RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 E9PSI1 815 aa19.29■□□□□ 0.68
CAPN3-207ENST00000397200 TEFQ10587 303 aa19.29■□□□□ 0.68
CAPN3-207ENST00000397200 RGS12O14924 1447 aa19.28■□□□□ 0.68
CAPN3-207ENST00000397200 DOT1LQ8TEK3 1739 aa19.28■□□□□ 0.68
CAPN3-207ENST00000397200 KAT6BQ8WYB5 2073 aa19.27■□□□□ 0.68
CAPN3-207ENST00000397200 SIPA1L3O60292 1781 aaPredicted RBP19.27■□□□□ 0.68
CAPN3-207ENST00000397200 MRC1P22897 1456 aa19.27■□□□□ 0.68
CAPN3-207ENST00000397200 ERVV-2B6SEH9 535 aa19.26■□□□□ 0.67
CAPN3-207ENST00000397200 IFT57Q9NWB7 429 aa19.26■□□□□ 0.67
CAPN3-207ENST00000397200 LAS1LQ9Y4W2 734 aaKnown RBP19.26■□□□□ 0.67
CAPN3-207ENST00000397200 CABP4P57796 275 aa19.25■□□□□ 0.67
CAPN3-207ENST00000397200 GNAI1P63096 354 aa19.25■□□□□ 0.67
CAPN3-207ENST00000397200 KRT27Q7Z3Y8 459 aa19.25■□□□□ 0.67
CAPN3-207ENST00000397200 SLC52A2Q9HAB3 445 aa19.25■□□□□ 0.67
CAPN3-207ENST00000397200 SPINK5Q9NQ38 1064 aaPredicted RBP19.25■□□□□ 0.67
CAPN3-207ENST00000397200 ITGB4P16144 1822 aa19.25■□□□□ 0.67
CAPN3-207ENST00000397200 TAF7Q15545 349 aaPredicted RBP19.25■□□□□ 0.67
CAPN3-207ENST00000397200 CFAP44Q96MT7 982 aa19.25■□□□□ 0.67
CAPN3-207ENST00000397200 MYH16Q9H6N6 1097 aa19.24■□□□□ 0.67
CAPN3-207ENST00000397200 NFATC2IPQ8NCF5 419 aa19.23■□□□□ 0.67
CAPN3-207ENST00000397200 EXOC6Q8TAG9 804 aa19.23■□□□□ 0.67
CAPN3-207ENST00000397200 CCDC136Q96JN2 1154 aa19.23■□□□□ 0.67
CAPN3-207ENST00000397200 ZNF853P0CG23 659 aa19.22■□□□□ 0.67
CAPN3-207ENST00000397200 FAM182BQ5T319 152 aa19.22■□□□□ 0.67
CAPN3-207ENST00000397200 TMOD3Q9NYL9 352 aa19.22■□□□□ 0.67
CAPN3-207ENST00000397200 BTBD11A6QL63 1104 aa19.22■□□□□ 0.67
CAPN3-207ENST00000397200 CHL1O00533 1208 aa19.22■□□□□ 0.67
CAPN3-207ENST00000397200 ACSBG1Q96GR2 724 aa19.22■□□□□ 0.67
CAPN3-207ENST00000397200 BABAM1Q9NWV8 329 aa19.22■□□□□ 0.67
CAPN3-207ENST00000397200 BCL9O00512 1426 aa19.21■□□□□ 0.67
CAPN3-207ENST00000397200 KDM3BQ7LBC6 1761 aa19.21■□□□□ 0.67
CAPN3-207ENST00000397200 SYTL4Q96C24 671 aaPredicted RBP19.21■□□□□ 0.67
CAPN3-207ENST00000397200 MIS18AQ9NYP9 233 aa19.21■□□□□ 0.67
CAPN3-207ENST00000397200 TSPYL4Q9UJ04 414 aa19.21■□□□□ 0.67
CAPN3-207ENST00000397200 FANCIQ9NVI1 1328 aa19.2■□□□□ 0.66
CAPN3-207ENST00000397200 PRIM1P49642 420 aaKnown RBP19.2■□□□□ 0.66
CAPN3-207ENST00000397200 TSR2Q969E8 191 aaKnown RBP19.2■□□□□ 0.66
CAPN3-207ENST00000397200 MBIPQ9NS73 344 aa19.2■□□□□ 0.66
CAPN3-207ENST00000397200 SBF2Q86WG5 1849 aa19.2■□□□□ 0.66
CAPN3-207ENST00000397200 NHSQ6T4R5 1651 aa19.19■□□□□ 0.66
CAPN3-207ENST00000397200 FAM196AQ6ZSG2 479 aa19.18■□□□□ 0.66
CAPN3-207ENST00000397200 PIGBQ92521 554 aa19.18■□□□□ 0.66
CAPN3-207ENST00000397200 PAPPAQ13219 1627 aa19.17■□□□□ 0.66
CAPN3-207ENST00000397200 PLIN1O60240 522 aa19.16■□□□□ 0.66
CAPN3-207ENST00000397200 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.16■□□□□ 0.66
CAPN3-207ENST00000397200 KCNQ2O43526 872 aa19.15■□□□□ 0.66
CAPN3-207ENST00000397200 SLC39A6Q13433 755 aa19.15■□□□□ 0.66
CAPN3-207ENST00000397200 TTC5Q8N0Z6 440 aa19.15■□□□□ 0.66
CAPN3-207ENST00000397200 CRBNQ96SW2 442 aa19.15■□□□□ 0.66
CAPN3-207ENST00000397200 ZNF790Q6PG37 636 aa19.14■□□□□ 0.66
CAPN3-207ENST00000397200 RBM19Q9Y4C8 960 aaKnown RBP19.14■□□□□ 0.66
CAPN3-207ENST00000397200 BTAF1O14981 1849 aa19.13■□□□□ 0.65
CAPN3-207ENST00000397200 KCNQ3O43525 872 aa19.13■□□□□ 0.65
CAPN3-207ENST00000397200 EXOSC9Q06265 439 aaKnown RBP19.13■□□□□ 0.65
CAPN3-207ENST00000397200 UBR2Q8IWV8 1755 aa19.13■□□□□ 0.65
CAPN3-207ENST00000397200 EIF4A1P60842 406 aaKnown RBP19.11■□□□□ 0.65
CAPN3-207ENST00000397200 C20orf194Q5TEA3 1177 aa19.11■□□□□ 0.65
CAPN3-207ENST00000397200 ATG3Q9NT62 314 aa19.11■□□□□ 0.65
CAPN3-207ENST00000397200 ASAP1Q9ULH1 1129 aa19.11■□□□□ 0.65
CAPN3-207ENST00000397200 BCL11BQ9C0K0 894 aaPredicted RBP19.11■□□□□ 0.65
CAPN3-207ENST00000397200 FMNL2Q96PY5 1086 aa19.1■□□□□ 0.65
CAPN3-207ENST00000397200 KCPQ6ZWJ8 1503 aa19.1■□□□□ 0.65
CAPN3-207ENST00000397200 TRIM37O94972 964 aa19.09■□□□□ 0.65
CAPN3-207ENST00000397200 KRT24Q2M2I5 525 aa19.09■□□□□ 0.65
CAPN3-207ENST00000397200 PTF1AQ7RTS3 328 aa19.09■□□□□ 0.65
CAPN3-207ENST00000397200 C8orf58Q8NAV2 365 aa19.09■□□□□ 0.65
CAPN3-207ENST00000397200 SMARCC1Q92922 1105 aaPredicted RBP19.09■□□□□ 0.65
CAPN3-207ENST00000397200 ELL2O00472 640 aaPredicted RBP19.08■□□□□ 0.65
CAPN3-207ENST00000397200 TWISTNBQ3B726 338 aaPredicted RBP19.08■□□□□ 0.65
CAPN3-207ENST00000397200 ZNF496Q96IT1 587 aaPredicted RBP19.08■□□□□ 0.65
CAPN3-207ENST00000397200 PTCD1O75127 700 aaKnown RBP19.07■□□□□ 0.64
CAPN3-207ENST00000397200 CT47B1P0C2W7 299 aaPredicted RBP19.07■□□□□ 0.64
CAPN3-207ENST00000397200 PALLDQ8WX93 1383 aa19.07■□□□□ 0.64
CAPN3-207ENST00000397200 TSPYL6Q8N831 410 aa19.07■□□□□ 0.64
CAPN3-207ENST00000397200 HEG1Q9ULI3 1381 aa19.06■□□□□ 0.64
CAPN3-207ENST00000397200 EP400Q96L91 3159 aa19.06■□□□□ 0.64
CAPN3-207ENST00000397200 BCAR3O75815 825 aa19.06■□□□□ 0.64
CAPN3-207ENST00000397200 RBM42Q9BTD8 480 aaKnown RBP19.06■□□□□ 0.64
CAPN3-207ENST00000397200 SOS1Q07889 1333 aaPredicted RBP19.06■□□□□ 0.64
CAPN3-207ENST00000397200 C5P01031 1676 aa19.05■□□□□ 0.64
CAPN3-207ENST00000397200 PDE3AQ14432 1141 aa19.05■□□□□ 0.64
CAPN3-207ENST00000397200 GIGYF1O75420 1035 aaPredicted RBP19.04■□□□□ 0.64
CAPN3-207ENST00000397200 HOXB7P09629 217 aa19.04■□□□□ 0.64
CAPN3-207ENST00000397200 SNRPA1P09661 255 aaKnown RBP19.04■□□□□ 0.64
CAPN3-207ENST00000397200 RARSP54136 660 aaKnown RBP19.04■□□□□ 0.64
CAPN3-207ENST00000397200 KDM2BQ8NHM5 1336 aa19.04■□□□□ 0.64
CAPN3-207ENST00000397200 TNS1Q9HBL0 1735 aaKnown RBP19.04■□□□□ 0.64
CAPN3-207ENST00000397200 LAMB4A4D0S4 1761 aa19.04■□□□□ 0.64
CAPN3-207ENST00000397200 VAMP4O75379 141 aa19.03■□□□□ 0.64
CAPN3-207ENST00000397200 LY75O60449 1722 aa19.03■□□□□ 0.64
CAPN3-207ENST00000397200 VSIG10Q8N0Z9 540 aa19.03■□□□□ 0.64
CAPN3-207ENST00000397200 ZNF428Q96B54 188 aa19.02■□□□□ 0.64
CAPN3-207ENST00000397200 CHMP4AQ9BY43 222 aa19.02■□□□□ 0.64
CAPN3-207ENST00000397200 LOC102724428A0A0B4J2F2 783 aa19.01■□□□□ 0.63
CAPN3-207ENST00000397200 PRAMEF22A3QJZ6 481 aa19.01■□□□□ 0.63
CAPN3-207ENST00000397200 SIK1P57059 783 aa19.01■□□□□ 0.63
CAPN3-207ENST00000397200 ZNF831Q5JPB2 1677 aa19.01■□□□□ 0.63
CAPN3-207ENST00000397200 TJP1Q07157 1748 aa19.01■□□□□ 0.63
CAPN3-207ENST00000397200 CICQ96RK0 1608 aaPredicted RBP19■□□□□ 0.63
CAPN3-207ENST00000397200 EIF2S2P20042 333 aaKnown RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms