RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 IP6K1Q92551 441 aa28.45■■■□□ 2.14
RABGGTA-202ENST00000399409 PDE1AP54750 535 aa28.44■■■□□ 2.14
RABGGTA-202ENST00000399409 ATP8B2P98198 1209 aa28.44■■■□□ 2.14
RABGGTA-202ENST00000399409 LTV1Q96GA3 475 aaPredicted RBP28.44■■■□□ 2.14
RABGGTA-202ENST00000399409 ANKLE2Q86XL3 938 aa28.43■■■□□ 2.14
RABGGTA-202ENST00000399409 LTN1O94822 1766 aa28.43■■■□□ 2.14
RABGGTA-202ENST00000399409 SKOR2Q2VWA4 1001 aaPredicted RBP28.42■■■□□ 2.14
RABGGTA-202ENST00000399409 CHMP4AQ9BY43 222 aa28.42■■■□□ 2.14
RABGGTA-202ENST00000399409 C14orf37Q86TY3 774 aa28.41■■■□□ 2.14
RABGGTA-202ENST00000399409 NFAT5O94916 1531 aa28.41■■■□□ 2.14
RABGGTA-202ENST00000399409 ERC2O15083 957 aa28.41■■■□□ 2.14
RABGGTA-202ENST00000399409 LRRCC1Q9C099 1032 aa28.41■■■□□ 2.14
RABGGTA-202ENST00000399409 RTN4Q9NQC3 1192 aaKnown RBP28.41■■■□□ 2.14
RABGGTA-202ENST00000399409 ISY1Q9ULR0 285 aaKnown RBP28.4■■■□□ 2.14
RABGGTA-202ENST00000399409 CEMIPQ8WUJ3 1361 aa28.4■■■□□ 2.14
RABGGTA-202ENST00000399409 SALL3Q9BXA9 1300 aa28.39■■■□□ 2.14
RABGGTA-202ENST00000399409 CLEC17AQ6ZS10 378 aa28.39■■■□□ 2.13
RABGGTA-202ENST00000399409 KCNH5Q8NCM2 988 aa28.39■■■□□ 2.13
RABGGTA-202ENST00000399409 GZF1Q9H116 711 aaPredicted RBP28.38■■■□□ 2.13
RABGGTA-202ENST00000399409 IBTKQ9P2D0 1353 aaPredicted RBP28.37■■■□□ 2.13
RABGGTA-202ENST00000399409 HOXB7P09629 217 aa28.37■■■□□ 2.13
RABGGTA-202ENST00000399409 HDGFL1Q5TGJ6 251 aa28.37■■■□□ 2.13
RABGGTA-202ENST00000399409 EXOC6BQ9Y2D4 811 aa28.37■■■□□ 2.13
RABGGTA-202ENST00000399409 ZNF142P52746 1687 aaPredicted RBP28.36■■■□□ 2.13
RABGGTA-202ENST00000399409 MED1Q15648 1581 aaPredicted RBP28.36■■■□□ 2.13
RABGGTA-202ENST00000399409 ST18O60284 1047 aa28.36■■■□□ 2.13
RABGGTA-202ENST00000399409 NECTIN2Q92692 538 aa28.36■■■□□ 2.13
RABGGTA-202ENST00000399409 FOXD4L1Q9NU39 408 aa28.36■■■□□ 2.13
RABGGTA-202ENST00000399409 ADGRL3Q9HAR2 1447 aa28.36■■■□□ 2.13
RABGGTA-202ENST00000399409 SRCIN1Q9C0H9 1055 aa28.36■■■□□ 2.13
RABGGTA-202ENST00000399409 PHRF1Q9P1Y6 1649 aaKnown RBP28.36■■■□□ 2.13
RABGGTA-202ENST00000399409 FAM43AQ8N2R8 423 aa28.35■■■□□ 2.13
RABGGTA-202ENST00000399409 USHBP1Q8N6Y0 703 aa28.35■■■□□ 2.13
RABGGTA-202ENST00000399409 PNMA6EA0A0J9YXQ4 647 aa28.34■■■□□ 2.13
RABGGTA-202ENST00000399409 STAP2Q9UGK3 403 aa28.34■■■□□ 2.13
RABGGTA-202ENST00000399409 UBTFL1P0CB47 393 aaPredicted RBP28.33■■■□□ 2.13
RABGGTA-202ENST00000399409 MX1P20591 662 aa28.33■■■□□ 2.13
RABGGTA-202ENST00000399409 PSME1Q06323 249 aa28.33■■■□□ 2.13
RABGGTA-202ENST00000399409 USP44Q9H0E7 712 aa28.33■■■□□ 2.13
RABGGTA-202ENST00000399409 LRRFIP2Q9Y608 721 aaKnown RBP28.33■■■□□ 2.13
RABGGTA-202ENST00000399409 GOLGA6L22H0YM25 854 aa28.32■■■□□ 2.12
RABGGTA-202ENST00000399409 XRCC6P12956 609 aaKnown RBP eCLIP28.32■■■□□ 2.12
RABGGTA-202ENST00000399409 NUCB2P80303 420 aa28.32■■■□□ 2.12
RABGGTA-202ENST00000399409 CWC22Q9HCG8 908 aaKnown RBP28.32■■■□□ 2.12
RABGGTA-202ENST00000399409 AOX1Q06278 1338 aa28.32■■■□□ 2.12
RABGGTA-202ENST00000399409 MRE11P49959 708 aa28.32■■■□□ 2.12
RABGGTA-202ENST00000399409 NBPF6Q5VWK0 638 aa28.32■■■□□ 2.12
RABGGTA-202ENST00000399409 NBPF4Q96M43 638 aa28.32■■■□□ 2.12
RABGGTA-202ENST00000399409 TUBGCP6Q96RT7 1819 aa28.31■■■□□ 2.12
RABGGTA-202ENST00000399409 EIF4A1P60842 406 aaKnown RBP28.3■■■□□ 2.12
RABGGTA-202ENST00000399409 SSFA2P28290 1259 aa28.3■■■□□ 2.12
RABGGTA-202ENST00000399409 KDM3BQ7LBC6 1761 aa28.3■■■□□ 2.12
RABGGTA-202ENST00000399409 ESCO1Q5FWF5 840 aa28.29■■■□□ 2.12
RABGGTA-202ENST00000399409 SSH3Q8TE77 659 aa28.29■■■□□ 2.12
RABGGTA-202ENST00000399409 LMO7Q8WWI1 1683 aa28.29■■■□□ 2.12
RABGGTA-202ENST00000399409 RAB11FIP3O75154 756 aa28.29■■■□□ 2.12
RABGGTA-202ENST00000399409 AKAP4Q5JQC9 854 aa28.28■■■□□ 2.12
RABGGTA-202ENST00000399409 ESYT1Q9BSJ8 1104 aa28.28■■■□□ 2.12
RABGGTA-202ENST00000399409 PLEKHO1Q53GL0 409 aaPredicted RBP28.27■■■□□ 2.12
RABGGTA-202ENST00000399409 PHAXQ9H814 394 aaKnown RBP28.27■■■□□ 2.12
RABGGTA-202ENST00000399409 MCCP23508 829 aa28.26■■■□□ 2.11
RABGGTA-202ENST00000399409 AMOTQ4VCS5 1084 aa28.26■■■□□ 2.11
RABGGTA-202ENST00000399409 NCAPD2Q15021 1401 aa28.25■■■□□ 2.11
RABGGTA-202ENST00000399409 POLA2Q14181 598 aa28.25■■■□□ 2.11
RABGGTA-202ENST00000399409 LGR6Q9HBX8 967 aa28.25■■■□□ 2.11
RABGGTA-202ENST00000399409 OVOS2A0A0G2JMS6 1433 aa28.24■■■□□ 2.11
RABGGTA-202ENST00000399409 BAG4O95429 457 aaKnown RBP28.24■■■□□ 2.11
RABGGTA-202ENST00000399409 CYP2E1P05181 493 aaPredicted RBP28.23■■■□□ 2.11
RABGGTA-202ENST00000399409 TEFQ10587 303 aa28.23■■■□□ 2.11
RABGGTA-202ENST00000399409 CHMLP26374 656 aa28.23■■■□□ 2.11
RABGGTA-202ENST00000399409 MCM2P49736 904 aa28.23■■■□□ 2.11
RABGGTA-202ENST00000399409 ZNF530Q6P9A1 599 aaPredicted RBP28.23■■■□□ 2.11
RABGGTA-202ENST00000399409 SLIT3O75094 1523 aa28.23■■■□□ 2.11
RABGGTA-202ENST00000399409 EPB41L2O43491 1005 aaKnown RBP28.22■■■□□ 2.11
RABGGTA-202ENST00000399409 ANAPC15P60006 121 aa28.22■■■□□ 2.11
RABGGTA-202ENST00000399409 EIF2S2P20042 333 aaKnown RBP28.22■■■□□ 2.11
RABGGTA-202ENST00000399409 GRPEL1Q9HAV7 217 aa28.22■■■□□ 2.11
RABGGTA-202ENST00000399409 TRIM6-TRIM34B2RNG4 842 aa28.21■■■□□ 2.11
RABGGTA-202ENST00000399409 TSHZ3Q63HK5 1081 aa28.21■■■□□ 2.11
RABGGTA-202ENST00000399409 DNAAF4Q8WXU2 420 aa28.21■■■□□ 2.11
RABGGTA-202ENST00000399409 BTBD11A6QL63 1104 aa28.2■■■□□ 2.11
RABGGTA-202ENST00000399409 PPP1R42Q7Z4L9 355 aa28.2■■■□□ 2.11
RABGGTA-202ENST00000399409 ARHGEF25Q86VW2 580 aa28.2■■■□□ 2.1
RABGGTA-202ENST00000399409 RILPL2Q969X0 211 aa28.2■■■□□ 2.1
RABGGTA-202ENST00000399409 CHPF2Q9P2E5 772 aa28.2■■■□□ 2.1
RABGGTA-202ENST00000399409 ZBTB7CA1YPR0 619 aa28.19■■■□□ 2.1
RABGGTA-202ENST00000399409 TRHP20396 242 aaPredicted RBP28.19■■■□□ 2.1
RABGGTA-202ENST00000399409 BEND3Q5T5X7 828 aa28.19■■■□□ 2.1
RABGGTA-202ENST00000399409 IL17RAQ96F46 866 aa28.19■■■□□ 2.1
RABGGTA-202ENST00000399409 ARXQ96QS3 562 aa28.19■■■□□ 2.1
RABGGTA-202ENST00000399409 RGPD2P0DJD1 1756 aa28.19■■■□□ 2.1
RABGGTA-202ENST00000399409 NPHP4O75161 1426 aaPredicted RBP28.19■■■□□ 2.1
RABGGTA-202ENST00000399409 RBM33Q96EV2 1170 aaKnown RBP28.18■■■□□ 2.1
RABGGTA-202ENST00000399409 GCP02774 474 aa28.18■■■□□ 2.1
RABGGTA-202ENST00000399409 KLHL40Q2TBA0 621 aa28.18■■■□□ 2.1
RABGGTA-202ENST00000399409 HSP90AB4PQ58FF6 505 aa28.17■■■□□ 2.1
RABGGTA-202ENST00000399409 C1orf141Q5JVX7 400 aa28.17■■■□□ 2.1
RABGGTA-202ENST00000399409 RNMTO43148 476 aaKnown RBP28.17■■■□□ 2.1
RABGGTA-202ENST00000399409 SURF6O75683 361 aaKnown RBP28.17■■■□□ 2.1
RABGGTA-202ENST00000399409 LRRC59Q96AG4 307 aaKnown RBP28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms