RNA–Protein interactions for RNA: ENST00000400946.2

LINC01139-201, Transcript of long intergenic non-protein coding RNA 1139, humanhuman

TSL 1 (best) BASIC

Gene LINC01139, Length 1,537 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01139-201ENST00000400946 FAM43AQ8N2R8 423 aa10.85□□□□□ -0.67
LINC01139-201ENST00000400946 GBP4Q96PP9 640 aa10.85□□□□□ -0.67
LINC01139-201ENST00000400946 THUMPD2Q9BTF0 503 aaKnown RBP10.85□□□□□ -0.67
LINC01139-201ENST00000400946 FSD2A1L4K1 749 aa10.84□□□□□ -0.67
LINC01139-201ENST00000400946 RRS1Q15050 365 aaKnown RBP10.84□□□□□ -0.67
LINC01139-201ENST00000400946 SULT6B1Q6IMI4 303 aa10.84□□□□□ -0.67
LINC01139-201ENST00000400946 GAS2L2Q8NHY3 880 aa10.84□□□□□ -0.67
LINC01139-201ENST00000400946 CHMP4AQ9BY43 222 aa10.84□□□□□ -0.67
LINC01139-201ENST00000400946 ZRANB1Q9UGI0 708 aa10.84□□□□□ -0.67
LINC01139-201ENST00000400946 LRRC37A3O60309 1634 aa10.84□□□□□ -0.67
LINC01139-201ENST00000400946 N4BP2Q86UW6 1770 aaPredicted RBP10.84□□□□□ -0.67
LINC01139-201ENST00000400946 FBLN1P23142 703 aa10.84□□□□□ -0.67
LINC01139-201ENST00000400946 CCT4P50991 539 aaKnown RBP10.84□□□□□ -0.67
LINC01139-201ENST00000400946 RABEP1Q15276 862 aa10.84□□□□□ -0.67
LINC01139-201ENST00000400946 TBC1D9Q6ZT07 1266 aa10.84□□□□□ -0.67
LINC01139-201ENST00000400946 XRN1Q8IZH2 1706 aaKnown RBP10.83□□□□□ -0.68
LINC01139-201ENST00000400946 K7ELQ4 463 aaPredicted RBP10.83□□□□□ -0.68
LINC01139-201ENST00000400946 TTC22Q5TAA0 569 aa10.83□□□□□ -0.68
LINC01139-201ENST00000400946 CASC1Q6TDU7 716 aa10.83□□□□□ -0.68
LINC01139-201ENST00000400946 PLEKHM2Q8IWE5 1019 aa10.83□□□□□ -0.68
LINC01139-201ENST00000400946 KIF2CQ99661 725 aa10.83□□□□□ -0.68
LINC01139-201ENST00000400946 OSBPL3Q9H4L5 887 aa10.83□□□□□ -0.68
LINC01139-201ENST00000400946 STRCP1A6NGW2 1772 aa10.82□□□□□ -0.68
LINC01139-201ENST00000400946 IGSF1Q8N6C5 1336 aa10.82□□□□□ -0.68
LINC01139-201ENST00000400946 EPB41L2O43491 1005 aaKnown RBP10.82□□□□□ -0.68
LINC01139-201ENST00000400946 TRAK2O60296 914 aa10.82□□□□□ -0.68
LINC01139-201ENST00000400946 PLEKHG5O94827 1062 aa10.82□□□□□ -0.68
LINC01139-201ENST00000400946 HSP90AB1P08238 724 aaKnown RBP10.82□□□□□ -0.68
LINC01139-201ENST00000400946 RAB3GAP1Q15042 981 aa10.82□□□□□ -0.68
LINC01139-201ENST00000400946 PXDNLA1KZ92 1463 aa10.81□□□□□ -0.68
LINC01139-201ENST00000400946 GOLGA6L3A6NEY3 463 aa10.81□□□□□ -0.68
LINC01139-201ENST00000400946 CEP85Q6P2H3 762 aa10.81□□□□□ -0.68
LINC01139-201ENST00000400946 RTF1Q92541 710 aaKnown RBP10.81□□□□□ -0.68
LINC01139-201ENST00000400946 FAM83GA6ND36 823 aa10.8□□□□□ -0.68
LINC01139-201ENST00000400946 ELL2O00472 640 aaPredicted RBP10.8□□□□□ -0.68
LINC01139-201ENST00000400946 MRE11P49959 708 aa10.8□□□□□ -0.68
LINC01139-201ENST00000400946 SLC26A8Q96RN1 970 aa10.8□□□□□ -0.68
LINC01139-201ENST00000400946 REC8O95072 547 aa10.79□□□□□ -0.68
LINC01139-201ENST00000400946 AEBP1Q8IUX7 1158 aa10.79□□□□□ -0.68
LINC01139-201ENST00000400946 CWC22Q9HCG8 908 aaKnown RBP10.79□□□□□ -0.68
LINC01139-201ENST00000400946 BRPF3Q9ULD4 1205 aa10.79□□□□□ -0.68
LINC01139-201ENST00000400946 PIK3C2AO00443 1686 aa10.79□□□□□ -0.68
LINC01139-201ENST00000400946 IBTKQ9P2D0 1353 aaPredicted RBP10.79□□□□□ -0.68
LINC01139-201ENST00000400946 MAP3K19Q56UN5 1328 aa10.79□□□□□ -0.68
LINC01139-201ENST00000400946 GOLGA6L22H0YM25 854 aa10.79□□□□□ -0.68
LINC01139-201ENST00000400946 GNAI3P08754 354 aa10.79□□□□□ -0.68
LINC01139-201ENST00000400946 NUCB2P80303 420 aa10.79□□□□□ -0.68
LINC01139-201ENST00000400946 HSP90AB2PQ58FF8 381 aa10.79□□□□□ -0.68
LINC01139-201ENST00000400946 C1orf115Q9H7X2 142 aa10.79□□□□□ -0.68
LINC01139-201ENST00000400946 GSPT1P15170 499 aaKnown RBP10.78□□□□□ -0.68
LINC01139-201ENST00000400946 KCNA6P17658 529 aa10.78□□□□□ -0.68
LINC01139-201ENST00000400946 DCTN1Q14203 1278 aa10.78□□□□□ -0.68
LINC01139-201ENST00000400946 CCDC30Q5VVM6 783 aa10.78□□□□□ -0.68
LINC01139-201ENST00000400946 STK31Q9BXU1 1019 aa10.78□□□□□ -0.68
LINC01139-201ENST00000400946 USP26Q9BXU7 913 aa10.78□□□□□ -0.68
LINC01139-201ENST00000400946 AMOTL2Q9Y2J4 779 aa10.78□□□□□ -0.68
LINC01139-201ENST00000400946 FAM208AQ9UK61 1670 aaKnown RBP10.77□□□□□ -0.68
LINC01139-201ENST00000400946 UBAP1LF5GYI3 381 aa10.77□□□□□ -0.69
LINC01139-201ENST00000400946 HSP90AA1P07900 732 aaKnown RBP10.77□□□□□ -0.69
LINC01139-201ENST00000400946 MCM2P49736 904 aa10.77□□□□□ -0.69
LINC01139-201ENST00000400946 TNPO1Q92973 898 aaKnown RBP10.77□□□□□ -0.69
LINC01139-201ENST00000400946 IL17RAQ96F46 866 aa10.77□□□□□ -0.69
LINC01139-201ENST00000400946 SRCIN1Q9C0H9 1055 aa10.77□□□□□ -0.69
LINC01139-201ENST00000400946 MSH6P52701 1360 aa10.77□□□□□ -0.69
LINC01139-201ENST00000400946 PHRF1Q9P1Y6 1649 aaKnown RBP10.76□□□□□ -0.69
LINC01139-201ENST00000400946 AOX1Q06278 1338 aa10.76□□□□□ -0.69
LINC01139-201ENST00000400946 GNAI2P04899 355 aa10.76□□□□□ -0.69
LINC01139-201ENST00000400946 MTHFSDQ2M296 383 aaKnown RBP10.76□□□□□ -0.69
LINC01139-201ENST00000400946 TSPYL4Q9UJ04 414 aa10.76□□□□□ -0.69
LINC01139-201ENST00000400946 MARF1Q9Y4F3 1742 aaKnown RBP10.76□□□□□ -0.69
LINC01139-201ENST00000400946 ADGRL3Q9HAR2 1447 aa10.76□□□□□ -0.69
LINC01139-201ENST00000400946 GNAT3A8MTJ3 354 aa10.75□□□□□ -0.69
LINC01139-201ENST00000400946 ST18O60284 1047 aa10.75□□□□□ -0.69
LINC01139-201ENST00000400946 HOXB7P09629 217 aa10.75□□□□□ -0.69
LINC01139-201ENST00000400946 AMPHP49418 695 aa10.75□□□□□ -0.69
LINC01139-201ENST00000400946 MCM10Q7L590 875 aa10.75□□□□□ -0.69
LINC01139-201ENST00000400946 NGDNQ8NEJ9 315 aaKnown RBP10.75□□□□□ -0.69
LINC01139-201ENST00000400946 NWD1Q149M9 1564 aa10.75□□□□□ -0.69
LINC01139-201ENST00000400946 CHD2O14647 1828 aaKnown RBP10.75□□□□□ -0.69
LINC01139-201ENST00000400946 TUBGCP6Q96RT7 1819 aa10.75□□□□□ -0.69
LINC01139-201ENST00000400946 RGPD8O14715 1765 aaPredicted RBP10.74□□□□□ -0.69
LINC01139-201ENST00000400946 ERC2O15083 957 aa10.74□□□□□ -0.69
LINC01139-201ENST00000400946 TOM1O60784 492 aa10.74□□□□□ -0.69
LINC01139-201ENST00000400946 XRCC6P12956 609 aaKnown RBP eCLIP10.74□□□□□ -0.69
LINC01139-201ENST00000400946 SDSP20132 328 aa10.74□□□□□ -0.69
LINC01139-201ENST00000400946 ANAPC15P60006 121 aa10.74□□□□□ -0.69
LINC01139-201ENST00000400946 ZNF579Q8NAF0 562 aaKnown RBP10.74□□□□□ -0.69
LINC01139-201ENST00000400946 EYA1Q99502 592 aa10.74□□□□□ -0.69
LINC01139-201ENST00000400946 MEIS3Q99687 375 aa10.74□□□□□ -0.69
LINC01139-201ENST00000400946 XIRP1Q702N8 1843 aaKnown RBP10.74□□□□□ -0.69
LINC01139-201ENST00000400946 MAP3K5Q99683 1374 aa10.74□□□□□ -0.69
LINC01139-201ENST00000400946 STAP2Q9UGK3 403 aa10.74□□□□□ -0.69
LINC01139-201ENST00000400946 MED1Q15648 1581 aaPredicted RBP10.73□□□□□ -0.69
LINC01139-201ENST00000400946 PDE1AP54750 535 aa10.73□□□□□ -0.69
LINC01139-201ENST00000400946 ATP8B2P98198 1209 aa10.73□□□□□ -0.69
LINC01139-201ENST00000400946 TAF7Q15545 349 aaPredicted RBP10.73□□□□□ -0.69
LINC01139-201ENST00000400946 SALL3Q9BXA9 1300 aa10.72□□□□□ -0.69
LINC01139-201ENST00000400946 OVOS2A0A0G2JMS6 1433 aa10.72□□□□□ -0.69
LINC01139-201ENST00000400946 RAB11FIP3O75154 756 aa10.72□□□□□ -0.69
LINC01139-201ENST00000400946 CYP2E1P05181 493 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms