RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 XRCC6P12956 609 aaKnown RBP eCLIP29.4■■■□□ 2.34e-16■■■□□ 18.2
PABPN1-202ENST00000397276 SDSP20132 328 aa29.38■■■□□ 2.29
PABPN1-202ENST00000397276 HDGFL1Q5TGJ6 251 aa29.38■■■□□ 2.29
PABPN1-202ENST00000397276 PHAXQ9H814 394 aaKnown RBP29.38■■■□□ 2.29
PABPN1-202ENST00000397276 L1TD1Q5T7N2 865 aaKnown RBP29.37■■■□□ 2.29
PABPN1-202ENST00000397276 SNX21Q969T3 373 aa29.36■■■□□ 2.29
PABPN1-202ENST00000397276 CHD2O14647 1828 aaKnown RBP29.35■■■□□ 2.29
PABPN1-202ENST00000397276 TSHZ3Q63HK5 1081 aa29.35■■■□□ 2.29
PABPN1-202ENST00000397276 PNMA6EA0A0J9YXQ4 647 aa29.35■■■□□ 2.29
PABPN1-202ENST00000397276 HSP90AA1P07900 732 aaKnown RBP29.34■■■□□ 2.29
PABPN1-202ENST00000397276 KCNH5Q8NCM2 988 aa29.34■■■□□ 2.29
PABPN1-202ENST00000397276 KCNQ3O43525 872 aa29.33■■■□□ 2.29
PABPN1-202ENST00000397276 MCM4P33991 863 aa29.33■■■□□ 2.29
PABPN1-202ENST00000397276 MPRIPQ6WCQ1 1025 aa29.33■■■□□ 2.29
PABPN1-202ENST00000397276 ADGRL3Q9HAR2 1447 aa29.33■■■□□ 2.29
PABPN1-202ENST00000397276 GCP02774 474 aa29.33■■■□□ 2.29
PABPN1-202ENST00000397276 LRRFIP2Q9Y608 721 aaKnown RBP29.32■■■□□ 2.28
PABPN1-202ENST00000397276 GNAI3P08754 354 aa29.31■■■□□ 2.28
PABPN1-202ENST00000397276 ZNF530Q6P9A1 599 aaPredicted RBP29.3■■■□□ 2.28
PABPN1-202ENST00000397276 GOLGA6L3A6NEY3 463 aa29.3■■■□□ 2.28
PABPN1-202ENST00000397276 LTN1O94822 1766 aa29.3■■■□□ 2.28
PABPN1-202ENST00000397276 ANXA1P04083 346 aa29.29■■■□□ 2.28
PABPN1-202ENST00000397276 TEFQ10587 303 aa29.28■■■□□ 2.28
PABPN1-202ENST00000397276 PDE1AP54750 535 aa29.28■■■□□ 2.28
PABPN1-202ENST00000397276 USP44Q9H0E7 712 aa29.28■■■□□ 2.28
PABPN1-202ENST00000397276 LRRC37A3O60309 1634 aa29.28■■■□□ 2.28
PABPN1-202ENST00000397276 USP26Q9BXU7 913 aa29.27■■■□□ 2.28
PABPN1-202ENST00000397276 BABAM1Q9NWV8 329 aa29.27■■■□□ 2.28
PABPN1-202ENST00000397276 EIF4A1P60842 406 aaKnown RBP29.27■■■□□ 2.28
PABPN1-202ENST00000397276 NFAT5O94916 1531 aa29.27■■■□□ 2.28
PABPN1-202ENST00000397276 NPHP4O75161 1426 aaPredicted RBP29.27■■■□□ 2.28
PABPN1-202ENST00000397276 FSD2A1L4K1 749 aa29.26■■■□□ 2.28
PABPN1-202ENST00000397276 PROSER2Q86WR7 435 aaPredicted RBP29.26■■■□□ 2.28
PABPN1-202ENST00000397276 K7ELQ4 463 aaPredicted RBP29.26■■■□□ 2.27
PABPN1-202ENST00000397276 ATP8B2P98198 1209 aa29.26■■■□□ 2.27
PABPN1-202ENST00000397276 CASC1Q6TDU7 716 aa29.26■■■□□ 2.27
PABPN1-202ENST00000397276 CHPF2Q9P2E5 772 aa29.26■■■□□ 2.27
PABPN1-202ENST00000397276 BTBD11A6QL63 1104 aa29.25■■■□□ 2.27
PABPN1-202ENST00000397276 LRRCC1Q9C099 1032 aa29.25■■■□□ 2.27
PABPN1-202ENST00000397276 CEMIPQ8WUJ3 1361 aa29.25■■■□□ 2.27
PABPN1-202ENST00000397276 UBTFL1P0CB47 393 aaPredicted RBP29.24■■■□□ 2.27
PABPN1-202ENST00000397276 ARHGEF25Q86VW2 580 aa29.24■■■□□ 2.27
PABPN1-202ENST00000397276 AXIN2Q9Y2T1 843 aa29.24■■■□□ 2.27
PABPN1-202ENST00000397276 PLEKHO1Q53GL0 409 aaPredicted RBP29.24■■■□□ 2.27
PABPN1-202ENST00000397276 ANKRD24Q8TF21 1146 aa29.24■■■□□ 2.27
PABPN1-202ENST00000397276 TRAK2O60296 914 aa29.23■■■□□ 2.27
PABPN1-202ENST00000397276 DDIT3P35638 169 aa29.23■■■□□ 2.27
PABPN1-202ENST00000397276 NCOA3Q9Y6Q9 1424 aa29.22■■■□□ 2.27
PABPN1-202ENST00000397276 AKAP4Q5JQC9 854 aa29.22■■■□□ 2.27
PABPN1-202ENST00000397276 KRT28Q7Z3Y7 464 aa29.22■■■□□ 2.27
PABPN1-202ENST00000397276 USP54Q70EL1 1684 aa29.22■■■□□ 2.27
PABPN1-202ENST00000397276 ZC3H6P61129 1189 aaKnown RBP29.21■■■□□ 2.27
PABPN1-202ENST00000397276 C1orf141Q5JVX7 400 aa29.2■■■□□ 2.27
PABPN1-202ENST00000397276 FAM208AQ9UK61 1670 aaKnown RBP29.2■■■□□ 2.27
PABPN1-202ENST00000397276 SOS1Q07889 1333 aaPredicted RBP29.2■■■□□ 2.27
PABPN1-202ENST00000397276 PI4KAP2A4QPH2 592 aa29.2■■■□□ 2.26
PABPN1-202ENST00000397276 PI4KAP1Q8N8J0 262 aa29.2■■■□□ 2.26
PABPN1-202ENST00000397276 TNPO1Q92973 898 aaKnown RBP29.2■■■□□ 2.26
PABPN1-202ENST00000397276 SRCIN1Q9C0H9 1055 aa29.2■■■□□ 2.26
PABPN1-202ENST00000397276 IL1RAPL2Q9NP60 686 aa29.2■■■□□ 2.26
PABPN1-202ENST00000397276 RILPL2Q969X0 211 aa29.18■■■□□ 2.26
PABPN1-202ENST00000397276 OSBPL3Q9H4L5 887 aa29.18■■■□□ 2.26
PABPN1-202ENST00000397276 RGPD2P0DJD1 1756 aa29.18■■■□□ 2.26
PABPN1-202ENST00000397276 NBPF7P0C2Y1 421 aaPredicted RBP29.18■■■□□ 2.26
PABPN1-202ENST00000397276 MX1P20591 662 aa29.18■■■□□ 2.26
PABPN1-202ENST00000397276 DDX17Q92841 729 aaKnown RBP29.18■■■□□ 2.26
PABPN1-202ENST00000397276 TRIM6-TRIM34B2RNG4 842 aa29.17■■■□□ 2.26
PABPN1-202ENST00000397276 RABEP1Q15276 862 aa29.17■■■□□ 2.26
PABPN1-202ENST00000397276 RNMTO43148 476 aaKnown RBP29.16■■■□□ 2.26
PABPN1-202ENST00000397276 NAP1L5Q96NT1 182 aaPredicted RBP29.16■■■□□ 2.26
PABPN1-202ENST00000397276 ZNF142P52746 1687 aaPredicted RBP29.16■■■□□ 2.26
PABPN1-202ENST00000397276 PPP1R42Q7Z4L9 355 aa29.16■■■□□ 2.26
PABPN1-202ENST00000397276 PRAMEF22A3QJZ6 481 aa29.15■■■□□ 2.26
PABPN1-202ENST00000397276 ERC2O15083 957 aa29.15■■■□□ 2.26
PABPN1-202ENST00000397276 IBTKQ9P2D0 1353 aaPredicted RBP29.15■■■□□ 2.26
PABPN1-202ENST00000397276 AMOTQ4VCS5 1084 aa29.15■■■□□ 2.26
PABPN1-202ENST00000397276 SURF6O75683 361 aaKnown RBP29.14■■■□□ 2.26
PABPN1-202ENST00000397276 REC8O95072 547 aa29.14■■■□□ 2.26
PABPN1-202ENST00000397276 DNAAF4Q8WXU2 420 aa29.13■■■□□ 2.25
PABPN1-202ENST00000397276 NUTM1Q86Y26 1132 aa29.13■■■□□ 2.25
PABPN1-202ENST00000397276 PXDNQ92626 1479 aa29.13■■■□□ 2.25
PABPN1-202ENST00000397276 SALL3Q9BXA9 1300 aa29.13■■■□□ 2.25
PABPN1-202ENST00000397276 SRGAP3O43295 1099 aa29.12■■■□□ 2.25
PABPN1-202ENST00000397276 RAB3GAP1Q15042 981 aa29.12■■■□□ 2.25
PABPN1-202ENST00000397276 CIZ1Q9ULV3 898 aaPredicted RBP29.11■■■□□ 2.25
PABPN1-202ENST00000397276 ADAMTSL3P82987 1691 aa29.11■■■□□ 2.25
PABPN1-202ENST00000397276 BEND3Q5T5X7 828 aa29.11■■■□□ 2.25
PABPN1-202ENST00000397276 PROSER3Q2NL68 480 aa29.1■■■□□ 2.25
PABPN1-202ENST00000397276 UNC5CLQ8IV45 518 aa29.1■■■□□ 2.25
PABPN1-202ENST00000397276 SSH3Q8TE77 659 aa29.1■■■□□ 2.25
PABPN1-202ENST00000397276 C19orf44Q9H6X5 657 aa29.09■■■□□ 2.25
PABPN1-202ENST00000397276 MAP4K4O95819 1239 aaPredicted RBP29.09■■■□□ 2.25
PABPN1-202ENST00000397276 SSFA2P28290 1259 aa29.09■■■□□ 2.25
PABPN1-202ENST00000397276 DDX11L8A8MPP1 907 aa29.08■■■□□ 2.25
PABPN1-202ENST00000397276 HOXB7P09629 217 aa29.08■■■□□ 2.25
PABPN1-202ENST00000397276 CLCN1P35523 988 aa29.07■■■□□ 2.24
PABPN1-202ENST00000397276 DBF4Q9UBU7 674 aaPredicted RBP29.07■■■□□ 2.24
PABPN1-202ENST00000397276 NLRP2Q9NX02 1062 aa29.07■■■□□ 2.24
PABPN1-202ENST00000397276 GIGYF1O75420 1035 aaPredicted RBP29.06■■■□□ 2.24
PABPN1-202ENST00000397276 PXDNLA1KZ92 1463 aa29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms