RNA–Protein interactions for RNA: ENST00000398367.1

UBASH3A-203, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 1 (best) BASIC

Gene UBASH3A, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-203ENST00000398367 PIP4K2BP78356 416 aa18.62■□□□□ 0.57
UBASH3A-203ENST00000398367 CCDC30Q5VVM6 783 aa18.62■□□□□ 0.57
UBASH3A-203ENST00000398367 LARP1Q6PKG0 1096 aaKnown RBP18.62■□□□□ 0.57
UBASH3A-203ENST00000398367 TMEM57Q8N5G2 664 aa18.62■□□□□ 0.57
UBASH3A-203ENST00000398367 DCAF5Q96JK2 942 aa18.62■□□□□ 0.57
UBASH3A-203ENST00000398367 PCDH11XQ9BZA7 1347 aa18.61■□□□□ 0.57
UBASH3A-203ENST00000398367 PCDH11YQ9BZA8 1340 aa18.61■□□□□ 0.57
UBASH3A-203ENST00000398367 TCERG1O14776 1098 aaKnown RBP18.61■□□□□ 0.57
UBASH3A-203ENST00000398367 STK31Q9BXU1 1019 aa18.61■□□□□ 0.57
UBASH3A-203ENST00000398367 BTG4Q9NY30 223 aa18.61■□□□□ 0.57
UBASH3A-203ENST00000398367 EIF4A1P60842 406 aaKnown RBP18.6■□□□□ 0.57
UBASH3A-203ENST00000398367 KDM3BQ7LBC6 1761 aa18.6■□□□□ 0.57
UBASH3A-203ENST00000398367 KDM6AO15550 1401 aaPredicted RBP18.6■□□□□ 0.57
UBASH3A-203ENST00000398367 ZCRB1Q8TBF4 217 aaKnown RBP18.6■□□□□ 0.57
UBASH3A-203ENST00000398367 CYP27B1O15528 508 aa18.59■□□□□ 0.57
UBASH3A-203ENST00000398367 SLC4A2P04920 1241 aa18.59■□□□□ 0.57
UBASH3A-203ENST00000398367 SLC52A2Q9HAB3 445 aa18.59■□□□□ 0.57
UBASH3A-203ENST00000398367 MRC1P22897 1456 aa18.59■□□□□ 0.57
UBASH3A-203ENST00000398367 HDGFL1Q5TGJ6 251 aa18.56■□□□□ 0.56
UBASH3A-203ENST00000398367 SIPA1L3O60292 1781 aaPredicted RBP18.56■□□□□ 0.56
UBASH3A-203ENST00000398367 ZBTB40Q9NUA8 1239 aa18.55■□□□□ 0.56
UBASH3A-203ENST00000398367 RGS12O14924 1447 aa18.55■□□□□ 0.56
UBASH3A-203ENST00000398367 HEG1Q9ULI3 1381 aa18.55■□□□□ 0.56
UBASH3A-203ENST00000398367 SCN11AQ9UI33 1791 aa18.55■□□□□ 0.56
UBASH3A-203ENST00000398367 RWDD1Q9H446 243 aaPredicted RBP18.54■□□□□ 0.56
UBASH3A-203ENST00000398367 NKX1-1Q15270 411 aaPredicted RBP18.54■□□□□ 0.56
UBASH3A-203ENST00000398367 INTS3Q68E01 1043 aaKnown RBP18.54■□□□□ 0.56
UBASH3A-203ENST00000398367 PCDHB15Q9Y5E8 787 aa18.54■□□□□ 0.56
UBASH3A-203ENST00000398367 KCNQ3O43525 872 aa18.53■□□□□ 0.56
UBASH3A-203ENST00000398367 ZNF790Q6PG37 636 aa18.52■□□□□ 0.56
UBASH3A-203ENST00000398367 NFATC2IPQ8NCF5 419 aa18.52■□□□□ 0.56
UBASH3A-203ENST00000398367 DISP2A7MBM2 1401 aa18.52■□□□□ 0.55
UBASH3A-203ENST00000398367 ERVV-2B6SEH9 535 aa18.52■□□□□ 0.55
UBASH3A-203ENST00000398367 ZBTB7BO15156 539 aaPredicted RBP18.52■□□□□ 0.55
UBASH3A-203ENST00000398367 IGHDP01880 384 aa18.52■□□□□ 0.55
UBASH3A-203ENST00000398367 CABP4P57796 275 aa18.52■□□□□ 0.55
UBASH3A-203ENST00000398367 FLIIQ13045 1269 aa18.52■□□□□ 0.55
UBASH3A-203ENST00000398367 CERKQ8TCT0 537 aa18.52■□□□□ 0.55
UBASH3A-203ENST00000398367 TSHZ2Q9NRE2 1034 aa18.52■□□□□ 0.55
UBASH3A-203ENST00000398367 JCADQ9P266 1359 aa18.51■□□□□ 0.55
UBASH3A-203ENST00000398367 PLCH1Q4KWH8 1693 aa18.51■□□□□ 0.55
UBASH3A-203ENST00000398367 GIGYF1O75420 1035 aaPredicted RBP18.51■□□□□ 0.55
UBASH3A-203ENST00000398367 ADAMTS2O95450 1211 aa18.51■□□□□ 0.55
UBASH3A-203ENST00000398367 VIRMAQ69YN4 1812 aaKnown RBP18.5■□□□□ 0.55
UBASH3A-203ENST00000398367 HDAC1Q13547 482 aaPredicted RBP18.5■□□□□ 0.55
UBASH3A-203ENST00000398367 TTC5Q8N0Z6 440 aa18.5■□□□□ 0.55
UBASH3A-203ENST00000398367 USP35Q9P2H5 1018 aa18.5■□□□□ 0.55
UBASH3A-203ENST00000398367 CCT4P50991 539 aaKnown RBP18.49■□□□□ 0.55
UBASH3A-203ENST00000398367 G2E3Q7L622 706 aa18.49■□□□□ 0.55
UBASH3A-203ENST00000398367 NECTIN2Q92692 538 aa18.49■□□□□ 0.55
UBASH3A-203ENST00000398367 CDCA7Q9BWT1 371 aaPredicted RBP18.49■□□□□ 0.55
UBASH3A-203ENST00000398367 EIF2S2P20042 333 aaKnown RBP18.49■□□□□ 0.55
UBASH3A-203ENST00000398367 THRAP3Q9Y2W1 955 aaKnown RBP18.49■□□□□ 0.55
UBASH3A-203ENST00000398367 NUTM2BA6NNL0 878 aaPredicted RBP18.48■□□□□ 0.55
UBASH3A-203ENST00000398367 NUTM2EB1AL46 878 aaPredicted RBP18.48■□□□□ 0.55
UBASH3A-203ENST00000398367 FKBP5Q13451 457 aaPredicted RBP18.48■□□□□ 0.55
UBASH3A-203ENST00000398367 NUTM2AQ8IVF1 878 aaPredicted RBP18.48■□□□□ 0.55
UBASH3A-203ENST00000398367 DDX54Q8TDD1 881 aaKnown RBP18.48■□□□□ 0.55
UBASH3A-203ENST00000398367 DBF4Q9UBU7 674 aaPredicted RBP18.48■□□□□ 0.55
UBASH3A-203ENST00000398367 PXDNLA1KZ92 1463 aa18.48■□□□□ 0.55
UBASH3A-203ENST00000398367 SLIT2O94813 1529 aa18.47■□□□□ 0.55
UBASH3A-203ENST00000398367 NRAPQ86VF7 1730 aa18.47■□□□□ 0.55
UBASH3A-203ENST00000398367 FMNL2Q96PY5 1086 aa18.46■□□□□ 0.55
UBASH3A-203ENST00000398367 SHANK3Q9BYB0 1731 aa18.46■□□□□ 0.55
UBASH3A-203ENST00000398367 SLC39A6Q13433 755 aa18.46■□□□□ 0.55
UBASH3A-203ENST00000398367 CHPF2Q9P2E5 772 aa18.46■□□□□ 0.55
UBASH3A-203ENST00000398367 SPATA31A1Q5TZJ5 1347 aa18.45■□□□□ 0.54
UBASH3A-203ENST00000398367 NWD2Q9ULI1 1742 aa18.45■□□□□ 0.54
UBASH3A-203ENST00000398367 SPATA31A6Q5VVP1 1343 aa18.44■□□□□ 0.54
UBASH3A-203ENST00000398367 SNRPA1P09661 255 aaKnown RBP18.44■□□□□ 0.54
UBASH3A-203ENST00000398367 ZNF496Q96IT1 587 aaPredicted RBP18.43■□□□□ 0.54
UBASH3A-203ENST00000398367 F6X3S4 739 aa18.43■□□□□ 0.54
UBASH3A-203ENST00000398367 EXOC5O00471 708 aa18.43■□□□□ 0.54
UBASH3A-203ENST00000398367 SLC4A10Q6U841 1118 aa18.43■□□□□ 0.54
UBASH3A-203ENST00000398367 HYPKQ9NX55 129 aa18.43■□□□□ 0.54
UBASH3A-203ENST00000398367 TNS2Q63HR2 1409 aa18.42■□□□□ 0.54
UBASH3A-203ENST00000398367 CACNA1FO60840 1977 aa18.42■□□□□ 0.54
UBASH3A-203ENST00000398367 PHAXQ9H814 394 aaKnown RBP18.42■□□□□ 0.54
UBASH3A-203ENST00000398367 SPATA31A5Q5VU36 1347 aa18.41■□□□□ 0.54
UBASH3A-203ENST00000398367 SPATA31A7Q8IWB4 1347 aa18.41■□□□□ 0.54
UBASH3A-203ENST00000398367 DDX21Q9NR30 783 aaKnown RBP eCLIP18.41■□□□□ 0.54
UBASH3A-203ENST00000398367 LRP6O75581 1613 aa18.41■□□□□ 0.54
UBASH3A-203ENST00000398367 WNK3Q9BYP7 1800 aa18.4■□□□□ 0.54
UBASH3A-203ENST00000398367 PRAMEF22A3QJZ6 481 aa18.4■□□□□ 0.54
UBASH3A-203ENST00000398367 BARGINQ6ZT62 677 aa18.4■□□□□ 0.54
UBASH3A-203ENST00000398367 UNC5CLQ8IV45 518 aa18.4■□□□□ 0.54
UBASH3A-203ENST00000398367 SMC5Q8IY18 1101 aa18.4■□□□□ 0.54
UBASH3A-203ENST00000398367 TMOD3Q9NYL9 352 aa18.4■□□□□ 0.54
UBASH3A-203ENST00000398367 PAPPAQ13219 1627 aa18.39■□□□□ 0.53
UBASH3A-203ENST00000398367 RPAP2Q8IXW5 612 aaPredicted RBP18.39■□□□□ 0.53
UBASH3A-203ENST00000398367 GNAI3P08754 354 aa18.38■□□□□ 0.53
UBASH3A-203ENST00000398367 GCC1Q96CN9 775 aa18.38■□□□□ 0.53
UBASH3A-203ENST00000398367 C1orf115Q9H7X2 142 aa18.38■□□□□ 0.53
UBASH3A-203ENST00000398367 ERBB4Q15303 1308 aa18.38■□□□□ 0.53
UBASH3A-203ENST00000398367 ATP10DQ9P241 1426 aa18.38■□□□□ 0.53
UBASH3A-203ENST00000398367 DDX58O95786 925 aaKnown RBP18.37■□□□□ 0.53
UBASH3A-203ENST00000398367 DNAAF4Q8WXU2 420 aa18.37■□□□□ 0.53
UBASH3A-203ENST00000398367 MEIS3Q99687 375 aa18.37■□□□□ 0.53
UBASH3A-203ENST00000398367 N4BP2Q86UW6 1770 aaPredicted RBP18.37■□□□□ 0.53
UBASH3A-203ENST00000398367 NGLY1Q96IV0 654 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms