RNA–Protein interactions for RNA: ENST00000397898.7

SUMO3-203, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 3 BASIC

Gene SUMO3, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-203ENST00000397898 DOT1LQ8TEK3 1739 aa19.81■□□□□ 0.76
SUMO3-203ENST00000397898 PRIM1P49642 420 aaKnown RBP19.8■□□□□ 0.76
SUMO3-203ENST00000397898 SYTL4Q96C24 671 aaPredicted RBP19.8■□□□□ 0.76
SUMO3-203ENST00000397898 EP400Q96L91 3159 aa19.8■□□□□ 0.76
SUMO3-203ENST00000397898 ZNF853P0CG23 659 aa19.8■□□□□ 0.76
SUMO3-203ENST00000397898 GNAI1P63096 354 aa19.8■□□□□ 0.76
SUMO3-203ENST00000397898 FAM196AQ6ZSG2 479 aa19.8■□□□□ 0.76
SUMO3-203ENST00000397898 TMOD3Q9NYL9 352 aa19.8■□□□□ 0.76
SUMO3-203ENST00000397898 MIS18AQ9NYP9 233 aa19.8■□□□□ 0.76
SUMO3-203ENST00000397898 E9PSI1 815 aa19.79■□□□□ 0.76
SUMO3-203ENST00000397898 CHL1O00533 1208 aa19.79■□□□□ 0.76
SUMO3-203ENST00000397898 SLFN5Q08AF3 891 aa19.79■□□□□ 0.76
SUMO3-203ENST00000397898 BTBD11A6QL63 1104 aa19.78■□□□□ 0.76
SUMO3-203ENST00000397898 SIPA1L3O60292 1781 aaPredicted RBP19.78■□□□□ 0.76
SUMO3-203ENST00000397898 KCNQ2O43526 872 aa19.78■□□□□ 0.76
SUMO3-203ENST00000397898 PIGBQ92521 554 aa19.78■□□□□ 0.76
SUMO3-203ENST00000397898 MYH16Q9H6N6 1097 aa19.78■□□□□ 0.76
SUMO3-203ENST00000397898 TSR2Q969E8 191 aaKnown RBP19.77■□□□□ 0.76
SUMO3-203ENST00000397898 MBIPQ9NS73 344 aa19.77■□□□□ 0.76
SUMO3-203ENST00000397898 BABAM1Q9NWV8 329 aa19.77■□□□□ 0.76
SUMO3-203ENST00000397898 TSPYL4Q9UJ04 414 aa19.77■□□□□ 0.76
SUMO3-203ENST00000397898 ITGB4P16144 1822 aa19.77■□□□□ 0.75
SUMO3-203ENST00000397898 TRMT2AQ8IZ69 625 aaKnown RBP19.75■□□□□ 0.75
SUMO3-203ENST00000397898 FANCIQ9NVI1 1328 aa19.75■□□□□ 0.75
SUMO3-203ENST00000397898 SLC39A6Q13433 755 aa19.74■□□□□ 0.75
SUMO3-203ENST00000397898 DUSP27Q5VZP5 1158 aa19.74■□□□□ 0.75
SUMO3-203ENST00000397898 KAT6BQ8WYB5 2073 aa19.74■□□□□ 0.75
SUMO3-203ENST00000397898 NHSQ6T4R5 1651 aa19.73■□□□□ 0.75
SUMO3-203ENST00000397898 ZNF790Q6PG37 636 aa19.73■□□□□ 0.75
SUMO3-203ENST00000397898 PTF1AQ7RTS3 328 aa19.73■□□□□ 0.75
SUMO3-203ENST00000397898 SBF2Q86WG5 1849 aa19.73■□□□□ 0.75
SUMO3-203ENST00000397898 KCNQ3O43525 872 aa19.72■□□□□ 0.75
SUMO3-203ENST00000397898 ASAP1Q9ULH1 1129 aa19.72■□□□□ 0.75
SUMO3-203ENST00000397898 KDM3BQ7LBC6 1761 aa19.72■□□□□ 0.75
SUMO3-203ENST00000397898 TRIM37O94972 964 aa19.71■□□□□ 0.75
SUMO3-203ENST00000397898 TTC5Q8N0Z6 440 aa19.71■□□□□ 0.75
SUMO3-203ENST00000397898 BCL11BQ9C0K0 894 aaPredicted RBP19.71■□□□□ 0.75
SUMO3-203ENST00000397898 ATG3Q9NT62 314 aa19.71■□□□□ 0.75
SUMO3-203ENST00000397898 PAPPAQ13219 1627 aa19.7■□□□□ 0.74
SUMO3-203ENST00000397898 EIF4A1P60842 406 aaKnown RBP19.69■□□□□ 0.74
SUMO3-203ENST00000397898 EXOSC9Q06265 439 aaKnown RBP19.68■□□□□ 0.74
SUMO3-203ENST00000397898 KRT24Q2M2I5 525 aa19.67■□□□□ 0.74
SUMO3-203ENST00000397898 ZNF496Q96IT1 587 aaPredicted RBP19.67■□□□□ 0.74
SUMO3-203ENST00000397898 BTAF1O14981 1849 aa19.67■□□□□ 0.74
SUMO3-203ENST00000397898 KCPQ6ZWJ8 1503 aa19.66■□□□□ 0.74
SUMO3-203ENST00000397898 PTCD1O75127 700 aaKnown RBP19.66■□□□□ 0.74
SUMO3-203ENST00000397898 C8orf58Q8NAV2 365 aa19.66■□□□□ 0.74
SUMO3-203ENST00000397898 FMNL2Q96PY5 1086 aa19.66■□□□□ 0.74
SUMO3-203ENST00000397898 UBR2Q8IWV8 1755 aa19.65■□□□□ 0.74
SUMO3-203ENST00000397898 SMARCC1Q92922 1105 aaPredicted RBP19.65■□□□□ 0.74
SUMO3-203ENST00000397898 PALLDQ8WX93 1383 aa19.65■□□□□ 0.74
SUMO3-203ENST00000397898 TSPYL6Q8N831 410 aa19.65■□□□□ 0.74
SUMO3-203ENST00000397898 HEG1Q9ULI3 1381 aa19.64■□□□□ 0.73
SUMO3-203ENST00000397898 ELL2O00472 640 aaPredicted RBP19.64■□□□□ 0.73
SUMO3-203ENST00000397898 TWISTNBQ3B726 338 aaPredicted RBP19.63■□□□□ 0.73
SUMO3-203ENST00000397898 RBM42Q9BTD8 480 aaKnown RBP19.63■□□□□ 0.73
SUMO3-203ENST00000397898 GIGYF1O75420 1035 aaPredicted RBP19.62■□□□□ 0.73
SUMO3-203ENST00000397898 LOC102724428A0A0B4J2F2 783 aa19.61■□□□□ 0.73
SUMO3-203ENST00000397898 PRAMEF22A3QJZ6 481 aa19.61■□□□□ 0.73
SUMO3-203ENST00000397898 SNRPA1P09661 255 aaKnown RBP19.61■□□□□ 0.73
SUMO3-203ENST00000397898 SIK1P57059 783 aa19.61■□□□□ 0.73
SUMO3-203ENST00000397898 SLC4A9Q96Q91 983 aa19.61■□□□□ 0.73
SUMO3-203ENST00000397898 VAMP4O75379 141 aa19.6■□□□□ 0.73
SUMO3-203ENST00000397898 APBA3O96018 575 aa19.6■□□□□ 0.73
SUMO3-203ENST00000397898 VSIG10Q8N0Z9 540 aa19.6■□□□□ 0.73
SUMO3-203ENST00000397898 HOXB7P09629 217 aa19.6■□□□□ 0.73
SUMO3-203ENST00000397898 CT47B1P0C2W7 299 aaPredicted RBP19.6■□□□□ 0.73
SUMO3-203ENST00000397898 TNS1Q9HBL0 1735 aaKnown RBP19.59■□□□□ 0.73
SUMO3-203ENST00000397898 SOS1Q07889 1333 aaPredicted RBP19.59■□□□□ 0.73
SUMO3-203ENST00000397898 ATP6V1AP38606 617 aa19.58■□□□□ 0.73
SUMO3-203ENST00000397898 USP16Q9Y5T5 823 aa19.57■□□□□ 0.72
SUMO3-203ENST00000397898 C5P01031 1676 aa19.57■□□□□ 0.72
SUMO3-203ENST00000397898 PLSCR1O15162 318 aa19.57■□□□□ 0.72
SUMO3-203ENST00000397898 DNAJC10Q8IXB1 793 aa19.57■□□□□ 0.72
SUMO3-203ENST00000397898 LY75O60449 1722 aa19.56■□□□□ 0.72
SUMO3-203ENST00000397898 EIF2S2P20042 333 aaKnown RBP19.56■□□□□ 0.72
SUMO3-203ENST00000397898 HDGFL1Q5TGJ6 251 aa19.56■□□□□ 0.72
SUMO3-203ENST00000397898 TEX13AQ9BXU3 409 aaPredicted RBP19.56■□□□□ 0.72
SUMO3-203ENST00000397898 KCNQ4P56696 695 aa19.55■□□□□ 0.72
SUMO3-203ENST00000397898 SF3B2Q13435 895 aaKnown RBP19.55■□□□□ 0.72
SUMO3-203ENST00000397898 NECTIN2Q92692 538 aa19.55■□□□□ 0.72
SUMO3-203ENST00000397898 ZNF428Q96B54 188 aa19.55■□□□□ 0.72
SUMO3-203ENST00000397898 CCNL1Q9UK58 526 aaPredicted RBP19.55■□□□□ 0.72
SUMO3-203ENST00000397898 GTF3C3Q9Y5Q9 886 aa19.55■□□□□ 0.72
SUMO3-203ENST00000397898 ITPK1Q13572 414 aa19.55■□□□□ 0.72
SUMO3-203ENST00000397898 ZNF831Q5JPB2 1677 aa19.54■□□□□ 0.72
SUMO3-203ENST00000397898 TJP1Q07157 1748 aa19.54■□□□□ 0.72
SUMO3-203ENST00000397898 ILDR2Q71H61 639 aa19.54■□□□□ 0.72
SUMO3-203ENST00000397898 CCDC30Q5VVM6 783 aa19.53■□□□□ 0.72
SUMO3-203ENST00000397898 CCDC125Q86Z20 511 aa19.53■□□□□ 0.72
SUMO3-203ENST00000397898 CHMP4AQ9BY43 222 aa19.53■□□□□ 0.72
SUMO3-203ENST00000397898 RCAN3Q9UKA8 241 aa19.53■□□□□ 0.72
SUMO3-203ENST00000397898 LAMB4A4D0S4 1761 aa19.53■□□□□ 0.72
SUMO3-203ENST00000397898 CICQ96RK0 1608 aaPredicted RBP19.53■□□□□ 0.72
SUMO3-203ENST00000397898 TCERG1O14776 1098 aaKnown RBP19.52■□□□□ 0.72
SUMO3-203ENST00000397898 STARD3NLO95772 234 aa19.52■□□□□ 0.72
SUMO3-203ENST00000397898 RARSP54136 660 aaKnown RBP19.52■□□□□ 0.72
SUMO3-203ENST00000397898 TXNRD1Q16881 649 aa19.52■□□□□ 0.72
SUMO3-203ENST00000397898 SLC27A3Q5K4L6 730 aa19.52■□□□□ 0.72
SUMO3-203ENST00000397898 PROM2Q8N271 834 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms