RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 CCDC30Q5VVM6 783 aa14.04□□□□□ -0.16
C4orf3-201ENST00000399075 OTUD7AQ8TE49 926 aaPredicted RBP14.04□□□□□ -0.16
C4orf3-201ENST00000399075 GNAI2P04899 355 aa14.04□□□□□ -0.16
C4orf3-201ENST00000399075 HSP90AA1P07900 732 aaKnown RBP14.04□□□□□ -0.16
C4orf3-201ENST00000399075 TUBGCP6Q96RT7 1819 aa14.03□□□□□ -0.16
C4orf3-201ENST00000399075 SKOR2Q2VWA4 1001 aaPredicted RBP14.03□□□□□ -0.16
C4orf3-201ENST00000399075 RBM42Q9BTD8 480 aaKnown RBP14.03□□□□□ -0.16
C4orf3-201ENST00000399075 GNAI3P08754 354 aa14.03□□□□□ -0.16
C4orf3-201ENST00000399075 REC8O95072 547 aa14.02□□□□□ -0.16
C4orf3-201ENST00000399075 SMARCA5O60264 1052 aaPredicted RBP14.02□□□□□ -0.17
C4orf3-201ENST00000399075 FLIIQ13045 1269 aa14.02□□□□□ -0.17
C4orf3-201ENST00000399075 F6X3S4 739 aa14.01□□□□□ -0.17
C4orf3-201ENST00000399075 KCNA6P17658 529 aa14.01□□□□□ -0.17
C4orf3-201ENST00000399075 SLC4A10Q6U841 1118 aa14.01□□□□□ -0.17
C4orf3-201ENST00000399075 MED1Q15648 1581 aaPredicted RBP14.01□□□□□ -0.17
C4orf3-201ENST00000399075 XRCC6P12956 609 aaKnown RBP eCLIP14.01□□□□□ -0.17
C4orf3-201ENST00000399075 PHRF1Q9P1Y6 1649 aaKnown RBP14.01□□□□□ -0.17
C4orf3-201ENST00000399075 LTN1O94822 1766 aa14.01□□□□□ -0.17
C4orf3-201ENST00000399075 MRE11P49959 708 aa14.01□□□□□ -0.17
C4orf3-201ENST00000399075 SALL3Q9BXA9 1300 aa14.01□□□□□ -0.17
C4orf3-201ENST00000399075 CHD2O14647 1828 aaKnown RBP14□□□□□ -0.17
C4orf3-201ENST00000399075 PDE1AP54750 535 aa14□□□□□ -0.17
C4orf3-201ENST00000399075 TAF7Q15545 349 aaPredicted RBP14□□□□□ -0.17
C4orf3-201ENST00000399075 NFAT5O94916 1531 aa14□□□□□ -0.17
C4orf3-201ENST00000399075 ERC2O15083 957 aa13.99□□□□□ -0.17
C4orf3-201ENST00000399075 IL17REQ8NFR9 667 aa13.99□□□□□ -0.17
C4orf3-201ENST00000399075 GZF1Q9H116 711 aaPredicted RBP13.99□□□□□ -0.17
C4orf3-201ENST00000399075 CEMIPQ8WUJ3 1361 aa13.98□□□□□ -0.17
C4orf3-201ENST00000399075 IBTKQ9P2D0 1353 aaPredicted RBP13.98□□□□□ -0.17
C4orf3-201ENST00000399075 ATP8B2P98198 1209 aa13.98□□□□□ -0.17
C4orf3-201ENST00000399075 FKBP5Q13451 457 aaPredicted RBP13.98□□□□□ -0.17
C4orf3-201ENST00000399075 ABTB2Q8N961 1025 aa13.98□□□□□ -0.17
C4orf3-201ENST00000399075 APBB1O00213 710 aa13.98□□□□□ -0.17
C4orf3-201ENST00000399075 ST18O60284 1047 aa13.98□□□□□ -0.17
C4orf3-201ENST00000399075 LRRCC1Q9C099 1032 aa13.98□□□□□ -0.17
C4orf3-201ENST00000399075 CWC22Q9HCG8 908 aaKnown RBP13.98□□□□□ -0.17
C4orf3-201ENST00000399075 NUCB2P80303 420 aa13.97□□□□□ -0.17
C4orf3-201ENST00000399075 PLPPR3Q6T4P5 718 aa13.97□□□□□ -0.17
C4orf3-201ENST00000399075 KDM3BQ7LBC6 1761 aa13.97□□□□□ -0.17
C4orf3-201ENST00000399075 ZNF142P52746 1687 aaPredicted RBP13.97□□□□□ -0.17
C4orf3-201ENST00000399075 AOX1Q06278 1338 aa13.97□□□□□ -0.17
C4orf3-201ENST00000399075 GOLGA6L22H0YM25 854 aa13.97□□□□□ -0.17
C4orf3-201ENST00000399075 HOXB7P09629 217 aa13.96□□□□□ -0.17
C4orf3-201ENST00000399075 IP6K1Q92551 441 aa13.96□□□□□ -0.17
C4orf3-201ENST00000399075 CHMP4AQ9BY43 222 aa13.96□□□□□ -0.17
C4orf3-201ENST00000399075 STAP2Q9UGK3 403 aa13.96□□□□□ -0.17
C4orf3-201ENST00000399075 ADGRL3Q9HAR2 1447 aa13.96□□□□□ -0.17
C4orf3-201ENST00000399075 LMO7Q8WWI1 1683 aa13.96□□□□□ -0.17
C4orf3-201ENST00000399075 CYP2E1P05181 493 aaPredicted RBP13.96□□□□□ -0.17
C4orf3-201ENST00000399075 SSFA2P28290 1259 aa13.96□□□□□ -0.17
C4orf3-201ENST00000399075 SRCIN1Q9C0H9 1055 aa13.96□□□□□ -0.17
C4orf3-201ENST00000399075 PHF8Q9UPP1 1060 aa13.96□□□□□ -0.17
C4orf3-201ENST00000399075 PAXIP1Q6ZW49 1069 aaPredicted RBP13.95□□□□□ -0.18
C4orf3-201ENST00000399075 FOXD4L1Q9NU39 408 aa13.95□□□□□ -0.18
C4orf3-201ENST00000399075 MX1P20591 662 aa13.95□□□□□ -0.18
C4orf3-201ENST00000399075 EXOC6BQ9Y2D4 811 aa13.95□□□□□ -0.18
C4orf3-201ENST00000399075 NUTM2GQ5VZR2 741 aa13.95□□□□□ -0.18
C4orf3-201ENST00000399075 GRPEL1Q9HAV7 217 aa13.95□□□□□ -0.18
C4orf3-201ENST00000399075 PNMA6EA0A0J9YXQ4 647 aa13.94□□□□□ -0.18
C4orf3-201ENST00000399075 BAG4O95429 457 aaKnown RBP13.94□□□□□ -0.18
C4orf3-201ENST00000399075 IL17RAQ96F46 866 aa13.94□□□□□ -0.18
C4orf3-201ENST00000399075 EPB41L2O43491 1005 aaKnown RBP13.93□□□□□ -0.18
C4orf3-201ENST00000399075 HDGFL1Q5TGJ6 251 aa13.93□□□□□ -0.18
C4orf3-201ENST00000399075 USP44Q9H0E7 712 aa13.93□□□□□ -0.18
C4orf3-201ENST00000399075 SSH3Q8TE77 659 aa13.93□□□□□ -0.18
C4orf3-201ENST00000399075 ESYT1Q9BSJ8 1104 aa13.93□□□□□ -0.18
C4orf3-201ENST00000399075 LRRFIP2Q9Y608 721 aaKnown RBP13.93□□□□□ -0.18
C4orf3-201ENST00000399075 NCAPD2Q15021 1401 aa13.93□□□□□ -0.18
C4orf3-201ENST00000399075 UBTFL1P0CB47 393 aaPredicted RBP13.92□□□□□ -0.18
C4orf3-201ENST00000399075 KLHL40Q2TBA0 621 aa13.92□□□□□ -0.18
C4orf3-201ENST00000399075 OVOS2A0A0G2JMS6 1433 aa13.92□□□□□ -0.18
C4orf3-201ENST00000399075 MCM2P49736 904 aa13.92□□□□□ -0.18
C4orf3-201ENST00000399075 ANAPC15P60006 121 aa13.92□□□□□ -0.18
C4orf3-201ENST00000399075 KCNH5Q8NCM2 988 aa13.92□□□□□ -0.18
C4orf3-201ENST00000399075 LTV1Q96GA3 475 aaPredicted RBP13.92□□□□□ -0.18
C4orf3-201ENST00000399075 PANK2Q9BZ23 570 aa13.92□□□□□ -0.18
C4orf3-201ENST00000399075 RAB11FIP3O75154 756 aa13.92□□□□□ -0.18
C4orf3-201ENST00000399075 HSP90AA2PQ14568 343 aaPredicted RBP13.91□□□□□ -0.18
C4orf3-201ENST00000399075 MCCP23508 829 aa13.91□□□□□ -0.18
C4orf3-201ENST00000399075 EIF4A1P60842 406 aaKnown RBP13.91□□□□□ -0.18
C4orf3-201ENST00000399075 POLA2Q14181 598 aa13.91□□□□□ -0.18
C4orf3-201ENST00000399075 LMTK3Q96Q04 1460 aa13.9□□□□□ -0.18
C4orf3-201ENST00000399075 CHMLP26374 656 aa13.9□□□□□ -0.18
C4orf3-201ENST00000399075 ANKLE2Q86XL3 938 aa13.9□□□□□ -0.18
C4orf3-201ENST00000399075 NECTIN2Q92692 538 aa13.9□□□□□ -0.18
C4orf3-201ENST00000399075 SLIT3O75094 1523 aa13.9□□□□□ -0.18
C4orf3-201ENST00000399075 CAMTA1Q9Y6Y1 1673 aa13.9□□□□□ -0.18
C4orf3-201ENST00000399075 NBPF6Q5VWK0 638 aa13.89□□□□□ -0.19
C4orf3-201ENST00000399075 USHBP1Q8N6Y0 703 aa13.89□□□□□ -0.19
C4orf3-201ENST00000399075 NBPF4Q96M43 638 aa13.89□□□□□ -0.19
C4orf3-201ENST00000399075 AK9Q5TCS8 1911 aa13.89□□□□□ -0.19
C4orf3-201ENST00000399075 AKAP4Q5JQC9 854 aa13.89□□□□□ -0.19
C4orf3-201ENST00000399075 C14orf37Q86TY3 774 aa13.89□□□□□ -0.19
C4orf3-201ENST00000399075 ARXQ96QS3 562 aa13.89□□□□□ -0.19
C4orf3-201ENST00000399075 RGPD2P0DJD1 1756 aa13.88□□□□□ -0.19
C4orf3-201ENST00000399075 PHAXQ9H814 394 aaKnown RBP13.88□□□□□ -0.19
C4orf3-201ENST00000399075 CRYBG1Q9Y4K1 1723 aa13.88□□□□□ -0.19
C4orf3-201ENST00000399075 GAS2L3Q86XJ1 694 aa13.88□□□□□ -0.19
C4orf3-201ENST00000399075 RRAGDQ9NQL2 400 aaPredicted RBP13.88□□□□□ -0.19
C4orf3-201ENST00000399075 AMOTQ4VCS5 1084 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms