RNA–Protein interactions for RNA: ENST00000398788.4

CDH23-203, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-203ENST00000398788 BMS1Q14692 1282 aaKnown RBP11.01□□□□□ -0.65
CDH23-203ENST00000398788 DNAJC5Q9H3Z4 198 aa11.01□□□□□ -0.65
CDH23-203ENST00000398788 TRMT1Q9NXH9 659 aaKnown RBP11.01□□□□□ -0.65
CDH23-203ENST00000398788 KIF14Q15058 1648 aa11.01□□□□□ -0.65
CDH23-203ENST00000398788 DHX29Q7Z478 1369 aaKnown RBP11.01□□□□□ -0.65
CDH23-203ENST00000398788 GNAI3P08754 354 aa11.01□□□□□ -0.65
CDH23-203ENST00000398788 PLEKHO1Q53GL0 409 aaPredicted RBP11.01□□□□□ -0.65
CDH23-203ENST00000398788 HSP90AB4PQ58FF6 505 aa11.01□□□□□ -0.65
CDH23-203ENST00000398788 CCDC30Q5VVM6 783 aa11.01□□□□□ -0.65
CDH23-203ENST00000398788 LRRFIP2Q9Y608 721 aaKnown RBP11.01□□□□□ -0.65
CDH23-203ENST00000398788 MYL6BP14649 208 aa11□□□□□ -0.65
CDH23-203ENST00000398788 CEBPZQ03701 1054 aaKnown RBP11□□□□□ -0.65
CDH23-203ENST00000398788 LRRFIP1Q32MZ4 808 aaKnown RBP11□□□□□ -0.65
CDH23-203ENST00000398788 TMCO3Q6UWJ1 677 aa11□□□□□ -0.65
CDH23-203ENST00000398788 CHAMP1Q96JM3 812 aa11□□□□□ -0.65
CDH23-203ENST00000398788 CCDC85AQ96PX6 553 aaPredicted RBP11□□□□□ -0.65
CDH23-203ENST00000398788 ATF7IPQ6VMQ6 1270 aa11□□□□□ -0.65
CDH23-203ENST00000398788 NEK11Q8NG66 645 aa11□□□□□ -0.65
CDH23-203ENST00000398788 PHF23Q9BUL5 403 aaPredicted RBP11□□□□□ -0.65
CDH23-203ENST00000398788 AMOTL2Q9Y2J4 779 aa11□□□□□ -0.65
CDH23-203ENST00000398788 TERF2Q15554 542 aa11□□□□□ -0.65
CDH23-203ENST00000398788 ZNF530Q6P9A1 599 aaPredicted RBP11□□□□□ -0.65
CDH23-203ENST00000398788 CTR9Q6PD62 1173 aa11□□□□□ -0.65
CDH23-203ENST00000398788 FMNL2Q96PY5 1086 aa11□□□□□ -0.65
CDH23-203ENST00000398788 TOM1L2Q6ZVM7 507 aa11□□□□□ -0.65
CDH23-203ENST00000398788 ZNF397Q8NF99 534 aaPredicted RBP11□□□□□ -0.65
CDH23-203ENST00000398788 SNX21Q969T3 373 aa11□□□□□ -0.65
CDH23-203ENST00000398788 TMEM63CQ9P1W3 806 aa11□□□□□ -0.65
CDH23-203ENST00000398788 HNRNPH2P55795 449 aaKnown RBP10.99□□□□□ -0.65
CDH23-203ENST00000398788 PTPN14Q15678 1187 aa10.99□□□□□ -0.65
CDH23-203ENST00000398788 TXLNBQ8N3L3 684 aa10.99□□□□□ -0.65
CDH23-203ENST00000398788 TNNQ9UQP3 1299 aa10.99□□□□□ -0.65
CDH23-203ENST00000398788 TTC31Q49AM3 519 aaPredicted RBP10.99□□□□□ -0.65
CDH23-203ENST00000398788 TATP17735 454 aaPredicted RBP10.99□□□□□ -0.65
CDH23-203ENST00000398788 SDF4Q9BRK5 362 aa10.99□□□□□ -0.65
CDH23-203ENST00000398788 ATAD2Q6PL18 1390 aa10.99□□□□□ -0.65
CDH23-203ENST00000398788 H0YHG0 523 aa10.98□□□□□ -0.65
CDH23-203ENST00000398788 MNAT1P51948 309 aa10.98□□□□□ -0.65
CDH23-203ENST00000398788 FILIP1Q7Z7B0 1213 aa10.98□□□□□ -0.65
CDH23-203ENST00000398788 PCMTD1Q96MG8 357 aaPredicted RBP10.98□□□□□ -0.65
CDH23-203ENST00000398788 LMBRD1Q9NUN5 540 aa10.98□□□□□ -0.65
CDH23-203ENST00000398788 NINLQ9Y2I6 1382 aa10.98□□□□□ -0.65
CDH23-203ENST00000398788 FBLN1P23142 703 aa10.98□□□□□ -0.65
CDH23-203ENST00000398788 RRP12Q5JTH9 1297 aaKnown RBP10.98□□□□□ -0.65
CDH23-203ENST00000398788 ZNF622Q969S3 477 aaKnown RBP eCLIP10.98□□□□□ -0.65
CDH23-203ENST00000398788 WDR7Q9Y4E6 1490 aa10.98□□□□□ -0.65
CDH23-203ENST00000398788 GNAI2P04899 355 aa10.98□□□□□ -0.65
CDH23-203ENST00000398788 STK3Q13188 491 aa10.98□□□□□ -0.65
CDH23-203ENST00000398788 TSR1Q2NL82 804 aaKnown RBP10.98□□□□□ -0.65
CDH23-203ENST00000398788 CEP135Q66GS9 1140 aa10.98□□□□□ -0.65
CDH23-203ENST00000398788 EXOC6BQ9Y2D4 811 aa10.98□□□□□ -0.65
CDH23-203ENST00000398788 ADGRF5Q8IZF2 1346 aa10.97□□□□□ -0.65
CDH23-203ENST00000398788 FOXO3O43524 673 aa10.97□□□□□ -0.65
CDH23-203ENST00000398788 MVPQ14764 893 aaKnown RBP10.97□□□□□ -0.65
CDH23-203ENST00000398788 MCM10Q7L590 875 aa10.97□□□□□ -0.65
CDH23-203ENST00000398788 UBXN4Q92575 508 aa10.97□□□□□ -0.65
CDH23-203ENST00000398788 PLCH2O75038 1416 aa10.97□□□□□ -0.65
CDH23-203ENST00000398788 GPATCH8Q9UKJ3 1502 aaKnown RBP10.97□□□□□ -0.65
CDH23-203ENST00000398788 PTGS1P23219 599 aa10.97□□□□□ -0.65
CDH23-203ENST00000398788 RDXP35241 583 aaKnown RBP10.97□□□□□ -0.65
CDH23-203ENST00000398788 CCDC186Q7Z3E2 898 aa10.97□□□□□ -0.65
CDH23-203ENST00000398788 ZGPATQ8N5A5 531 aaKnown RBP10.97□□□□□ -0.65
CDH23-203ENST00000398788 NAA30Q147X3 362 aaPredicted RBP10.96□□□□□ -0.65
CDH23-203ENST00000398788 E2F4Q16254 413 aa10.96□□□□□ -0.65
CDH23-203ENST00000398788 CT47A1Q5JQC4 288 aaPredicted RBP10.96□□□□□ -0.65
CDH23-203ENST00000398788 CCDC73Q6ZRK6 1079 aa10.96□□□□□ -0.65
CDH23-203ENST00000398788 CNTROBQ8N137 903 aa10.96□□□□□ -0.65
CDH23-203ENST00000398788 GIMAP7Q8NHV1 300 aa10.96□□□□□ -0.65
CDH23-203ENST00000398788 EFCC1Q9HA90 598 aa10.96□□□□□ -0.65
CDH23-203ENST00000398788 SMTNL1A8MU46 457 aa10.96□□□□□ -0.65
CDH23-203ENST00000398788 TMEM57Q8N5G2 664 aa10.96□□□□□ -0.65
CDH23-203ENST00000398788 CEP89Q96ST8 783 aa10.96□□□□□ -0.65
CDH23-203ENST00000398788 PAXBP1Q9Y5B6 917 aa10.96□□□□□ -0.65
CDH23-203ENST00000398788 DMRT2Q9Y5R5 561 aa10.96□□□□□ -0.65
CDH23-203ENST00000398788 ERICH2A1L162 156 aa10.96□□□□□ -0.66
CDH23-203ENST00000398788 CCDC192P0DO97 292 aa10.96□□□□□ -0.66
CDH23-203ENST00000398788 TMPOP42166 694 aaKnown RBP10.96□□□□□ -0.66
CDH23-203ENST00000398788 HSP90B2PQ58FF3 399 aa10.96□□□□□ -0.66
CDH23-203ENST00000398788 CHD1LQ86WJ1 897 aa10.96□□□□□ -0.66
CDH23-203ENST00000398788 ELF2Q15723 593 aa10.95□□□□□ -0.66
CDH23-203ENST00000398788 SRGAP3O43295 1099 aa10.95□□□□□ -0.66
CDH23-203ENST00000398788 PKP1Q13835 747 aa10.95□□□□□ -0.66
CDH23-203ENST00000398788 GIMAP6Q6P9H5 292 aa10.95□□□□□ -0.66
CDH23-203ENST00000398788 FAM177A1Q8N128 213 aaPredicted RBP10.95□□□□□ -0.66
CDH23-203ENST00000398788 KIF18AQ8NI77 898 aa10.95□□□□□ -0.66
CDH23-203ENST00000398788 DNAAF4Q8WXU2 420 aa10.95□□□□□ -0.66
CDH23-203ENST00000398788 RAD51AP2Q09MP3 1159 aa10.95□□□□□ -0.66
CDH23-203ENST00000398788 SRCIN1Q9C0H9 1055 aa10.95□□□□□ -0.66
CDH23-203ENST00000398788 A0A1B0GUL7 405 aa10.95□□□□□ -0.66
CDH23-203ENST00000398788 EP400NLQ6ZTU2 488 aa10.95□□□□□ -0.66
CDH23-203ENST00000398788 PTCD1O75127 700 aaKnown RBP10.94□□□□□ -0.66
CDH23-203ENST00000398788 SART3Q15020 963 aaKnown RBP10.94□□□□□ -0.66
CDH23-203ENST00000398788 CCDC183Q5T5S1 534 aa10.94□□□□□ -0.66
CDH23-203ENST00000398788 AMOTL1Q8IY63 956 aa10.94□□□□□ -0.66
CDH23-203ENST00000398788 USHBP1Q8N6Y0 703 aa10.94□□□□□ -0.66
CDH23-203ENST00000398788 PDLIM2Q96JY6 352 aa10.94□□□□□ -0.66
CDH23-203ENST00000398788 ABCC10Q5T3U5 1492 aa10.94□□□□□ -0.66
CDH23-203ENST00000398788 GOLIM4O00461 696 aa10.94□□□□□ -0.66
CDH23-203ENST00000398788 CAMK4Q16566 473 aa10.94□□□□□ -0.66
CDH23-203ENST00000398788 UVSSAQ2YD98 709 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms