RNA–Protein interactions for RNA: ENST00000398975.6

COL13A1-204, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 1,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-204ENST00000398975 ZBTB7AO95365 584 aa19.38■□□□□ 0.69
COL13A1-204ENST00000398975 SIK1P57059 783 aa19.38■□□□□ 0.69
COL13A1-204ENST00000398975 CABP4P57796 275 aa19.38■□□□□ 0.69
COL13A1-204ENST00000398975 ITPK1Q13572 414 aa19.38■□□□□ 0.69
COL13A1-204ENST00000398975 PNPLA7Q6ZV29 1317 aa19.38■□□□□ 0.69
COL13A1-204ENST00000398975 NUDCQ9Y266 331 aa19.38■□□□□ 0.69
COL13A1-204ENST00000398975 AMIGO3Q86WK7 504 aa19.37■□□□□ 0.69
COL13A1-204ENST00000398975 LINC00116Q8NCU8 138 aa19.36■□□□□ 0.69
COL13A1-204ENST00000398975 ZNF831Q5JPB2 1677 aa19.36■□□□□ 0.69
COL13A1-204ENST00000398975 MAP3K5Q99683 1374 aa19.35■□□□□ 0.69
COL13A1-204ENST00000398975 SIPA1L3O60292 1781 aaPredicted RBP19.35■□□□□ 0.69
COL13A1-204ENST00000398975 ZNF316A6NFI3 1004 aaPredicted RBP19.35■□□□□ 0.69
COL13A1-204ENST00000398975 FCHSD2O94868 740 aa19.35■□□□□ 0.69
COL13A1-204ENST00000398975 SMIM5Q71RC9 77 aa19.35■□□□□ 0.69
COL13A1-204ENST00000398975 IL17REQ8NFR9 667 aa19.35■□□□□ 0.69
COL13A1-204ENST00000398975 SLC52A2Q9HAB3 445 aa19.35■□□□□ 0.69
COL13A1-204ENST00000398975 UBR3Q6ZT12 1888 aa19.35■□□□□ 0.69
COL13A1-204ENST00000398975 COL5A3P25940 1745 aaPredicted RBP19.34■□□□□ 0.69
COL13A1-204ENST00000398975 MYBBP1AQ9BQG0 1328 aaKnown RBP19.34■□□□□ 0.69
COL13A1-204ENST00000398975 PTGER2P43116 358 aa19.34■□□□□ 0.69
COL13A1-204ENST00000398975 PRKRIP1Q9H875 184 aaPredicted RBP19.34■□□□□ 0.69
COL13A1-204ENST00000398975 SPON1Q9HCB6 807 aa19.34■□□□□ 0.69
COL13A1-204ENST00000398975 TFCP2L1Q9NZI6 479 aa19.34■□□□□ 0.69
COL13A1-204ENST00000398975 ATF5Q9Y2D1 282 aaPredicted RBP19.34■□□□□ 0.69
COL13A1-204ENST00000398975 GAS2L2Q8NHY3 880 aa19.33■□□□□ 0.68
COL13A1-204ENST00000398975 TJP1Q07157 1748 aa19.33■□□□□ 0.68
COL13A1-204ENST00000398975 COL24A1Q17RW2 1714 aa19.33■□□□□ 0.68
COL13A1-204ENST00000398975 ATP6V1AP38606 617 aa19.32■□□□□ 0.68
COL13A1-204ENST00000398975 COL23A1Q86Y22 540 aaPredicted RBP19.32■□□□□ 0.68
COL13A1-204ENST00000398975 PLEKHF1Q96S99 279 aa19.32■□□□□ 0.68
COL13A1-204ENST00000398975 SGIP1Q9BQI5 828 aa19.32■□□□□ 0.68
COL13A1-204ENST00000398975 KCPQ6ZWJ8 1503 aa19.31■□□□□ 0.68
COL13A1-204ENST00000398975 GNAT3A8MTJ3 354 aa19.31■□□□□ 0.68
COL13A1-204ENST00000398975 SLC39A6Q13433 755 aa19.31■□□□□ 0.68
COL13A1-204ENST00000398975 RBM42Q9BTD8 480 aaKnown RBP19.31■□□□□ 0.68
COL13A1-204ENST00000398975 CICQ96RK0 1608 aaPredicted RBP19.31■□□□□ 0.68
COL13A1-204ENST00000398975 CEMIPQ8WUJ3 1361 aa19.31■□□□□ 0.68
COL13A1-204ENST00000398975 MYH14Q7Z406 1995 aaKnown RBP19.3■□□□□ 0.68
COL13A1-204ENST00000398975 UBR2Q8IWV8 1755 aa19.3■□□□□ 0.68
COL13A1-204ENST00000398975 DLG5Q8TDM6 1919 aa19.3■□□□□ 0.68
COL13A1-204ENST00000398975 PTCD1O75127 700 aaKnown RBP19.3■□□□□ 0.68
COL13A1-204ENST00000398975 MTFR1LQ9H019 292 aa19.3■□□□□ 0.68
COL13A1-204ENST00000398975 DCTN1Q14203 1278 aa19.26■□□□□ 0.67
COL13A1-204ENST00000398975 MCM10Q7L590 875 aa19.26■□□□□ 0.67
COL13A1-204ENST00000398975 AK7Q96M32 723 aa19.26■□□□□ 0.67
COL13A1-204ENST00000398975 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.24■□□□□ 0.67
COL13A1-204ENST00000398975 GNPATO15228 680 aa19.24■□□□□ 0.67
COL13A1-204ENST00000398975 PHF14O94880 888 aa19.24■□□□□ 0.67
COL13A1-204ENST00000398975 SLC16A10Q8TF71 515 aa19.24■□□□□ 0.67
COL13A1-204ENST00000398975 MSH5O43196 834 aa19.23■□□□□ 0.67
COL13A1-204ENST00000398975 KCNQ3O43525 872 aa19.23■□□□□ 0.67
COL13A1-204ENST00000398975 CCDC184Q52MB2 194 aa19.23■□□□□ 0.67
COL13A1-204ENST00000398975 DNAJC10Q8IXB1 793 aa19.23■□□□□ 0.67
COL13A1-204ENST00000398975 CNTNAP4Q9C0A0 1308 aa19.23■□□□□ 0.67
COL13A1-204ENST00000398975 TEFQ10587 303 aa19.22■□□□□ 0.67
COL13A1-204ENST00000398975 RC3H1Q5TC82 1133 aaKnown RBP19.22■□□□□ 0.67
COL13A1-204ENST00000398975 MSL1Q68DK7 614 aa19.22■□□□□ 0.67
COL13A1-204ENST00000398975 C4AP0C0L4 1744 aa19.21■□□□□ 0.67
COL13A1-204ENST00000398975 SSFA2P28290 1259 aa19.21■□□□□ 0.67
COL13A1-204ENST00000398975 NFE2L2Q16236 605 aa19.21■□□□□ 0.67
COL13A1-204ENST00000398975 ZNF496Q96IT1 587 aaPredicted RBP19.21■□□□□ 0.67
COL13A1-204ENST00000398975 PPP1R1BQ9UD71 204 aaPredicted RBP19.21■□□□□ 0.67
COL13A1-204ENST00000398975 CRKLP46109 303 aaKnown RBP19.2■□□□□ 0.66
COL13A1-204ENST00000398975 INTS5Q6P9B9 1019 aaKnown RBP19.2■□□□□ 0.66
COL13A1-204ENST00000398975 ZNF790Q6PG37 636 aa19.2■□□□□ 0.66
COL13A1-204ENST00000398975 THUMPD2Q9BTF0 503 aaKnown RBP19.2■□□□□ 0.66
COL13A1-204ENST00000398975 HTATSF1O43719 755 aaKnown RBP19.19■□□□□ 0.66
COL13A1-204ENST00000398975 CYP19A1P11511 503 aaPredicted RBP19.19■□□□□ 0.66
COL13A1-204ENST00000398975 HMGB2P26583 209 aaKnown RBP19.19■□□□□ 0.66
COL13A1-204ENST00000398975 CCDC146Q8IYE0 955 aa19.19■□□□□ 0.66
COL13A1-204ENST00000398975 FLAD1Q8NFF5 587 aa19.19■□□□□ 0.66
COL13A1-204ENST00000398975 ADAMTS8Q9UP79 889 aa19.19■□□□□ 0.66
COL13A1-204ENST00000398975 RPS6KA4O75676 772 aa19.18■□□□□ 0.66
COL13A1-204ENST00000398975 RTF1Q92541 710 aaKnown RBP19.18■□□□□ 0.66
COL13A1-204ENST00000398975 ARXQ96QS3 562 aa19.18■□□□□ 0.66
COL13A1-204ENST00000398975 FHDC1Q9C0D6 1143 aaPredicted RBP19.17■□□□□ 0.66
COL13A1-204ENST00000398975 RTCBQ9Y3I0 505 aaKnown RBP19.17■□□□□ 0.66
COL13A1-204ENST00000398975 MAPK8IP3Q9UPT6 1336 aa19.17■□□□□ 0.66
COL13A1-204ENST00000398975 BTBD11A6QL63 1104 aa19.16■□□□□ 0.66
COL13A1-204ENST00000398975 VSIG10Q8N0Z9 540 aa19.16■□□□□ 0.66
COL13A1-204ENST00000398975 ARHGEF1Q92888 912 aaKnown RBP19.16■□□□□ 0.66
COL13A1-204ENST00000398975 HEG1Q9ULI3 1381 aa19.16■□□□□ 0.66
COL13A1-204ENST00000398975 KDM3BQ7LBC6 1761 aa19.16■□□□□ 0.66
COL13A1-204ENST00000398975 TMPOP42166 694 aaKnown RBP19.15■□□□□ 0.66
COL13A1-204ENST00000398975 TTC5Q8N0Z6 440 aa19.15■□□□□ 0.66
COL13A1-204ENST00000398975 PNNQ9H307 717 aaKnown RBP19.15■□□□□ 0.66
COL13A1-204ENST00000398975 CCDC87Q9NVE4 849 aa19.15■□□□□ 0.66
COL13A1-204ENST00000398975 MIS18AQ9NYP9 233 aa19.15■□□□□ 0.66
COL13A1-204ENST00000398975 RRP7AQ9Y3A4 280 aaKnown RBP19.15■□□□□ 0.66
COL13A1-204ENST00000398975 NEFMP07197 916 aa19.14■□□□□ 0.65
COL13A1-204ENST00000398975 WDR43Q15061 677 aaKnown RBP eCLIP19.14■□□□□ 0.65
COL13A1-204ENST00000398975 TRAPPC3LQ5T215 181 aa19.14■□□□□ 0.65
COL13A1-204ENST00000398975 SYT17Q9BSW7 474 aa19.14■□□□□ 0.65
COL13A1-204ENST00000398975 PRAMEF22A3QJZ6 481 aa19.13■□□□□ 0.65
COL13A1-204ENST00000398975 POLD1P28340 1107 aa19.13■□□□□ 0.65
COL13A1-204ENST00000398975 ZBTB1Q9Y2K1 713 aa19.13■□□□□ 0.65
COL13A1-204ENST00000398975 SOS1Q07889 1333 aaPredicted RBP19.13■□□□□ 0.65
COL13A1-204ENST00000398975 ADRA2BP18089 450 aa19.12■□□□□ 0.65
COL13A1-204ENST00000398975 RIPK4P57078 832 aa19.12■□□□□ 0.65
COL13A1-204ENST00000398975 TAF7Q15545 349 aaPredicted RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms