RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 NACAP1Q9BZK3 213 aa13.72□□□□□ -0.21
PCDHGA8-201ENST00000398604 HECW2Q9P2P5 1572 aa13.72□□□□□ -0.21
PCDHGA8-201ENST00000398604 TDO2P48775 406 aa13.72□□□□□ -0.21
PCDHGA8-201ENST00000398604 LRPPRCP42704 1394 aaKnown RBP13.72□□□□□ -0.21
PCDHGA8-201ENST00000398604 BCORL1Q5H9F3 1711 aa13.72□□□□□ -0.21
PCDHGA8-201ENST00000398604 YEATS2Q9ULM3 1422 aa13.72□□□□□ -0.21
PCDHGA8-201ENST00000398604 KRT18P05783 430 aaKnown RBP13.72□□□□□ -0.21
PCDHGA8-201ENST00000398604 NASPP49321 788 aaPredicted RBP13.72□□□□□ -0.21
PCDHGA8-201ENST00000398604 CADPS2Q86UW7 1296 aa13.72□□□□□ -0.21
PCDHGA8-201ENST00000398604 SSH1Q8WYL5 1049 aa13.72□□□□□ -0.21
PCDHGA8-201ENST00000398604 NGLY1Q96IV0 654 aa13.72□□□□□ -0.21
PCDHGA8-201ENST00000398604 ME1P48163 572 aa13.71□□□□□ -0.21
PCDHGA8-201ENST00000398604 RABEP1Q15276 862 aa13.71□□□□□ -0.21
PCDHGA8-201ENST00000398604 TAF7Q15545 349 aaPredicted RBP13.71□□□□□ -0.21
PCDHGA8-201ENST00000398604 ODF2Q5BJF6 829 aa13.71□□□□□ -0.21
PCDHGA8-201ENST00000398604 CDK5RAP3Q96JB5 506 aa13.71□□□□□ -0.21
PCDHGA8-201ENST00000398604 NSD3Q9BZ95 1437 aa13.71□□□□□ -0.21
PCDHGA8-201ENST00000398604 CHRNA2Q15822 529 aa13.71□□□□□ -0.21
PCDHGA8-201ENST00000398604 PHF8Q9UPP1 1060 aa13.71□□□□□ -0.21
PCDHGA8-201ENST00000398604 BLOC1S2Q6QNY1 142 aa13.71□□□□□ -0.21
PCDHGA8-201ENST00000398604 DDX11Q96FC9 970 aa13.71□□□□□ -0.21
PCDHGA8-201ENST00000398604 KDM5CP41229 1560 aa13.71□□□□□ -0.22
PCDHGA8-201ENST00000398604 DCAF8L1A6NGE4 600 aa13.71□□□□□ -0.22
PCDHGA8-201ENST00000398604 HIP1O00291 1037 aa13.71□□□□□ -0.22
PCDHGA8-201ENST00000398604 SSBP05455 408 aaKnown RBP eCLIP13.71□□□□□ -0.22
PCDHGA8-201ENST00000398604 LARP1BQ659C4 914 aaKnown RBP13.71□□□□□ -0.22
PCDHGA8-201ENST00000398604 CCDC82Q8N4S0 544 aa13.71□□□□□ -0.22
PCDHGA8-201ENST00000398604 BOLA2Q9H3K6 86 aa13.71□□□□□ -0.22
PCDHGA8-201ENST00000398604 RIMBP3CA6NJZ7 1639 aa13.7□□□□□ -0.22
PCDHGA8-201ENST00000398604 RIMBP3BA6NNM3 1639 aa13.7□□□□□ -0.22
PCDHGA8-201ENST00000398604 RIMBP3Q9UFD9 1639 aa13.7□□□□□ -0.22
PCDHGA8-201ENST00000398604 SMC2O95347 1197 aa13.7□□□□□ -0.22
PCDHGA8-201ENST00000398604 FERMT3Q86UX7 667 aa13.7□□□□□ -0.22
PCDHGA8-201ENST00000398604 KCNH5Q8NCM2 988 aa13.7□□□□□ -0.22
PCDHGA8-201ENST00000398604 JAKMIP1Q96N16 626 aaKnown RBP13.7□□□□□ -0.22
PCDHGA8-201ENST00000398604 ANXA1P04083 346 aa13.7□□□□□ -0.22
PCDHGA8-201ENST00000398604 GPTP24298 496 aa13.7□□□□□ -0.22
PCDHGA8-201ENST00000398604 TESK2Q96S53 571 aa13.7□□□□□ -0.22
PCDHGA8-201ENST00000398604 METTL24Q5JXM2 366 aa13.7□□□□□ -0.22
PCDHGA8-201ENST00000398604 SPC24Q8NBT2 197 aa13.7□□□□□ -0.22
PCDHGA8-201ENST00000398604 STARD3NLO95772 234 aa13.7□□□□□ -0.22
PCDHGA8-201ENST00000398604 IBSPP21815 317 aaPredicted RBP13.7□□□□□ -0.22
PCDHGA8-201ENST00000398604 ABCA9Q8IUA7 1624 aa13.69□□□□□ -0.22
PCDHGA8-201ENST00000398604 TRIM22Q8IYM9 498 aa13.69□□□□□ -0.22
PCDHGA8-201ENST00000398604 FAM43AQ8N2R8 423 aa13.69□□□□□ -0.22
PCDHGA8-201ENST00000398604 MNS1Q8NEH6 495 aa13.69□□□□□ -0.22
PCDHGA8-201ENST00000398604 JARID2Q92833 1246 aaPredicted RBP13.69□□□□□ -0.22
PCDHGA8-201ENST00000398604 ZBTB3Q9H5J0 574 aa13.69□□□□□ -0.22
PCDHGA8-201ENST00000398604 MYD88Q99836 296 aa13.68□□□□□ -0.22
PCDHGA8-201ENST00000398604 CCDC8Q9H0W5 538 aaPredicted RBP13.68□□□□□ -0.22
PCDHGA8-201ENST00000398604 TMOD3Q9NYL9 352 aa13.68□□□□□ -0.22
PCDHGA8-201ENST00000398604 CDC42BPBQ9Y5S2 1711 aa13.68□□□□□ -0.22
PCDHGA8-201ENST00000398604 RSPH6AQ9H0K4 717 aa13.68□□□□□ -0.22
PCDHGA8-201ENST00000398604 PLA2R1Q13018 1463 aa13.68□□□□□ -0.22
PCDHGA8-201ENST00000398604 KDM5DQ9BY66 1539 aa13.68□□□□□ -0.22
PCDHGA8-201ENST00000398604 MINDY4BA8MYZ0 360 aa13.68□□□□□ -0.22
PCDHGA8-201ENST00000398604 CCDC69A6NI79 296 aa13.67□□□□□ -0.22
PCDHGA8-201ENST00000398604 PER1O15534 1290 aaPredicted RBP13.67□□□□□ -0.22
PCDHGA8-201ENST00000398604 IGHMBP2P38935 993 aaKnown RBP13.67□□□□□ -0.22
PCDHGA8-201ENST00000398604 USP5P45974 858 aa13.67□□□□□ -0.22
PCDHGA8-201ENST00000398604 PAF1Q8N7H5 531 aa13.67□□□□□ -0.22
PCDHGA8-201ENST00000398604 NAT10Q9H0A0 1025 aaKnown RBP13.67□□□□□ -0.22
PCDHGA8-201ENST00000398604 SKIDA1Q1XH10 827 aa13.67□□□□□ -0.22
PCDHGA8-201ENST00000398604 UBAC1Q9BSL1 405 aa13.67□□□□□ -0.22
PCDHGA8-201ENST00000398604 FAM83GA6ND36 823 aa13.66□□□□□ -0.22
PCDHGA8-201ENST00000398604 TXLNAP40222 546 aa13.66□□□□□ -0.22
PCDHGA8-201ENST00000398604 MCM2P49736 904 aa13.66□□□□□ -0.22
PCDHGA8-201ENST00000398604 LARP6Q9BRS8 491 aaKnown RBP13.66□□□□□ -0.22
PCDHGA8-201ENST00000398604 NSD2O96028 1365 aa13.66□□□□□ -0.22
PCDHGA8-201ENST00000398604 ATP5J2-PTCD1G3V325 749 aa13.66□□□□□ -0.22
PCDHGA8-201ENST00000398604 RPAP2Q8IXW5 612 aaPredicted RBP13.66□□□□□ -0.22
PCDHGA8-201ENST00000398604 MSH6P52701 1360 aa13.66□□□□□ -0.22
PCDHGA8-201ENST00000398604 GPS2Q13227 327 aa13.65□□□□□ -0.22
PCDHGA8-201ENST00000398604 AIDAQ96BJ3 306 aa13.65□□□□□ -0.22
PCDHGA8-201ENST00000398604 PPFIA3O75145 1194 aa13.65□□□□□ -0.22
PCDHGA8-201ENST00000398604 SOGA3Q5TF21 947 aa13.65□□□□□ -0.22
PCDHGA8-201ENST00000398604 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.65□□□□□ -0.22
PCDHGA8-201ENST00000398604 PLXNC1O60486 1568 aa13.64□□□□□ -0.23
PCDHGA8-201ENST00000398604 MBD3O95983 291 aa13.64□□□□□ -0.23
PCDHGA8-201ENST00000398604 TRMT112Q9UI30 125 aaKnown RBP13.64□□□□□ -0.23
PCDHGA8-201ENST00000398604 NPATQ14207 1427 aa13.64□□□□□ -0.23
PCDHGA8-201ENST00000398604 TSPOAP1O95153 1857 aa13.64□□□□□ -0.23
PCDHGA8-201ENST00000398604 ZPR1O75312 459 aa13.64□□□□□ -0.23
PCDHGA8-201ENST00000398604 SNRKQ9NRH2 765 aa13.64□□□□□ -0.23
PCDHGA8-201ENST00000398604 WWC3Q9ULE0 1092 aa13.64□□□□□ -0.23
PCDHGA8-201ENST00000398604 A0A087WZG4 1122 aa13.64□□□□□ -0.23
PCDHGA8-201ENST00000398604 CHMP4BP1P59074 171 aa13.64□□□□□ -0.23
PCDHGA8-201ENST00000398604 PDRG1Q9NUG6 133 aa13.64□□□□□ -0.23
PCDHGA8-201ENST00000398604 MRE11P49959 708 aa13.63□□□□□ -0.23
PCDHGA8-201ENST00000398604 FAM177A1Q8N128 213 aaPredicted RBP13.63□□□□□ -0.23
PCDHGA8-201ENST00000398604 ZNF396Q96N95 335 aaPredicted RBP13.63□□□□□ -0.23
PCDHGA8-201ENST00000398604 LARP1Q6PKG0 1096 aaKnown RBP13.63□□□□□ -0.23
PCDHGA8-201ENST00000398604 KRI1Q8N9T8 703 aaKnown RBP13.63□□□□□ -0.23
PCDHGA8-201ENST00000398604 RARSP54136 660 aaKnown RBP13.63□□□□□ -0.23
PCDHGA8-201ENST00000398604 TRMT1LQ7Z2T5 733 aaKnown RBP13.63□□□□□ -0.23
PCDHGA8-201ENST00000398604 ANKIB1Q9P2G1 1089 aa13.63□□□□□ -0.23
PCDHGA8-201ENST00000398604 K7ELQ4 463 aaPredicted RBP13.62□□□□□ -0.23
PCDHGA8-201ENST00000398604 SERPINC1P01008 464 aa13.62□□□□□ -0.23
PCDHGA8-201ENST00000398604 KRT85P78386 507 aa13.62□□□□□ -0.23
PCDHGA8-201ENST00000398604 KRT28Q7Z3Y7 464 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms