RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 MPRIPQ6WCQ1 1025 aa14.7□□□□□ -0.06
COL25A1-202ENST00000399127 ANKRD24Q8TF21 1146 aa14.7□□□□□ -0.06
COL25A1-202ENST00000399127 ATP10DQ9P241 1426 aa14.7□□□□□ -0.06
COL25A1-202ENST00000399127 ZNF530Q6P9A1 599 aaPredicted RBP14.69□□□□□ -0.06
COL25A1-202ENST00000399127 BRPF3Q9ULD4 1205 aa14.69□□□□□ -0.06
COL25A1-202ENST00000399127 SPATA31A3Q5VYP0 1347 aa14.69□□□□□ -0.06
COL25A1-202ENST00000399127 FLIIQ13045 1269 aa14.69□□□□□ -0.06
COL25A1-202ENST00000399127 CCDC30Q5VVM6 783 aa14.69□□□□□ -0.06
COL25A1-202ENST00000399127 CEP85Q6P2H3 762 aa14.69□□□□□ -0.06
COL25A1-202ENST00000399127 TNS3Q68CZ2 1445 aa14.69□□□□□ -0.06
COL25A1-202ENST00000399127 ANKRD44Q8N8A2 993 aa14.68□□□□□ -0.06
COL25A1-202ENST00000399127 SLIT3O75094 1523 aa14.68□□□□□ -0.06
COL25A1-202ENST00000399127 CHRNA2Q15822 529 aa14.68□□□□□ -0.06
COL25A1-202ENST00000399127 PXDNQ92626 1479 aa14.67□□□□□ -0.06
COL25A1-202ENST00000399127 KCNQ3O43525 872 aa14.67□□□□□ -0.06
COL25A1-202ENST00000399127 EIF2S2P20042 333 aaKnown RBP14.67□□□□□ -0.06
COL25A1-202ENST00000399127 C16orf71Q8IYS4 520 aaPredicted RBP14.67□□□□□ -0.06
COL25A1-202ENST00000399127 C22orf23Q9BZE7 217 aa14.67□□□□□ -0.06
COL25A1-202ENST00000399127 DCTPP1Q9H773 170 aa14.67□□□□□ -0.06
COL25A1-202ENST00000399127 HDGFL1Q5TGJ6 251 aa14.67□□□□□ -0.06
COL25A1-202ENST00000399127 CEMIPQ8WUJ3 1361 aa14.66□□□□□ -0.06
COL25A1-202ENST00000399127 ALS2Q96Q42 1657 aa14.66□□□□□ -0.06
COL25A1-202ENST00000399127 MED1Q15648 1581 aaPredicted RBP14.66□□□□□ -0.06
COL25A1-202ENST00000399127 SMARCA5O60264 1052 aaPredicted RBP14.66□□□□□ -0.06
COL25A1-202ENST00000399127 TEFQ10587 303 aa14.66□□□□□ -0.06
COL25A1-202ENST00000399127 BMP2KLQ5H9B9 411 aa14.66□□□□□ -0.06
COL25A1-202ENST00000399127 RPAP2Q8IXW5 612 aaPredicted RBP14.66□□□□□ -0.06
COL25A1-202ENST00000399127 PHAXQ9H814 394 aaKnown RBP14.66□□□□□ -0.06
COL25A1-202ENST00000399127 FAM208AQ9UK61 1670 aaKnown RBP14.66□□□□□ -0.06
COL25A1-202ENST00000399127 CCT4P50991 539 aaKnown RBP14.65□□□□□ -0.06
COL25A1-202ENST00000399127 PLEKHO1Q53GL0 409 aaPredicted RBP14.65□□□□□ -0.06
COL25A1-202ENST00000399127 OTUD7AQ8TE49 926 aaPredicted RBP14.65□□□□□ -0.06
COL25A1-202ENST00000399127 CSB-PGBD3P0DP91 1061 aa14.65□□□□□ -0.06
COL25A1-202ENST00000399127 BECN1Q14457 450 aa14.64□□□□□ -0.07
COL25A1-202ENST00000399127 SLKQ9H2G2 1235 aaPredicted RBP14.64□□□□□ -0.07
COL25A1-202ENST00000399127 PHRF1Q9P1Y6 1649 aaKnown RBP14.64□□□□□ -0.07
COL25A1-202ENST00000399127 RGPD5Q99666 1765 aa14.64□□□□□ -0.07
COL25A1-202ENST00000399127 BTBD11A6QL63 1104 aa14.64□□□□□ -0.07
COL25A1-202ENST00000399127 AKAP4Q5JQC9 854 aa14.64□□□□□ -0.07
COL25A1-202ENST00000399127 C1orf141Q5JVX7 400 aa14.64□□□□□ -0.07
COL25A1-202ENST00000399127 NLRP2Q9NX02 1062 aa14.64□□□□□ -0.07
COL25A1-202ENST00000399127 SOS2Q07890 1332 aaPredicted RBP14.64□□□□□ -0.07
COL25A1-202ENST00000399127 ANXA1P04083 346 aa14.63□□□□□ -0.07
COL25A1-202ENST00000399127 EIF4A1P60842 406 aaKnown RBP14.63□□□□□ -0.07
COL25A1-202ENST00000399127 PLEKHM2Q8IWE5 1019 aa14.63□□□□□ -0.07
COL25A1-202ENST00000399127 SPRYD3Q8NCJ5 442 aa14.63□□□□□ -0.07
COL25A1-202ENST00000399127 TBC1D2Q9BYX2 928 aa14.63□□□□□ -0.07
COL25A1-202ENST00000399127 BABAM1Q9NWV8 329 aa14.63□□□□□ -0.07
COL25A1-202ENST00000399127 GSPT1P15170 499 aaKnown RBP14.62□□□□□ -0.07
COL25A1-202ENST00000399127 NFKBIBQ15653 356 aa14.62□□□□□ -0.07
COL25A1-202ENST00000399127 AMOTQ4VCS5 1084 aa14.62□□□□□ -0.07
COL25A1-202ENST00000399127 TBC1D9Q6ZT07 1266 aa14.62□□□□□ -0.07
COL25A1-202ENST00000399127 CHPF2Q9P2E5 772 aa14.62□□□□□ -0.07
COL25A1-202ENST00000399127 ERBB3P21860 1342 aa14.62□□□□□ -0.07
COL25A1-202ENST00000399127 GNAI2P04899 355 aa14.61□□□□□ -0.07
COL25A1-202ENST00000399127 RNMTO43148 476 aaKnown RBP14.61□□□□□ -0.07
COL25A1-202ENST00000399127 PRDM11Q9NQV5 511 aa14.61□□□□□ -0.07
COL25A1-202ENST00000399127 EXOC6BQ9Y2D4 811 aa14.6□□□□□ -0.07
COL25A1-202ENST00000399127 LMO7Q8WWI1 1683 aa14.59□□□□□ -0.07
COL25A1-202ENST00000399127 HMMRO75330 724 aa14.59□□□□□ -0.07
COL25A1-202ENST00000399127 LRRFIP2Q9Y608 721 aaKnown RBP14.59□□□□□ -0.07
COL25A1-202ENST00000399127 PNMA6EA0A0J9YXQ4 647 aa14.59□□□□□ -0.07
COL25A1-202ENST00000399127 PRAMEF22A3QJZ6 481 aa14.59□□□□□ -0.07
COL25A1-202ENST00000399127 SOS1Q07889 1333 aaPredicted RBP14.58□□□□□ -0.08
COL25A1-202ENST00000399127 TTC22Q5TAA0 569 aa14.58□□□□□ -0.08
COL25A1-202ENST00000399127 USP44Q9H0E7 712 aa14.58□□□□□ -0.08
COL25A1-202ENST00000399127 KDM3BQ7LBC6 1761 aa14.58□□□□□ -0.08
COL25A1-202ENST00000399127 NCAPD2Q15021 1401 aa14.58□□□□□ -0.08
COL25A1-202ENST00000399127 FRAT2O75474 233 aaPredicted RBP14.57□□□□□ -0.08
COL25A1-202ENST00000399127 GNAI3P08754 354 aa14.57□□□□□ -0.08
COL25A1-202ENST00000399127 RAPGEF4Q8WZA2 1011 aa14.57□□□□□ -0.08
COL25A1-202ENST00000399127 USP35Q9P2H5 1018 aa14.57□□□□□ -0.08
COL25A1-202ENST00000399127 CACNA1FO60840 1977 aa14.57□□□□□ -0.08
COL25A1-202ENST00000399127 PI4KAP2A4QPH2 592 aa14.57□□□□□ -0.08
COL25A1-202ENST00000399127 PI4KAP1Q8N8J0 262 aa14.57□□□□□ -0.08
COL25A1-202ENST00000399127 CDC45O75419 566 aa14.56□□□□□ -0.08
COL25A1-202ENST00000399127 PIP4K2BP78356 416 aa14.56□□□□□ -0.08
COL25A1-202ENST00000399127 TSHZ3Q63HK5 1081 aa14.56□□□□□ -0.08
COL25A1-202ENST00000399127 UBTFL1P0CB47 393 aaPredicted RBP14.55□□□□□ -0.08
COL25A1-202ENST00000399127 PROSER3Q2NL68 480 aa14.55□□□□□ -0.08
COL25A1-202ENST00000399127 SRCIN1Q9C0H9 1055 aa14.55□□□□□ -0.08
COL25A1-202ENST00000399127 RBM25P49756 843 aaKnown RBP14.55□□□□□ -0.08
COL25A1-202ENST00000399127 SLC39A6Q13433 755 aa14.55□□□□□ -0.08
COL25A1-202ENST00000399127 STRN4Q9NRL3 753 aa14.55□□□□□ -0.08
COL25A1-202ENST00000399127 CPDO75976 1380 aa14.54□□□□□ -0.08
COL25A1-202ENST00000399127 SDSP20132 328 aa14.54□□□□□ -0.08
COL25A1-202ENST00000399127 LTBP4Q8N2S1 1624 aa14.54□□□□□ -0.08
COL25A1-202ENST00000399127 GIGYF1O75420 1035 aaPredicted RBP14.54□□□□□ -0.08
COL25A1-202ENST00000399127 HOXB7P09629 217 aa14.54□□□□□ -0.08
COL25A1-202ENST00000399127 NBPF7P0C2Y1 421 aaPredicted RBP14.54□□□□□ -0.08
COL25A1-202ENST00000399127 TATP17735 454 aaPredicted RBP14.54□□□□□ -0.08
COL25A1-202ENST00000399127 ATP8B2P98198 1209 aa14.54□□□□□ -0.08
COL25A1-202ENST00000399127 TOM1L2Q6ZVM7 507 aa14.54□□□□□ -0.08
COL25A1-202ENST00000399127 CAMTA1Q9Y6Y1 1673 aa14.53□□□□□ -0.08
COL25A1-202ENST00000399127 EVA1CP58658 441 aa14.53□□□□□ -0.08
COL25A1-202ENST00000399127 DNAAF4Q8WXU2 420 aa14.53□□□□□ -0.08
COL25A1-202ENST00000399127 ANTXR1Q9H6X2 564 aa14.53□□□□□ -0.08
COL25A1-202ENST00000399127 MEGF6O75095 1541 aa14.53□□□□□ -0.08
COL25A1-202ENST00000399127 A0A0U1RQG5 324 aaPredicted RBP14.52□□□□□ -0.08
COL25A1-202ENST00000399127 NFATC2IPQ8NCF5 419 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms