RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 TRIM50Q86XT4 487 aa10.01□□□□□ -0.81
CSNK2A1-204ENST00000400227 KIFC2Q96AC6 838 aa10.01□□□□□ -0.81
CSNK2A1-204ENST00000400227 TRIM47Q96LD4 638 aa10.01□□□□□ -0.81
CSNK2A1-204ENST00000400227 ARHGEF10LQ9HCE6 1279 aa10.01□□□□□ -0.81
CSNK2A1-204ENST00000400227 POTECB2RU33 542 aa9.99□□□□□ -0.81
CSNK2A1-204ENST00000400227 KANK4Q5T7N3 995 aaPredicted RBP9.99□□□□□ -0.81
CSNK2A1-204ENST00000400227 INSM2Q96T92 566 aaPredicted RBP9.99□□□□□ -0.81
CSNK2A1-204ENST00000400227 CUX2O14529 1486 aa9.99□□□□□ -0.81
CSNK2A1-204ENST00000400227 ARHGAP35Q9NRY4 1499 aa9.99□□□□□ -0.81
CSNK2A1-204ENST00000400227 SOS2Q07890 1332 aaPredicted RBP9.99□□□□□ -0.81
CSNK2A1-204ENST00000400227 RANGAP1P46060 587 aaPredicted RBP9.98□□□□□ -0.81
CSNK2A1-204ENST00000400227 ATP1A2P50993 1020 aa9.98□□□□□ -0.81
CSNK2A1-204ENST00000400227 CLN3Q13286 438 aa9.98□□□□□ -0.81
CSNK2A1-204ENST00000400227 RAB6BQ9NRW1 208 aa9.98□□□□□ -0.81
CSNK2A1-204ENST00000400227 IGF1RP08069 1367 aa9.98□□□□□ -0.81
CSNK2A1-204ENST00000400227 RFX1P22670 979 aa9.98□□□□□ -0.81
CSNK2A1-204ENST00000400227 CTSOP43234 321 aaPredicted RBP9.98□□□□□ -0.81
CSNK2A1-204ENST00000400227 SCNN1DP51172 638 aa9.98□□□□□ -0.81
CSNK2A1-204ENST00000400227 CLDN10P78369 228 aa9.98□□□□□ -0.81
CSNK2A1-204ENST00000400227 ESCO1Q5FWF5 840 aa9.98□□□□□ -0.81
CSNK2A1-204ENST00000400227 DIEXFQ68CQ4 756 aaKnown RBP9.98□□□□□ -0.81
CSNK2A1-204ENST00000400227 VRTNQ9H8Y1 702 aa9.98□□□□□ -0.81
CSNK2A1-204ENST00000400227 ETNK1Q9HBU6 452 aa9.98□□□□□ -0.81
CSNK2A1-204ENST00000400227 POLMQ9NP87 494 aaPredicted RBP9.98□□□□□ -0.81
CSNK2A1-204ENST00000400227 FGD5Q6ZNL6 1462 aa9.98□□□□□ -0.81
CSNK2A1-204ENST00000400227 TTLL8A6PVC2 850 aa9.97□□□□□ -0.81
CSNK2A1-204ENST00000400227 C11orf95C9JLR9 678 aaPredicted RBP9.97□□□□□ -0.81
CSNK2A1-204ENST00000400227 MEN1O00255 615 aa9.97□□□□□ -0.81
CSNK2A1-204ENST00000400227 STAU1O95793 577 aaKnown RBP9.97□□□□□ -0.81
CSNK2A1-204ENST00000400227 IL2RAP01589 272 aa9.97□□□□□ -0.81
CSNK2A1-204ENST00000400227 OGFOD1Q8N543 542 aa9.97□□□□□ -0.81
CSNK2A1-204ENST00000400227 XAGE2Q96GT9 111 aa9.97□□□□□ -0.81
CSNK2A1-204ENST00000400227 WASLO00401 505 aaPredicted RBP9.96□□□□□ -0.82
CSNK2A1-204ENST00000400227 ZBTB7BO15156 539 aaPredicted RBP9.96□□□□□ -0.82
CSNK2A1-204ENST00000400227 GDF10P55107 478 aa9.96□□□□□ -0.82
CSNK2A1-204ENST00000400227 PSME1Q06323 249 aa9.96□□□□□ -0.82
CSNK2A1-204ENST00000400227 LARGE2Q8N3Y3 721 aa9.96□□□□□ -0.82
CSNK2A1-204ENST00000400227 CNKSR1Q969H4 720 aa9.96□□□□□ -0.82
CSNK2A1-204ENST00000400227 NLRP3Q96P20 1036 aa9.96□□□□□ -0.82
CSNK2A1-204ENST00000400227 ESYT1Q9BSJ8 1104 aa9.96□□□□□ -0.82
CSNK2A1-204ENST00000400227 DNAAF2Q9NVR5 837 aaKnown RBP9.96□□□□□ -0.82
CSNK2A1-204ENST00000400227 RRBP1Q9P2E9 1410 aaKnown RBP9.95□□□□□ -0.82
CSNK2A1-204ENST00000400227 INHAP05111 366 aa9.95□□□□□ -0.82
CSNK2A1-204ENST00000400227 SNRPBP14678 240 aaKnown RBP9.95□□□□□ -0.82
CSNK2A1-204ENST00000400227 RASA1P20936 1047 aa9.95□□□□□ -0.82
CSNK2A1-204ENST00000400227 GPC1P35052 558 aa9.95□□□□□ -0.82
CSNK2A1-204ENST00000400227 RNF144AP50876 292 aaPredicted RBP9.95□□□□□ -0.82
CSNK2A1-204ENST00000400227 FOXD4L5Q5VV16 416 aaPredicted RBP9.95□□□□□ -0.82
CSNK2A1-204ENST00000400227 KIAA1024Q9UPX6 916 aa9.95□□□□□ -0.82
CSNK2A1-204ENST00000400227 HRH3Q9Y5N1 445 aa9.95□□□□□ -0.82
CSNK2A1-204ENST00000400227 TMEM229AB2RXF0 380 aa9.94□□□□□ -0.82
CSNK2A1-204ENST00000400227 SRPK2P78362 688 aaKnown RBP9.94□□□□□ -0.82
CSNK2A1-204ENST00000400227 ZNF787Q6DD87 383 aa9.94□□□□□ -0.82
CSNK2A1-204ENST00000400227 RNF217Q8TC41 542 aa9.94□□□□□ -0.82
CSNK2A1-204ENST00000400227 DNMBPQ6XZF7 1577 aa9.94□□□□□ -0.82
CSNK2A1-204ENST00000400227 FAM196BA6NMK8 535 aa9.93□□□□□ -0.82
CSNK2A1-204ENST00000400227 LARP1Q6PKG0 1096 aaKnown RBP9.93□□□□□ -0.82
CSNK2A1-204ENST00000400227 SIX5Q8N196 739 aa9.93□□□□□ -0.82
CSNK2A1-204ENST00000400227 DNMT3LQ9UJW3 386 aa9.93□□□□□ -0.82
CSNK2A1-204ENST00000400227 FANCD2Q9BXW9 1451 aa9.93□□□□□ -0.82
CSNK2A1-204ENST00000400227 MAP3K1Q13233 1512 aa9.93□□□□□ -0.82
CSNK2A1-204ENST00000400227 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.92□□□□□ -0.82
CSNK2A1-204ENST00000400227 MAN1A2O60476 641 aa9.92□□□□□ -0.82
CSNK2A1-204ENST00000400227 PTK7Q13308 1070 aa9.92□□□□□ -0.82
CSNK2A1-204ENST00000400227 CRTC2Q53ET0 693 aaPredicted RBP9.92□□□□□ -0.82
CSNK2A1-204ENST00000400227 CCDC102BQ68D86 513 aa9.92□□□□□ -0.82
CSNK2A1-204ENST00000400227 TPCN2Q8NHX9 752 aa9.92□□□□□ -0.82
CSNK2A1-204ENST00000400227 ZNF594Q96JF6 807 aaPredicted RBP9.92□□□□□ -0.82
CSNK2A1-204ENST00000400227 CARMIL1Q5VZK9 1371 aa9.92□□□□□ -0.82
CSNK2A1-204ENST00000400227 USP17L15C9J2P7 530 aa9.91□□□□□ -0.82
CSNK2A1-204ENST00000400227 USP17L10C9JJH3 530 aa9.91□□□□□ -0.82
CSNK2A1-204ENST00000400227 USP17L13C9JLJ4 530 aa9.91□□□□□ -0.82
CSNK2A1-204ENST00000400227 USP17L12C9JPN9 530 aa9.91□□□□□ -0.82
CSNK2A1-204ENST00000400227 USP17L11C9JVI0 530 aa9.91□□□□□ -0.82
CSNK2A1-204ENST00000400227 USP17L21D6R901 530 aa9.91□□□□□ -0.82
CSNK2A1-204ENST00000400227 USP17L18D6R9N7 530 aa9.91□□□□□ -0.82
CSNK2A1-204ENST00000400227 USP17L22D6RA61 530 aa9.91□□□□□ -0.82
CSNK2A1-204ENST00000400227 USP17L17D6RBQ6 530 aa9.91□□□□□ -0.82
CSNK2A1-204ENST00000400227 USP17L19D6RCP7 530 aa9.91□□□□□ -0.82
CSNK2A1-204ENST00000400227 USP17L20D6RJB6 530 aa9.91□□□□□ -0.82
CSNK2A1-204ENST00000400227 DKK1O94907 266 aa9.91□□□□□ -0.82
CSNK2A1-204ENST00000400227 CENPCQ03188 943 aa9.91□□□□□ -0.82
CSNK2A1-204ENST00000400227 USP17L24Q0WX57 530 aa9.91□□□□□ -0.82
CSNK2A1-204ENST00000400227 PBXIP1Q96AQ6 731 aa9.91□□□□□ -0.82
CSNK2A1-204ENST00000400227 GRIP2Q9C0E4 1043 aa9.91□□□□□ -0.82
CSNK2A1-204ENST00000400227 FIGNL2A6NMB9 653 aa9.91□□□□□ -0.82
CSNK2A1-204ENST00000400227 SOBPA7XYQ1 873 aa9.91□□□□□ -0.82
CSNK2A1-204ENST00000400227 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.91□□□□□ -0.82
CSNK2A1-204ENST00000400227 CDCA8Q53HL2 280 aa9.91□□□□□ -0.82
CSNK2A1-204ENST00000400227 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.91□□□□□ -0.82
CSNK2A1-204ENST00000400227 SLC4A9Q96Q91 983 aa9.91□□□□□ -0.82
CSNK2A1-204ENST00000400227 FHDC1Q9C0D6 1143 aaPredicted RBP9.91□□□□□ -0.82
CSNK2A1-204ENST00000400227 ZNF358Q9NW07 568 aa9.91□□□□□ -0.82
CSNK2A1-204ENST00000400227 TIAM1Q13009 1591 aa9.9□□□□□ -0.82
CSNK2A1-204ENST00000400227 CLSPNQ9HAW4 1339 aa9.9□□□□□ -0.82
CSNK2A1-204ENST00000400227 SLC27A3Q5K4L6 730 aa9.9□□□□□ -0.83
CSNK2A1-204ENST00000400227 SERTAD1Q9UHV2 236 aa9.9□□□□□ -0.83
CSNK2A1-204ENST00000400227 ABCA10Q8WWZ4 1543 aa9.89□□□□□ -0.83
CSNK2A1-204ENST00000400227 TOPBP1Q92547 1522 aa9.89□□□□□ -0.83
CSNK2A1-204ENST00000400227 DHX57Q6P158 1386 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms