RNA–Protein interactions for RNA: ENST00000401004.2

HIST2H3DP1-201, Transcript of histone cluster 2 H3 family member d pseudogene 1, humanhuman

BASIC

Gene HIST2H3DP1, Length 416 nt, Biotype unprocessed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3DP1-201ENST00000401004 SGIP1Q9BQI5 828 aa23.53■■□□□ 1.36
HIST2H3DP1-201ENST00000401004 COL3A1P02461 1466 aaPredicted RBP23.53■■□□□ 1.36
HIST2H3DP1-201ENST00000401004 COL23A1Q86Y22 540 aaPredicted RBP23.51■■□□□ 1.35
HIST2H3DP1-201ENST00000401004 RBM42Q9BTD8 480 aaKnown RBP23.51■■□□□ 1.35
HIST2H3DP1-201ENST00000401004 NUDCQ9Y266 331 aa23.51■■□□□ 1.35
HIST2H3DP1-201ENST00000401004 PPP2R1AP30153 589 aa23.5■■□□□ 1.35
HIST2H3DP1-201ENST00000401004 FHDC1Q9C0D6 1143 aaPredicted RBP23.5■■□□□ 1.35
HIST2H3DP1-201ENST00000401004 NFATC2IPQ8NCF5 419 aa23.49■■□□□ 1.35
HIST2H3DP1-201ENST00000401004 MTHFSDQ2M296 383 aaKnown RBP23.48■■□□□ 1.35
HIST2H3DP1-201ENST00000401004 LINC00116Q8NCU8 138 aa23.48■■□□□ 1.35
HIST2H3DP1-201ENST00000401004 PHF14O94880 888 aa23.47■■□□□ 1.35
HIST2H3DP1-201ENST00000401004 SYT17Q9BSW7 474 aa23.47■■□□□ 1.35
HIST2H3DP1-201ENST00000401004 SSFA2P28290 1259 aa23.46■■□□□ 1.35
HIST2H3DP1-201ENST00000401004 ITPK1Q13572 414 aa23.46■■□□□ 1.35
HIST2H3DP1-201ENST00000401004 KLHL34Q8N239 644 aa23.46■■□□□ 1.35
HIST2H3DP1-201ENST00000401004 SCN11AQ9UI33 1791 aa23.46■■□□□ 1.35
HIST2H3DP1-201ENST00000401004 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.45■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 GNPATO15228 680 aa23.45■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 GAS2L2Q8NHY3 880 aa23.45■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 SLC52A2Q9HAB3 445 aa23.44■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 RNMTO43148 476 aaKnown RBP23.43■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 PTCD1O75127 700 aaKnown RBP23.43■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 MSL1Q68DK7 614 aa23.43■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 LGR6Q9HBX8 967 aa23.43■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 ZNF831Q5JPB2 1677 aa23.43■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 COL24A1Q17RW2 1714 aa23.42■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 MAP3K5Q99683 1374 aa23.42■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 U2AF1L5P0DN76 240 aaPredicted RBP23.42■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 U2AF1Q01081 240 aaKnown RBP eCLIP23.42■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 UBR3Q6ZT12 1888 aa23.42■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 RTCBQ9Y3I0 505 aaKnown RBP23.41■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 PRKAR2BP31323 418 aa23.4■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 SLC4A9Q96Q91 983 aa23.4■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 MRC1P22897 1456 aa23.4■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 CNTNAP4Q9C0A0 1308 aa23.39■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 GNAT3A8MTJ3 354 aa23.39■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 AMIGO3Q86WK7 504 aa23.39■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 TRAPPC3LQ5T215 181 aa23.38■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 RC3H1Q5TC82 1133 aaKnown RBP23.38■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 RSPH6AQ9H0K4 717 aa23.38■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 SMIM5Q71RC9 77 aa23.37■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 VIRMAQ69YN4 1812 aaKnown RBP23.36■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 FCHSD2O94868 740 aa23.36■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 ADRA2BP18089 450 aa23.36■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 TEFQ10587 303 aa23.36■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 COL5A3P25940 1745 aaPredicted RBP23.36■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 ADAMTS7Q9UKP4 1686 aa23.35■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 NEFMP07197 916 aa23.35■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 DDX10Q13206 875 aaKnown RBP23.35■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 TTC5Q8N0Z6 440 aa23.34■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 RPS6KA4O75676 772 aa23.33■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 CRKLP46109 303 aaKnown RBP23.33■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 SLC39A6Q13433 755 aa23.33■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 RALBP1Q15311 655 aa23.33■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 PHACTR3Q96KR7 559 aa23.33■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 RFC4P35249 363 aa23.32■■□□□ 1.32
HIST2H3DP1-201ENST00000401004 ZEB1P37275 1124 aaPredicted RBP23.32■■□□□ 1.32
HIST2H3DP1-201ENST00000401004 CICQ96RK0 1608 aaPredicted RBP23.31■■□□□ 1.32
HIST2H3DP1-201ENST00000401004 GPR162Q16538 588 aa23.31■■□□□ 1.32
HIST2H3DP1-201ENST00000401004 IL17REQ8NFR9 667 aa23.31■■□□□ 1.32
HIST2H3DP1-201ENST00000401004 RTF1Q92541 710 aaKnown RBP23.31■■□□□ 1.32
HIST2H3DP1-201ENST00000401004 ARHGEF1Q92888 912 aaKnown RBP23.3■■□□□ 1.32
HIST2H3DP1-201ENST00000401004 TJP1Q07157 1748 aa23.3■■□□□ 1.32
HIST2H3DP1-201ENST00000401004 YY1P25490 414 aa23.29■■□□□ 1.32
HIST2H3DP1-201ENST00000401004 DNAJC10Q8IXB1 793 aa23.29■■□□□ 1.32
HIST2H3DP1-201ENST00000401004 PELP1Q8IZL8 1130 aaKnown RBP23.29■■□□□ 1.32
HIST2H3DP1-201ENST00000401004 VSIG10Q8N0Z9 540 aa23.29■■□□□ 1.32
HIST2H3DP1-201ENST00000401004 NLGN1Q8N2Q7 840 aa23.29■■□□□ 1.32
HIST2H3DP1-201ENST00000401004 CD2APQ9Y5K6 639 aa23.29■■□□□ 1.32
HIST2H3DP1-201ENST00000401004 NLGN2Q8NFZ4 835 aa23.28■■□□□ 1.32
HIST2H3DP1-201ENST00000401004 CCDC87Q9NVE4 849 aa23.28■■□□□ 1.32
HIST2H3DP1-201ENST00000401004 KCPQ6ZWJ8 1503 aa23.28■■□□□ 1.32
HIST2H3DP1-201ENST00000401004 PNNQ9H307 717 aaKnown RBP23.27■■□□□ 1.32
HIST2H3DP1-201ENST00000401004 CEMIPQ8WUJ3 1361 aa23.26■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 MMP10P09238 476 aa23.25■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 ZNF790Q6PG37 636 aa23.25■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 MYH14Q7Z406 1995 aaKnown RBP23.25■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 BTBD11A6QL63 1104 aa23.24■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 CYP19A1P11511 503 aaPredicted RBP23.24■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 INTS5Q6P9B9 1019 aaKnown RBP23.24■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 UBR2Q8IWV8 1755 aa23.24■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 HTATSF1O43719 755 aaKnown RBP23.23■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 STARD3NLO95772 234 aa23.23■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 GYS1P13807 737 aa23.22■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 MCM10Q7L590 875 aa23.22■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 FMNL2Q96PY5 1086 aa23.22■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 TEX13AQ9BXU3 409 aaPredicted RBP23.22■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 MYBBP1AQ9BQG0 1328 aaKnown RBP23.22■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 MAPK8IP3Q9UPT6 1336 aa23.22■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 C4AP0C0L4 1744 aa23.22■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 SIPA1L3O60292 1781 aaPredicted RBP23.22■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 ZPR1O75312 459 aa23.21■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 ZNF496Q96IT1 587 aaPredicted RBP23.21■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 PARP3Q9Y6F1 533 aa23.21■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 HEG1Q9ULI3 1381 aa23.2■■□□□ 1.3
HIST2H3DP1-201ENST00000401004 SOS1Q07889 1333 aaPredicted RBP23.2■■□□□ 1.3
HIST2H3DP1-201ENST00000401004 USP42Q9H9J4 1324 aaKnown RBP23.2■■□□□ 1.3
HIST2H3DP1-201ENST00000401004 GRIN3BO60391 1043 aa23.18■■□□□ 1.3
HIST2H3DP1-201ENST00000401004 SRP68Q9UHB9 627 aaKnown RBP23.18■■□□□ 1.3
HIST2H3DP1-201ENST00000401004 ZBTB1Q9Y2K1 713 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms