-203ENST00000401522 CHL1O00533 1208 aa20.01■□□□□ 0.79
CHRFAM7A-203ENST00000401522 ITPRIPQ8IWB1 547 aa20.01■□□□□ 0.79
CHRFAM7A-203ENST00000401522 NFATC2IPQ8NCF5 419 aa20.01■□□□□ 0.79
CHRFAM7A-203ENST00000401522 NOB1Q9ULX3 412 aaKnown RBP20.01■□□□□ 0.79
CHRFAM7A-203ENST00000401522 CABP4P57796 275 aa20■□□□□ 0.79
CHRFAM7A-203ENST00000401522 TOGARAM1Q9Y4F4 1720 aa20■□□□□ 0.79
CHRFAM7A-203ENST00000401522 SIPA1L3O60292 1781 aaPredicted RBP19.99■□□□□ 0.79
CHRFAM7A-203ENST00000401522 BRPF1P55201 1214 aaPredicted RBP19.98■□□□□ 0.79
CHRFAM7A-203ENST00000401522 BTBD11A6QL63 1104 aa19.97■□□□□ 0.79
CHRFAM7A-203ENST00000401522 FAM182BQ5T319 152 aa19.97■□□□□ 0.79
CHRFAM7A-203ENST00000401522 SMC5Q8IY18 1101 aa19.97■□□□□ 0.79
CHRFAM7A-203ENST00000401522 TMEM57Q8N5G2 664 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms