RNA–Protein interactions for RNA: ENST00000401004.2

HIST2H3DP1-201, Transcript of histone cluster 2 H3 family member d pseudogene 1, humanhuman

BASIC

Gene HIST2H3DP1, Length 416 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3DP1-201ENST00000401004 SGIP1Q9BQI5 828 aa23.53■■□□□ 1.36
HIST2H3DP1-201ENST00000401004 COL3A1P02461 1466 aaPredicted RBP23.53■■□□□ 1.36
HIST2H3DP1-201ENST00000401004 COL23A1Q86Y22 540 aaPredicted RBP23.51■■□□□ 1.35
HIST2H3DP1-201ENST00000401004 RBM42Q9BTD8 480 aaKnown RBP23.51■■□□□ 1.35
HIST2H3DP1-201ENST00000401004 NUDCQ9Y266 331 aa23.51■■□□□ 1.35
HIST2H3DP1-201ENST00000401004 PPP2R1AP30153 589 aa23.5■■□□□ 1.35
HIST2H3DP1-201ENST00000401004 FHDC1Q9C0D6 1143 aaPredicted RBP23.5■■□□□ 1.35
HIST2H3DP1-201ENST00000401004 NFATC2IPQ8NCF5 419 aa23.49■■□□□ 1.35
HIST2H3DP1-201ENST00000401004 MTHFSDQ2M296 383 aaKnown RBP23.48■■□□□ 1.35
HIST2H3DP1-201ENST00000401004 LINC00116Q8NCU8 138 aa23.48■■□□□ 1.35
HIST2H3DP1-201ENST00000401004 PHF14O94880 888 aa23.47■■□□□ 1.35
HIST2H3DP1-201ENST00000401004 SYT17Q9BSW7 474 aa23.47■■□□□ 1.35
HIST2H3DP1-201ENST00000401004 SSFA2P28290 1259 aa23.46■■□□□ 1.35
HIST2H3DP1-201ENST00000401004 ITPK1Q13572 414 aa23.46■■□□□ 1.35
HIST2H3DP1-201ENST00000401004 KLHL34Q8N239 644 aa23.46■■□□□ 1.35
HIST2H3DP1-201ENST00000401004 SCN11AQ9UI33 1791 aa23.46■■□□□ 1.35
HIST2H3DP1-201ENST00000401004 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.45■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 GNPATO15228 680 aa23.45■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 GAS2L2Q8NHY3 880 aa23.45■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 SLC52A2Q9HAB3 445 aa23.44■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 RNMTO43148 476 aaKnown RBP23.43■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 PTCD1O75127 700 aaKnown RBP23.43■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 MSL1Q68DK7 614 aa23.43■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 LGR6Q9HBX8 967 aa23.43■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 ZNF831Q5JPB2 1677 aa23.43■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 COL24A1Q17RW2 1714 aa23.42■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 MAP3K5Q99683 1374 aa23.42■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 U2AF1L5P0DN76 240 aaPredicted RBP23.42■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 U2AF1Q01081 240 aaKnown RBP eCLIP23.42■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 UBR3Q6ZT12 1888 aa23.42■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 RTCBQ9Y3I0 505 aaKnown RBP23.41■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 PRKAR2BP31323 418 aa23.4■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 SLC4A9Q96Q91 983 aa23.4■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 MRC1P22897 1456 aa23.4■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 CNTNAP4Q9C0A0 1308 aa23.39■■□□□ 1.34
HIST2H3DP1-201ENST00000401004 GNAT3A8MTJ3 354 aa23.39■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 AMIGO3Q86WK7 504 aa23.39■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 TRAPPC3LQ5T215 181 aa23.38■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 RC3H1Q5TC82 1133 aaKnown RBP23.38■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 RSPH6AQ9H0K4 717 aa23.38■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 SMIM5Q71RC9 77 aa23.37■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 VIRMAQ69YN4 1812 aaKnown RBP23.36■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 FCHSD2O94868 740 aa23.36■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 ADRA2BP18089 450 aa23.36■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 TEFQ10587 303 aa23.36■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 COL5A3P25940 1745 aaPredicted RBP23.36■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 ADAMTS7Q9UKP4 1686 aa23.35■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 NEFMP07197 916 aa23.35■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 DDX10Q13206 875 aaKnown RBP23.35■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 TTC5Q8N0Z6 440 aa23.34■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 RPS6KA4O75676 772 aa23.33■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 CRKLP46109 303 aaKnown RBP23.33■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 SLC39A6Q13433 755 aa23.33■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 RALBP1Q15311 655 aa23.33■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 PHACTR3Q96KR7 559 aa23.33■■□□□ 1.33
HIST2H3DP1-201ENST00000401004 RFC4P35249 363 aa23.32■■□□□ 1.32
HIST2H3DP1-201ENST00000401004 ZEB1P37275 1124 aaPredicted RBP23.32■■□□□ 1.32
HIST2H3DP1-201ENST00000401004 CICQ96RK0 1608 aaPredicted RBP23.31■■□□□ 1.32
HIST2H3DP1-201ENST00000401004 GPR162Q16538 588 aa23.31■■□□□ 1.32
HIST2H3DP1-201ENST00000401004 IL17REQ8NFR9 667 aa23.31■■□□□ 1.32
HIST2H3DP1-201ENST00000401004 RTF1Q92541 710 aaKnown RBP23.31■■□□□ 1.32
HIST2H3DP1-201ENST00000401004 ARHGEF1Q92888 912 aaKnown RBP23.3■■□□□ 1.32
HIST2H3DP1-201ENST00000401004 TJP1Q07157 1748 aa23.3■■□□□ 1.32
HIST2H3DP1-201ENST00000401004 YY1P25490 414 aa23.29■■□□□ 1.32
HIST2H3DP1-201ENST00000401004 DNAJC10Q8IXB1 793 aa23.29■■□□□ 1.32
HIST2H3DP1-201ENST00000401004 PELP1Q8IZL8 1130 aaKnown RBP23.29■■□□□ 1.32
HIST2H3DP1-201ENST00000401004 VSIG10Q8N0Z9 540 aa23.29■■□□□ 1.32
HIST2H3DP1-201ENST00000401004 NLGN1Q8N2Q7 840 aa23.29■■□□□ 1.32
HIST2H3DP1-201ENST00000401004 CD2APQ9Y5K6 639 aa23.29■■□□□ 1.32
HIST2H3DP1-201ENST00000401004 NLGN2Q8NFZ4 835 aa23.28■■□□□ 1.32
HIST2H3DP1-201ENST00000401004 CCDC87Q9NVE4 849 aa23.28■■□□□ 1.32
HIST2H3DP1-201ENST00000401004 KCPQ6ZWJ8 1503 aa23.28■■□□□ 1.32
HIST2H3DP1-201ENST00000401004 PNNQ9H307 717 aaKnown RBP23.27■■□□□ 1.32
HIST2H3DP1-201ENST00000401004 CEMIPQ8WUJ3 1361 aa23.26■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 MMP10P09238 476 aa23.25■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 ZNF790Q6PG37 636 aa23.25■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 MYH14Q7Z406 1995 aaKnown RBP23.25■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 BTBD11A6QL63 1104 aa23.24■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 CYP19A1P11511 503 aaPredicted RBP23.24■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 INTS5Q6P9B9 1019 aaKnown RBP23.24■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 UBR2Q8IWV8 1755 aa23.24■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 HTATSF1O43719 755 aaKnown RBP23.23■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 STARD3NLO95772 234 aa23.23■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 GYS1P13807 737 aa23.22■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 MCM10Q7L590 875 aa23.22■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 FMNL2Q96PY5 1086 aa23.22■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 TEX13AQ9BXU3 409 aaPredicted RBP23.22■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 MYBBP1AQ9BQG0 1328 aaKnown RBP23.22■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 MAPK8IP3Q9UPT6 1336 aa23.22■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 C4AP0C0L4 1744 aa23.22■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 SIPA1L3O60292 1781 aaPredicted RBP23.22■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 ZPR1O75312 459 aa23.21■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 ZNF496Q96IT1 587 aaPredicted RBP23.21■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 PARP3Q9Y6F1 533 aa23.21■■□□□ 1.31
HIST2H3DP1-201ENST00000401004 HEG1Q9ULI3 1381 aa23.2■■□□□ 1.3
HIST2H3DP1-201ENST00000401004 SOS1Q07889 1333 aaPredicted RBP23.2■■□□□ 1.3
HIST2H3DP1-201ENST00000401004 USP42Q9H9J4 1324 aaKnown RBP23.2■■□□□ 1.3
HIST2H3DP1-201ENST00000401004 GRIN3BO60391 1043 aa23.18■■□□□ 1.3
HIST2H3DP1-201ENST00000401004 SRP68Q9UHB9 627 aaKnown RBP23.18■■□□□ 1.3
HIST2H3DP1-201ENST00000401004 ZBTB1Q9Y2K1 713 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms