RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 ANKRD1Q15327 319 aa16.11■□□□□ 0.17
VAPA-202ENST00000400000 CHRNA2Q15822 529 aa16.11■□□□□ 0.17
VAPA-202ENST00000400000 CAVIN4Q5BKX8 364 aa16.11■□□□□ 0.17
VAPA-202ENST00000400000 TRMT112Q9UI30 125 aaKnown RBP16.11■□□□□ 0.17
VAPA-202ENST00000400000 UPF3BQ9BZI7 483 aaKnown RBP16.11■□□□□ 0.17
VAPA-202ENST00000400000 BCCIPQ9P287 314 aaKnown RBP eCLIP16.11■□□□□ 0.17
VAPA-202ENST00000400000 DACH1Q9UI36 760 aa16.11■□□□□ 0.17
VAPA-202ENST00000400000 CFAP100Q494V2 611 aa16.11■□□□□ 0.17
VAPA-202ENST00000400000 ATF7IPQ6VMQ6 1270 aa16.11■□□□□ 0.17
VAPA-202ENST00000400000 PANK2Q9BZ23 570 aa16.11■□□□□ 0.17
VAPA-202ENST00000400000 ANAPC15P60006 121 aa16.11■□□□□ 0.17
VAPA-202ENST00000400000 PODXL2Q9NZ53 605 aa16.11■□□□□ 0.17
VAPA-202ENST00000400000 TSHZ3Q63HK5 1081 aa16.11■□□□□ 0.17
VAPA-202ENST00000400000 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.11■□□□□ 0.173e-7■□□□□ 8.7
VAPA-202ENST00000400000 KAT6BQ8WYB5 2073 aa16.1■□□□□ 0.17
VAPA-202ENST00000400000 TERF1P54274 439 aa16.1■□□□□ 0.17
VAPA-202ENST00000400000 DUSP27Q5VZP5 1158 aa16.1■□□□□ 0.17
VAPA-202ENST00000400000 AEBP1Q8IUX7 1158 aa16.1■□□□□ 0.17
VAPA-202ENST00000400000 FANCIQ9NVI1 1328 aa16.1■□□□□ 0.17
VAPA-202ENST00000400000 CLEC11AQ9Y240 323 aa16.1■□□□□ 0.17
VAPA-202ENST00000400000 SYCE3A1L190 88 aa16.1■□□□□ 0.17
VAPA-202ENST00000400000 MBD3O95983 291 aa16.1■□□□□ 0.17
VAPA-202ENST00000400000 CCDC178Q5BJE1 867 aa16.1■□□□□ 0.17
VAPA-202ENST00000400000 CCDC112Q8NEF3 446 aa16.09■□□□□ 0.17
VAPA-202ENST00000400000 SNRKQ9NRH2 765 aa16.09■□□□□ 0.17
VAPA-202ENST00000400000 ATP5J2-PTCD1G3V325 749 aa16.09■□□□□ 0.17
VAPA-202ENST00000400000 IFIT1P09914 478 aaKnown RBP16.09■□□□□ 0.17
VAPA-202ENST00000400000 NCOA2Q15596 1464 aa16.09■□□□□ 0.17
VAPA-202ENST00000400000 PIP4K2AP48426 406 aaPredicted RBP16.09■□□□□ 0.17
VAPA-202ENST00000400000 MVPQ14764 893 aaKnown RBP16.09■□□□□ 0.17
VAPA-202ENST00000400000 NUP62CLQ9H1M0 184 aa16.09■□□□□ 0.17
VAPA-202ENST00000400000 CWC15Q9P013 229 aaKnown RBP16.09■□□□□ 0.17
VAPA-202ENST00000400000 CFTRP13569 1480 aa16.09■□□□□ 0.17
VAPA-202ENST00000400000 ANKRD18AQ8IVF6 992 aa16.09■□□□□ 0.17
VAPA-202ENST00000400000 WDR33Q9C0J8 1336 aaKnown RBP16.09■□□□□ 0.17
VAPA-202ENST00000400000 ZNF444Q8N0Y2 327 aaPredicted RBP16.08■□□□□ 0.17
VAPA-202ENST00000400000 ZNF692Q9BU19 519 aaPredicted RBP16.08■□□□□ 0.17
VAPA-202ENST00000400000 IGF1RP08069 1367 aa16.08■□□□□ 0.17
VAPA-202ENST00000400000 EPB41L2O43491 1005 aaKnown RBP16.08■□□□□ 0.16
VAPA-202ENST00000400000 VTI1AQ96AJ9 217 aa16.08■□□□□ 0.16
VAPA-202ENST00000400000 NAPBQ9H115 298 aa16.08■□□□□ 0.16
VAPA-202ENST00000400000 ZNF652Q9Y2D9 606 aa16.08■□□□□ 0.16
VAPA-202ENST00000400000 USP8P40818 1118 aa16.08■□□□□ 0.16
VAPA-202ENST00000400000 HAND2P61296 217 aa16.08■□□□□ 0.16
VAPA-202ENST00000400000 SERPINA10Q9UK55 444 aa16.08■□□□□ 0.16
VAPA-202ENST00000400000 NME9Q86XW9 330 aa16.08■□□□□ 0.16
VAPA-202ENST00000400000 NESP48681 1621 aa16.07■□□□□ 0.16
VAPA-202ENST00000400000 CDKL5O76039 1030 aa16.07■□□□□ 0.16
VAPA-202ENST00000400000 PUF60Q9UHX1 559 aaKnown RBP16.07■□□□□ 0.16
VAPA-202ENST00000400000 UQCRHLA0A096LP55 91 aa16.07■□□□□ 0.16
VAPA-202ENST00000400000 UQCRHP07919 91 aa16.07■□□□□ 0.16
VAPA-202ENST00000400000 PNISRQ8TF01 805 aaKnown RBP16.07■□□□□ 0.16
VAPA-202ENST00000400000 KIAA0754O94854 1291 aa16.07■□□□□ 0.16
VAPA-202ENST00000400000 FEZ1Q99689 392 aa16.07■□□□□ 0.16
VAPA-202ENST00000400000 LUC7LQ9NQ29 371 aaKnown RBP16.07■□□□□ 0.16
VAPA-202ENST00000400000 GOLGA6L10A0A0M3HER8 536 aa16.07■□□□□ 0.16
VAPA-202ENST00000400000 MCM2P49736 904 aa16.07■□□□□ 0.16
VAPA-202ENST00000400000 NBPF8Q3BBV2 869 aa16.07■□□□□ 0.16
VAPA-202ENST00000400000 BRD4O60885 1362 aaPredicted RBP16.07■□□□□ 0.16
VAPA-202ENST00000400000 CCP110O43303 1012 aa16.07■□□□□ 0.16
VAPA-202ENST00000400000 UBE4AQ14139 1066 aa16.07■□□□□ 0.16
VAPA-202ENST00000400000 SAMM50Q9Y512 469 aa16.07■□□□□ 0.16
VAPA-202ENST00000400000 IQSEC3Q9UPP2 1182 aaPredicted RBP16.06■□□□□ 0.16
VAPA-202ENST00000400000 TAF7Q15545 349 aaPredicted RBP16.06■□□□□ 0.16
VAPA-202ENST00000400000 TAF4BQ92750 862 aa16.06■□□□□ 0.16
VAPA-202ENST00000400000 BIN1O00499 593 aa16.06■□□□□ 0.16
VAPA-202ENST00000400000 FBLN1P23142 703 aa16.06■□□□□ 0.16
VAPA-202ENST00000400000 TNIP1Q15025 636 aa16.06■□□□□ 0.16
VAPA-202ENST00000400000 RBM26Q5T8P6 1007 aaKnown RBP16.06■□□□□ 0.16
VAPA-202ENST00000400000 FBXO31Q5XUX0 539 aaPredicted RBP16.05■□□□□ 0.16
VAPA-202ENST00000400000 PUS7Q96PZ0 661 aaKnown RBP16.05■□□□□ 0.16
VAPA-202ENST00000400000 PPP4R3AQ6IN85 833 aa16.05■□□□□ 0.16
VAPA-202ENST00000400000 DESP17661 470 aa16.05■□□□□ 0.16
VAPA-202ENST00000400000 CTNNA3Q9UI47 895 aa16.05■□□□□ 0.16
VAPA-202ENST00000400000 CACNA2D4Q7Z3S7 1137 aa16.05■□□□□ 0.16
VAPA-202ENST00000400000 SYNJ2O15056 1496 aa16.04■□□□□ 0.16
VAPA-202ENST00000400000 CUX1P39880 1505 aa16.04■□□□□ 0.16
VAPA-202ENST00000400000 NLRP5P59047 1200 aa16.04■□□□□ 0.16
VAPA-202ENST00000400000 GDPD2Q9HCC8 539 aa16.04■□□□□ 0.16
VAPA-202ENST00000400000 COMMD10Q9Y6G5 202 aa16.04■□□□□ 0.16
VAPA-202ENST00000400000 C8orf37Q96NL8 207 aa16.04■□□□□ 0.16
VAPA-202ENST00000400000 TRMT1Q9NXH9 659 aaKnown RBP16.04■□□□□ 0.16
VAPA-202ENST00000400000 CBFA2T2O43439 604 aa16.04■□□□□ 0.16
VAPA-202ENST00000400000 ANXA1P04083 346 aa16.04■□□□□ 0.16
VAPA-202ENST00000400000 JAKMIP3Q5VZ66 844 aa16.04■□□□□ 0.16
VAPA-202ENST00000400000 DYDC1Q8WWB3 177 aa16.04■□□□□ 0.16
VAPA-202ENST00000400000 ZFP91Q96JP5 570 aaPredicted RBP16.04■□□□□ 0.16
VAPA-202ENST00000400000 IFIT5Q13325 482 aaKnown RBP16.04■□□□□ 0.16
VAPA-202ENST00000400000 CKAP2LQ8IYA6 745 aa16.04■□□□□ 0.16
VAPA-202ENST00000400000 GRPEL1Q9HAV7 217 aa16.04■□□□□ 0.16
VAPA-202ENST00000400000 PRDM10Q9NQV6 1147 aa16.03■□□□□ 0.16
VAPA-202ENST00000400000 DRC1Q96MC2 740 aa16.03■□□□□ 0.16
VAPA-202ENST00000400000 NSD3Q9BZ95 1437 aa16.03■□□□□ 0.16
VAPA-202ENST00000400000 HMGN5P82970 282 aaKnown RBP16.03■□□□□ 0.16
VAPA-202ENST00000400000 RFC4P35249 363 aa16.03■□□□□ 0.16
VAPA-202ENST00000400000 ARHGAP29Q52LW3 1261 aa16.03■□□□□ 0.16
VAPA-202ENST00000400000 CFAP45Q9UL16 551 aa16.02■□□□□ 0.16
VAPA-202ENST00000400000 TMPOP42166 694 aaKnown RBP16.02■□□□□ 0.16
VAPA-202ENST00000400000 ZNF397Q8NF99 534 aaPredicted RBP16.02■□□□□ 0.16
VAPA-202ENST00000400000 SLC12A7Q9Y666 1083 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms