RNA–Protein interactions for RNA: ENST00000400100.5

SNRPN-205, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPN, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-205ENST00000400100 SIK1P57059 783 aa17.43■□□□□ 0.38
SNRPN-205ENST00000400100 RALBP1Q15311 655 aa17.43■□□□□ 0.38
SNRPN-205ENST00000400100 PHACTR3Q96KR7 559 aa17.43■□□□□ 0.38
SNRPN-205ENST00000400100 RSPH6AQ9H0K4 717 aa17.43■□□□□ 0.38
SNRPN-205ENST00000400100 ATP6V1AP38606 617 aa17.43■□□□□ 0.38
SNRPN-205ENST00000400100 C5P01031 1676 aa17.43■□□□□ 0.38
SNRPN-205ENST00000400100 CASZ1Q86V15 1759 aa17.42■□□□□ 0.38
SNRPN-205ENST00000400100 PPP1R1BQ9UD71 204 aaPredicted RBP17.42■□□□□ 0.38
SNRPN-205ENST00000400100 SCN11AQ9UI33 1791 aa17.41■□□□□ 0.38
SNRPN-205ENST00000400100 RNMTO43148 476 aaKnown RBP17.41■□□□□ 0.38
SNRPN-205ENST00000400100 PTCD1O75127 700 aaKnown RBP17.41■□□□□ 0.38
SNRPN-205ENST00000400100 PNPLA7Q6ZV29 1317 aa17.4■□□□□ 0.38
SNRPN-205ENST00000400100 VIRMAQ69YN4 1812 aaKnown RBP17.4■□□□□ 0.38
SNRPN-205ENST00000400100 TAF1LQ8IZX4 1826 aa17.4■□□□□ 0.38
SNRPN-205ENST00000400100 GAS2L2Q8NHY3 880 aa17.4■□□□□ 0.38
SNRPN-205ENST00000400100 SLC52A2Q9HAB3 445 aa17.4■□□□□ 0.38
SNRPN-205ENST00000400100 TUBGCP6Q96RT7 1819 aa17.39■□□□□ 0.37
SNRPN-205ENST00000400100 GNAT3A8MTJ3 354 aa17.39■□□□□ 0.37
SNRPN-205ENST00000400100 FCHSD2O94868 740 aa17.39■□□□□ 0.37
SNRPN-205ENST00000400100 ITPK1Q13572 414 aa17.39■□□□□ 0.37
SNRPN-205ENST00000400100 SMIM5Q71RC9 77 aa17.39■□□□□ 0.37
SNRPN-205ENST00000400100 LINC00116Q8NCU8 138 aa17.39■□□□□ 0.37
SNRPN-205ENST00000400100 AK7Q96M32 723 aa17.39■□□□□ 0.37
SNRPN-205ENST00000400100 MAP3K5Q99683 1374 aa17.38■□□□□ 0.37
SNRPN-205ENST00000400100 MYBBP1AQ9BQG0 1328 aaKnown RBP17.38■□□□□ 0.37
SNRPN-205ENST00000400100 PHF14O94880 888 aa17.38■□□□□ 0.37
SNRPN-205ENST00000400100 MTFR1LQ9H019 292 aa17.38■□□□□ 0.37
SNRPN-205ENST00000400100 C4BP0C0L5 1744 aa17.37■□□□□ 0.37
SNRPN-205ENST00000400100 SLC39A6Q13433 755 aa17.37■□□□□ 0.37
SNRPN-205ENST00000400100 SLC4A9Q96Q91 983 aa17.37■□□□□ 0.37
SNRPN-205ENST00000400100 COL23A1Q86Y22 540 aaPredicted RBP17.36■□□□□ 0.37
SNRPN-205ENST00000400100 ANP32CO43423 234 aa17.35■□□□□ 0.37
SNRPN-205ENST00000400100 NEFMP07197 916 aa17.35■□□□□ 0.37
SNRPN-205ENST00000400100 TEFQ10587 303 aa17.35■□□□□ 0.37
SNRPN-205ENST00000400100 AMIGO3Q86WK7 504 aa17.35■□□□□ 0.37
SNRPN-205ENST00000400100 IL17REQ8NFR9 667 aa17.35■□□□□ 0.37
SNRPN-205ENST00000400100 CCER2I3L3R5 266 aa17.35■□□□□ 0.37
SNRPN-205ENST00000400100 GNPATO15228 680 aa17.35■□□□□ 0.37
SNRPN-205ENST00000400100 PTGER2P43116 358 aa17.35■□□□□ 0.37
SNRPN-205ENST00000400100 PRKRIP1Q9H875 184 aaPredicted RBP17.35■□□□□ 0.37
SNRPN-205ENST00000400100 MSL1Q68DK7 614 aa17.34■□□□□ 0.37
SNRPN-205ENST00000400100 HMGB2P26583 209 aaKnown RBP17.33■□□□□ 0.37
SNRPN-205ENST00000400100 MCM10Q7L590 875 aa17.33■□□□□ 0.37
SNRPN-205ENST00000400100 RTF1Q92541 710 aaKnown RBP17.33■□□□□ 0.37
SNRPN-205ENST00000400100 QSER1Q2KHR3 1735 aa17.33■□□□□ 0.36
SNRPN-205ENST00000400100 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.33■□□□□ 0.36
SNRPN-205ENST00000400100 DCTN1Q14203 1278 aa17.33■□□□□ 0.36
SNRPN-205ENST00000400100 MRC1P22897 1456 aa17.32■□□□□ 0.36
SNRPN-205ENST00000400100 KLHL34Q8N239 644 aa17.31■□□□□ 0.36
SNRPN-205ENST00000400100 SLC16A10Q8TF71 515 aa17.31■□□□□ 0.36
SNRPN-205ENST00000400100 ADAMTS7Q9UKP4 1686 aa17.31■□□□□ 0.36
SNRPN-205ENST00000400100 MAPK8IP3Q9UPT6 1336 aa17.31■□□□□ 0.36
SNRPN-205ENST00000400100 TTC5Q8N0Z6 440 aa17.3■□□□□ 0.36
SNRPN-205ENST00000400100 UBR3Q6ZT12 1888 aa17.3■□□□□ 0.36
SNRPN-205ENST00000400100 FLAD1Q8NFF5 587 aa17.3■□□□□ 0.36
SNRPN-205ENST00000400100 PLEKHF1Q96S99 279 aa17.3■□□□□ 0.36
SNRPN-205ENST00000400100 POLD1P28340 1107 aa17.29■□□□□ 0.36
SNRPN-205ENST00000400100 WDR43Q15061 677 aaKnown RBP eCLIP17.29■□□□□ 0.36
SNRPN-205ENST00000400100 CCDC146Q8IYE0 955 aa17.29■□□□□ 0.36
SNRPN-205ENST00000400100 ARXQ96QS3 562 aa17.29■□□□□ 0.36
SNRPN-205ENST00000400100 SGIP1Q9BQI5 828 aa17.29■□□□□ 0.36
SNRPN-205ENST00000400100 BTBD11A6QL63 1104 aa17.28■□□□□ 0.36
SNRPN-205ENST00000400100 CRKLP46109 303 aaKnown RBP17.28■□□□□ 0.36
SNRPN-205ENST00000400100 DNAJC10Q8IXB1 793 aa17.28■□□□□ 0.36
SNRPN-205ENST00000400100 PNNQ9H307 717 aaKnown RBP17.28■□□□□ 0.36
SNRPN-205ENST00000400100 RTCBQ9Y3I0 505 aaKnown RBP17.28■□□□□ 0.36
SNRPN-205ENST00000400100 COL5A3P25940 1745 aaPredicted RBP17.28■□□□□ 0.36
SNRPN-205ENST00000400100 SSFA2P28290 1259 aa17.28■□□□□ 0.36
SNRPN-205ENST00000400100 FHDC1Q9C0D6 1143 aaPredicted RBP17.28■□□□□ 0.36
SNRPN-205ENST00000400100 CEMIPQ8WUJ3 1361 aa17.27■□□□□ 0.36
SNRPN-205ENST00000400100 ZNF790Q6PG37 636 aa17.27■□□□□ 0.35
SNRPN-205ENST00000400100 TJP1Q07157 1748 aa17.27■□□□□ 0.35
SNRPN-205ENST00000400100 ZNF831Q5JPB2 1677 aa17.26■□□□□ 0.35
SNRPN-205ENST00000400100 TRAPPC3LQ5T215 181 aa17.26■□□□□ 0.35
SNRPN-205ENST00000400100 DLG5Q8TDM6 1919 aa17.26■□□□□ 0.35
SNRPN-205ENST00000400100 KCPQ6ZWJ8 1503 aa17.26■□□□□ 0.35
SNRPN-205ENST00000400100 SIPA1L3O60292 1781 aaPredicted RBP17.25■□□□□ 0.35
SNRPN-205ENST00000400100 KCNQ3O43525 872 aa17.25■□□□□ 0.35
SNRPN-205ENST00000400100 NFE2L2Q16236 605 aa17.25■□□□□ 0.35
SNRPN-205ENST00000400100 ZNF496Q96IT1 587 aaPredicted RBP17.25■□□□□ 0.35
SNRPN-205ENST00000400100 THUMPD2Q9BTF0 503 aaKnown RBP17.25■□□□□ 0.35
SNRPN-205ENST00000400100 CNTNAP4Q9C0A0 1308 aa17.25■□□□□ 0.35
SNRPN-205ENST00000400100 GOLGB1Q14789 3259 aaKnown RBP17.25■□□□□ 0.35
SNRPN-205ENST00000400100 MYH14Q7Z406 1995 aaKnown RBP17.25■□□□□ 0.35
SNRPN-205ENST00000400100 NEUROD2Q15784 382 aa17.25■□□□□ 0.35
SNRPN-205ENST00000400100 RC3H1Q5TC82 1133 aaKnown RBP17.25■□□□□ 0.35
SNRPN-205ENST00000400100 MIS18AQ9NYP9 233 aa17.25■□□□□ 0.35
SNRPN-205ENST00000400100 RPS6KA4O75676 772 aa17.24■□□□□ 0.35
SNRPN-205ENST00000400100 ARHGEF1Q92888 912 aaKnown RBP17.24■□□□□ 0.35
SNRPN-205ENST00000400100 ADAMTS8Q9UP79 889 aa17.24■□□□□ 0.35
SNRPN-205ENST00000400100 RRP7AQ9Y3A4 280 aaKnown RBP17.24■□□□□ 0.35
SNRPN-205ENST00000400100 UTRNP46939 3433 aa17.24■□□□□ 0.35
SNRPN-205ENST00000400100 HTATSF1O43719 755 aaKnown RBP17.23■□□□□ 0.35
SNRPN-205ENST00000400100 RFC4P35249 363 aa17.23■□□□□ 0.35
SNRPN-205ENST00000400100 CYP19A1P11511 503 aaPredicted RBP17.23■□□□□ 0.35
SNRPN-205ENST00000400100 RIPK4P57078 832 aa17.23■□□□□ 0.35
SNRPN-205ENST00000400100 INTS5Q6P9B9 1019 aaKnown RBP17.23■□□□□ 0.35
SNRPN-205ENST00000400100 SYT17Q9BSW7 474 aa17.23■□□□□ 0.35
SNRPN-205ENST00000400100 CCDC87Q9NVE4 849 aa17.23■□□□□ 0.35
SNRPN-205ENST00000400100 UBR2Q8IWV8 1755 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms