RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 WASHC2AQ641Q2 1341 aa18.79■□□□□ 0.6
SEC13-205ENST00000397101 MMP10P09238 476 aa18.79■□□□□ 0.6
SEC13-205ENST00000397101 ATP6V1AP38606 617 aa18.79■□□□□ 0.6
SEC13-205ENST00000397101 ITPK1Q13572 414 aa18.79■□□□□ 0.6
SEC13-205ENST00000397101 SMIM5Q71RC9 77 aa18.79■□□□□ 0.6
SEC13-205ENST00000397101 NLGN1Q8N2Q7 840 aa18.79■□□□□ 0.6
SEC13-205ENST00000397101 DNAJC5GQ8N7S2 189 aa18.79■□□□□ 0.6
SEC13-205ENST00000397101 KIF20BQ96Q89 1820 aa18.79■□□□□ 0.6
SEC13-205ENST00000397101 IFNL2Q8IZJ0 200 aa18.78■□□□□ 0.6
SEC13-205ENST00000397101 WWC3Q9ULE0 1092 aa18.78■□□□□ 0.6
SEC13-205ENST00000397101 ASAP1Q9ULH1 1129 aa18.78■□□□□ 0.6
SEC13-205ENST00000397101 EMILIN1Q9Y6C2 1016 aa18.78■□□□□ 0.6
SEC13-205ENST00000397101 C10orf71Q711Q0 1435 aa18.77■□□□□ 0.6
SEC13-205ENST00000397101 PHKG2P15735 406 aa18.77■□□□□ 0.6
SEC13-205ENST00000397101 ADRA2BP18089 450 aa18.77■□□□□ 0.6
SEC13-205ENST00000397101 TRAPPC3LQ5T215 181 aa18.76■□□□□ 0.59
SEC13-205ENST00000397101 RC3H1Q5TC82 1133 aaKnown RBP18.76■□□□□ 0.59
SEC13-205ENST00000397101 ATG3Q9NT62 314 aa18.76■□□□□ 0.59
SEC13-205ENST00000397101 RTCBQ9Y3I0 505 aaKnown RBP18.76■□□□□ 0.59
SEC13-205ENST00000397101 KIAA1551Q9HCM1 1747 aa18.76■□□□□ 0.59
SEC13-205ENST00000397101 KDRP35968 1356 aa18.76■□□□□ 0.59
SEC13-205ENST00000397101 ANKRD26Q9UPS8 1709 aa18.75■□□□□ 0.59
SEC13-205ENST00000397101 EYA1Q99502 592 aa18.75■□□□□ 0.59
SEC13-205ENST00000397101 ZNF831Q5JPB2 1677 aa18.75■□□□□ 0.59
SEC13-205ENST00000397101 ZNF316A6NFI3 1004 aaPredicted RBP18.74■□□□□ 0.59
SEC13-205ENST00000397101 CARD14Q9BXL6 1004 aa18.74■□□□□ 0.59
SEC13-205ENST00000397101 CCDC87Q9NVE4 849 aa18.74■□□□□ 0.59
SEC13-205ENST00000397101 BCS1LQ9Y276 419 aa18.74■□□□□ 0.59
SEC13-205ENST00000397101 RBM46Q8TBY0 533 aaKnown RBP18.73■□□□□ 0.59
SEC13-205ENST00000397101 CNTNAP4Q9C0A0 1308 aa18.73■□□□□ 0.59
SEC13-205ENST00000397101 ERVV-2B6SEH9 535 aa18.72■□□□□ 0.59
SEC13-205ENST00000397101 PCNTO95613 3336 aa18.72■□□□□ 0.59
SEC13-205ENST00000397101 A0A0G2JLW4 131 aa18.71■□□□□ 0.59
SEC13-205ENST00000397101 ARHGAP27Q6ZUM4 889 aa18.71■□□□□ 0.59
SEC13-205ENST00000397101 ARHGEF1Q92888 912 aaKnown RBP18.71■□□□□ 0.59
SEC13-205ENST00000397101 HSP90AB1P08238 724 aaKnown RBP18.7■□□□□ 0.58
SEC13-205ENST00000397101 GYS1P13807 737 aa18.7■□□□□ 0.58
SEC13-205ENST00000397101 FSTL1Q12841 308 aa18.7■□□□□ 0.58
SEC13-205ENST00000397101 SLC4A9Q96Q91 983 aa18.7■□□□□ 0.58
SEC13-205ENST00000397101 POLR3GLQ9BT43 218 aa18.7■□□□□ 0.58
SEC13-205ENST00000397101 PPM1GO15355 546 aaPredicted RBP18.69■□□□□ 0.58
SEC13-205ENST00000397101 RPS6KA4O75676 772 aa18.69■□□□□ 0.58
SEC13-205ENST00000397101 FCHSD2O94868 740 aa18.69■□□□□ 0.58
SEC13-205ENST00000397101 DPEP1P16444 411 aa18.69■□□□□ 0.58
SEC13-205ENST00000397101 NMRK2Q9NPI5 230 aa18.69■□□□□ 0.58
SEC13-205ENST00000397101 POLKQ9UBT6 870 aa18.69■□□□□ 0.58
SEC13-205ENST00000397101 C4AP0C0L4 1744 aa18.69■□□□□ 0.58
SEC13-205ENST00000397101 N4BP2Q86UW6 1770 aaPredicted RBP18.68■□□□□ 0.58
SEC13-205ENST00000397101 KCNA3P22001 575 aa18.68■□□□□ 0.58
SEC13-205ENST00000397101 RFC4P35249 363 aa18.68■□□□□ 0.58
SEC13-205ENST00000397101 JMYQ8N9B5 988 aa18.68■□□□□ 0.58
SEC13-205ENST00000397101 DCAF5Q96JK2 942 aa18.68■□□□□ 0.58
SEC13-205ENST00000397101 PARP3Q9Y6F1 533 aa18.68■□□□□ 0.58
SEC13-205ENST00000397101 BRCA1P38398 1863 aaKnown RBP18.68■□□□□ 0.58
SEC13-205ENST00000397101 KLRG1Q96E93 195 aa18.67■□□□□ 0.58
SEC13-205ENST00000397101 C9orf131Q5VYM1 1079 aa18.66■□□□□ 0.58
SEC13-205ENST00000397101 PIM2Q9P1W9 311 aa18.66■□□□□ 0.58
SEC13-205ENST00000397101 COL5A3P25940 1745 aaPredicted RBP18.66■□□□□ 0.58
SEC13-205ENST00000397101 WDR90Q96KV7 1748 aa18.66■□□□□ 0.58
SEC13-205ENST00000397101 ARFGEF1Q9Y6D6 1849 aa18.65■□□□□ 0.58
SEC13-205ENST00000397101 EIF4A2Q14240 407 aaKnown RBP18.65■□□□□ 0.58
SEC13-205ENST00000397101 C16orf71Q8IYS4 520 aaPredicted RBP18.65■□□□□ 0.58
SEC13-205ENST00000397101 KDM2BQ8NHM5 1336 aa18.65■□□□□ 0.58
SEC13-205ENST00000397101 RBM42Q9BTD8 480 aaKnown RBP18.64■□□□□ 0.57
SEC13-205ENST00000397101 DALRD3Q5D0E6 543 aaKnown RBP18.63■□□□□ 0.57
SEC13-205ENST00000397101 AMOTQ4VCS5 1084 aa18.62■□□□□ 0.57
SEC13-205ENST00000397101 PLEKHO1Q53GL0 409 aaPredicted RBP18.62■□□□□ 0.57
SEC13-205ENST00000397101 ZC3H4Q9UPT8 1303 aaKnown RBP18.62■□□□□ 0.57
SEC13-205ENST00000397101 KDM6AO15550 1401 aaPredicted RBP18.6■□□□□ 0.57
SEC13-205ENST00000397101 USP42Q9H9J4 1324 aaKnown RBP18.6■□□□□ 0.57
SEC13-205ENST00000397101 CABP4P57796 275 aa18.6■□□□□ 0.57
SEC13-205ENST00000397101 KCPQ6ZWJ8 1503 aa18.59■□□□□ 0.57
SEC13-205ENST00000397101 MYH14Q7Z406 1995 aaKnown RBP18.59■□□□□ 0.57
SEC13-205ENST00000397101 CRKLP46109 303 aaKnown RBP18.58■□□□□ 0.56
SEC13-205ENST00000397101 FKBP8Q14318 412 aa18.58■□□□□ 0.56
SEC13-205ENST00000397101 RNF181Q9P0P0 153 aa18.58■□□□□ 0.56
SEC13-205ENST00000397101 DDR1Q08345 913 aa18.57■□□□□ 0.56
SEC13-205ENST00000397101 COL13A1Q5TAT6 717 aaPredicted RBP18.57■□□□□ 0.56
SEC13-205ENST00000397101 SMC1BQ8NDV3 1235 aa18.57■□□□□ 0.56
SEC13-205ENST00000397101 TNRC6CQ9HCJ0 1690 aaKnown RBP18.57■□□□□ 0.56
SEC13-205ENST00000397101 TM4SF1P30408 202 aa18.56■□□□□ 0.56
SEC13-205ENST00000397101 MTHFSP49914 203 aa18.56■□□□□ 0.56
SEC13-205ENST00000397101 ZNF530Q6P9A1 599 aaPredicted RBP18.56■□□□□ 0.56
SEC13-205ENST00000397101 RRAGCQ9HB90 399 aa18.56■□□□□ 0.56
SEC13-205ENST00000397101 KIF7Q2M1P5 1343 aa18.55■□□□□ 0.56
SEC13-205ENST00000397101 POLRMTO00411 1230 aaKnown RBP18.55■□□□□ 0.56
SEC13-205ENST00000397101 HTRA3P83110 453 aa18.55■□□□□ 0.56
SEC13-205ENST00000397101 SRP68Q9UHB9 627 aaKnown RBP18.55■□□□□ 0.56
SEC13-205ENST00000397101 PTCD1O75127 700 aaKnown RBP18.54■□□□□ 0.56
SEC13-205ENST00000397101 C1orf141Q5JVX7 400 aa18.53■□□□□ 0.56
SEC13-205ENST00000397101 INTS5Q6P9B9 1019 aaKnown RBP18.53■□□□□ 0.56
SEC13-205ENST00000397101 NFATC2IPQ8NCF5 419 aa18.53■□□□□ 0.56
SEC13-205ENST00000397101 CHRNA5P30532 468 aa18.52■□□□□ 0.56
SEC13-205ENST00000397101 DDX10Q13206 875 aaKnown RBP18.52■□□□□ 0.56
SEC13-205ENST00000397101 SBF1O95248 1867 aa18.52■□□□□ 0.55
SEC13-205ENST00000397101 ADAMTS7Q9UKP4 1686 aa18.51■□□□□ 0.55
SEC13-205ENST00000397101 PRELPP51888 382 aa18.51■□□□□ 0.55
SEC13-205ENST00000397101 TJP1Q07157 1748 aa18.5■□□□□ 0.55
SEC13-205ENST00000397101 GLTPD2A6NH11 291 aa18.5■□□□□ 0.55
SEC13-205ENST00000397101 ZPR1O75312 459 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms