RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 CFTRP13569 1480 aa10.97□□□□□ -0.65
ATL3-201ENST00000398868 GNAT3A8MTJ3 354 aa10.97□□□□□ -0.65
ATL3-201ENST00000398868 SPTY2D1Q68D10 685 aaPredicted RBP10.97□□□□□ -0.65
ATL3-201ENST00000398868 FEZ1Q99689 392 aa10.97□□□□□ -0.65
ATL3-201ENST00000398868 TERF1P54274 439 aa10.97□□□□□ -0.65
ATL3-201ENST00000398868 PLS1Q14651 629 aa10.97□□□□□ -0.65
ATL3-201ENST00000398868 FILIP1Q7Z7B0 1213 aa10.97□□□□□ -0.65
ATL3-201ENST00000398868 FERMT3Q86UX7 667 aa10.97□□□□□ -0.65
ATL3-201ENST00000398868 GTF2F1P35269 517 aaKnown RBP eCLIP10.96□□□□□ -0.65
ATL3-201ENST00000398868 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.96□□□□□ -0.65
ATL3-201ENST00000398868 RIMBP2O15034 1052 aa10.96□□□□□ -0.66
ATL3-201ENST00000398868 PICALMQ13492 652 aa10.96□□□□□ -0.66
ATL3-201ENST00000398868 SMARCE1Q969G3 411 aa10.96□□□□□ -0.66
ATL3-201ENST00000398868 BBXQ8WY36 941 aaPredicted RBP10.96□□□□□ -0.66
ATL3-201ENST00000398868 HAND2P61296 217 aa10.96□□□□□ -0.66
ATL3-201ENST00000398868 CCDC184Q52MB2 194 aa10.96□□□□□ -0.66
ATL3-201ENST00000398868 CAVIN4Q5BKX8 364 aa10.95□□□□□ -0.66
ATL3-201ENST00000398868 ERC1Q8IUD2 1116 aa10.95□□□□□ -0.66
ATL3-201ENST00000398868 TRIM22Q8IYM9 498 aa10.95□□□□□ -0.66
ATL3-201ENST00000398868 TNMDQ9H2S6 317 aa10.95□□□□□ -0.66
ATL3-201ENST00000398868 C16orf71Q8IYS4 520 aaPredicted RBP10.95□□□□□ -0.66
ATL3-201ENST00000398868 CCDC24Q8N4L8 307 aa10.95□□□□□ -0.66
ATL3-201ENST00000398868 AMOTL2Q9Y2J4 779 aa10.95□□□□□ -0.66
ATL3-201ENST00000398868 EXOC5O00471 708 aa10.95□□□□□ -0.66
ATL3-201ENST00000398868 CASTP20810 708 aaKnown RBP10.95□□□□□ -0.66
ATL3-201ENST00000398868 CCT2P78371 535 aaKnown RBP10.95□□□□□ -0.66
ATL3-201ENST00000398868 RNF187Q5TA31 235 aaPredicted RBP10.95□□□□□ -0.66
ATL3-201ENST00000398868 MYO6Q9UM54 1294 aa10.95□□□□□ -0.66
ATL3-201ENST00000398868 MYOM3Q5VTT5 1437 aa10.95□□□□□ -0.66
ATL3-201ENST00000398868 AKNAQ7Z591 1439 aa10.95□□□□□ -0.66
ATL3-201ENST00000398868 CCDC7Q96M83 1385 aa10.95□□□□□ -0.66
ATL3-201ENST00000398868 PPP4R3BQ5MIZ7 849 aa10.95□□□□□ -0.66
ATL3-201ENST00000398868 CCDC113Q9H0I3 377 aa10.95□□□□□ -0.66
ATL3-201ENST00000398868 EMILIN1Q9Y6C2 1016 aa10.95□□□□□ -0.66
ATL3-201ENST00000398868 CYP46A1Q9Y6A2 500 aa10.95□□□□□ -0.66
ATL3-201ENST00000398868 BCCIPQ9P287 314 aaKnown RBP eCLIP10.94□□□□□ -0.66
ATL3-201ENST00000398868 SAMM50Q9Y512 469 aa10.94□□□□□ -0.66
ATL3-201ENST00000398868 FAM83GA6ND36 823 aa10.94□□□□□ -0.66
ATL3-201ENST00000398868 NF2P35240 595 aa10.94□□□□□ -0.66
ATL3-201ENST00000398868 PANK2Q9BZ23 570 aa10.94□□□□□ -0.66
ATL3-201ENST00000398868 KRT28Q7Z3Y7 464 aa10.94□□□□□ -0.66
ATL3-201ENST00000398868 GOLGA6L7A0A1B0GV03 622 aa10.94□□□□□ -0.66
ATL3-201ENST00000398868 SYCE3A1L190 88 aa10.94□□□□□ -0.66
ATL3-201ENST00000398868 LETM1O95202 739 aaPredicted RBP10.94□□□□□ -0.66
ATL3-201ENST00000398868 FILIP1LQ4L180 1135 aa10.94□□□□□ -0.66
ATL3-201ENST00000398868 DUSP27Q5VZP5 1158 aa10.94□□□□□ -0.66
ATL3-201ENST00000398868 PRKG1Q13976 671 aa10.94□□□□□ -0.66
ATL3-201ENST00000398868 CFAP45Q9UL16 551 aa10.94□□□□□ -0.66
ATL3-201ENST00000398868 MACROD2A1Z1Q3 448 aa10.93□□□□□ -0.66
ATL3-201ENST00000398868 EIF3JO75822 258 aaKnown RBP10.93□□□□□ -0.66
ATL3-201ENST00000398868 LARP1BQ659C4 914 aaKnown RBP10.93□□□□□ -0.66
ATL3-201ENST00000398868 TAF7Q15545 349 aaPredicted RBP10.93□□□□□ -0.66
ATL3-201ENST00000398868 ZRSR2Q15696 482 aaKnown RBP10.93□□□□□ -0.66
ATL3-201ENST00000398868 SLC39A6Q13433 755 aa10.93□□□□□ -0.66
ATL3-201ENST00000398868 SERPINA10Q9UK55 444 aa10.93□□□□□ -0.66
ATL3-201ENST00000398868 IGF1RP08069 1367 aa10.93□□□□□ -0.66
ATL3-201ENST00000398868 TMCO3Q6UWJ1 677 aa10.93□□□□□ -0.66
ATL3-201ENST00000398868 FAM170AA1A519 330 aa10.92□□□□□ -0.66
ATL3-201ENST00000398868 VEZTQ9HBM0 779 aa10.92□□□□□ -0.66
ATL3-201ENST00000398868 SEC63Q9UGP8 760 aaKnown RBP10.92□□□□□ -0.66
ATL3-201ENST00000398868 CSPG5O95196 566 aa10.92□□□□□ -0.66
ATL3-201ENST00000398868 UBE2Q2Q8WVN8 375 aa10.92□□□□□ -0.66
ATL3-201ENST00000398868 ERLIN2O94905 339 aa10.92□□□□□ -0.66
ATL3-201ENST00000398868 NBPF8Q3BBV2 869 aa10.92□□□□□ -0.66
ATL3-201ENST00000398868 PPFIBP1Q86W92 1011 aa10.92□□□□□ -0.66
ATL3-201ENST00000398868 TRMT1Q9NXH9 659 aaKnown RBP10.92□□□□□ -0.66
ATL3-201ENST00000398868 ZNF652Q9Y2D9 606 aa10.92□□□□□ -0.66
ATL3-201ENST00000398868 GJA3Q9Y6H8 435 aa10.92□□□□□ -0.66
ATL3-201ENST00000398868 AKNAD1Q5T1N1 836 aa10.92□□□□□ -0.66
ATL3-201ENST00000398868 DPH6Q7L8W6 267 aa10.92□□□□□ -0.66
ATL3-201ENST00000398868 PDRG1Q9NUG6 133 aa10.92□□□□□ -0.66
ATL3-201ENST00000398868 SP4Q02446 784 aa10.92□□□□□ -0.66
ATL3-201ENST00000398868 ZNF444Q8N0Y2 327 aaPredicted RBP10.92□□□□□ -0.66
ATL3-201ENST00000398868 UIMC1Q96RL1 719 aa10.92□□□□□ -0.66
ATL3-201ENST00000398868 CCDC192P0DO97 292 aa10.91□□□□□ -0.66
ATL3-201ENST00000398868 USP8P40818 1118 aa10.91□□□□□ -0.66
ATL3-201ENST00000398868 CCDC83Q8IWF9 413 aa10.91□□□□□ -0.66
ATL3-201ENST00000398868 TMEM57Q8N5G2 664 aa10.91□□□□□ -0.66
ATL3-201ENST00000398868 BIN2Q9UBW5 565 aaPredicted RBP10.91□□□□□ -0.66
ATL3-201ENST00000398868 FGD6Q6ZV73 1430 aa10.91□□□□□ -0.66
ATL3-201ENST00000398868 IFIT1P09914 478 aaKnown RBP10.91□□□□□ -0.66
ATL3-201ENST00000398868 INCENPQ9NQS7 918 aa10.91□□□□□ -0.66
ATL3-201ENST00000398868 NCOA2Q15596 1464 aa10.91□□□□□ -0.66
ATL3-201ENST00000398868 ATP6V1AP38606 617 aa10.91□□□□□ -0.66
ATL3-201ENST00000398868 UPF3BQ9BZI7 483 aaKnown RBP10.91□□□□□ -0.66
ATL3-201ENST00000398868 PUF60Q9UHX1 559 aaKnown RBP10.91□□□□□ -0.66
ATL3-201ENST00000398868 CCP110O43303 1012 aa10.9□□□□□ -0.66
ATL3-201ENST00000398868 IGSF3O75054 1194 aa10.9□□□□□ -0.66
ATL3-201ENST00000398868 IFIT5Q13325 482 aaKnown RBP10.9□□□□□ -0.66
ATL3-201ENST00000398868 PRPF40BQ6NWY9 871 aaKnown RBP10.9□□□□□ -0.66
ATL3-201ENST00000398868 DRC1Q96MC2 740 aa10.9□□□□□ -0.66
ATL3-201ENST00000398868 SNAPC4Q5SXM2 1469 aa10.9□□□□□ -0.66
ATL3-201ENST00000398868 MBD3O95983 291 aa10.9□□□□□ -0.66
ATL3-201ENST00000398868 MAP2K1Q02750 393 aaPredicted RBP10.9□□□□□ -0.66
ATL3-201ENST00000398868 DDX17Q92841 729 aaKnown RBP10.9□□□□□ -0.66
ATL3-201ENST00000398868 RRBP1Q9P2E9 1410 aaKnown RBP10.9□□□□□ -0.66
ATL3-201ENST00000398868 NAPBQ9H115 298 aa10.9□□□□□ -0.67
ATL3-201ENST00000398868 ATP2C2O75185 946 aa10.89□□□□□ -0.67
ATL3-201ENST00000398868 ERLIN1O75477 346 aa10.89□□□□□ -0.67
ATL3-201ENST00000398868 BLOC1S2Q6QNY1 142 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms