RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 DOT1LQ8TEK3 1739 aa19.23■□□□□ 0.67
TM9SF1-202ENST00000396854 DUSP27Q5VZP5 1158 aa19.23■□□□□ 0.67
TM9SF1-202ENST00000396854 CFAP44Q96MT7 982 aa19.23■□□□□ 0.67
TM9SF1-202ENST00000396854 BRWD3Q6RI45 1802 aa19.22■□□□□ 0.67
TM9SF1-202ENST00000396854 GNAI1P63096 354 aa19.22■□□□□ 0.67
TM9SF1-202ENST00000396854 MYH16Q9H6N6 1097 aa19.22■□□□□ 0.67
TM9SF1-202ENST00000396854 MSH5O43196 834 aa19.21■□□□□ 0.67
TM9SF1-202ENST00000396854 RBM6P78332 1123 aaKnown RBP19.21■□□□□ 0.67
TM9SF1-202ENST00000396854 RGS17Q9UGC6 210 aaPredicted RBP19.21■□□□□ 0.67
TM9SF1-202ENST00000396854 BABAM1Q9NWV8 329 aa19.2■□□□□ 0.66
TM9SF1-202ENST00000396854 CHL1O00533 1208 aa19.2■□□□□ 0.66
TM9SF1-202ENST00000396854 PAPPAQ13219 1627 aa19.19■□□□□ 0.66
TM9SF1-202ENST00000396854 TEFQ10587 303 aa19.19■□□□□ 0.66
TM9SF1-202ENST00000396854 TAF7Q15545 349 aaPredicted RBP19.19■□□□□ 0.66
TM9SF1-202ENST00000396854 MARCH10Q8NA82 808 aaPredicted RBP19.19■□□□□ 0.66
TM9SF1-202ENST00000396854 ERVV-2B6SEH9 535 aa19.18■□□□□ 0.66
TM9SF1-202ENST00000396854 SLC52A2Q9HAB3 445 aa19.18■□□□□ 0.66
TM9SF1-202ENST00000396854 A0A0G2JS52 829 aa19.18■□□□□ 0.66
TM9SF1-202ENST00000396854 SEPT12Q8IYM1 358 aa19.18■□□□□ 0.66
TM9SF1-202ENST00000396854 MBIPQ9NS73 344 aa19.18■□□□□ 0.66
TM9SF1-202ENST00000396854 LAS1LQ9Y4W2 734 aaKnown RBP19.17■□□□□ 0.66
TM9SF1-202ENST00000396854 TSR2Q969E8 191 aaKnown RBP19.16■□□□□ 0.66
TM9SF1-202ENST00000396854 BCL9O00512 1426 aa19.16■□□□□ 0.66
TM9SF1-202ENST00000396854 SBF2Q86WG5 1849 aa19.16■□□□□ 0.66
TM9SF1-202ENST00000396854 UBR2Q8IWV8 1755 aa19.16■□□□□ 0.66
TM9SF1-202ENST00000396854 RXRBP28702 533 aa19.15■□□□□ 0.66
TM9SF1-202ENST00000396854 TSPYL4Q9UJ04 414 aa19.15■□□□□ 0.66
TM9SF1-202ENST00000396854 CABP4P57796 275 aa19.14■□□□□ 0.65
TM9SF1-202ENST00000396854 NFATC2IPQ8NCF5 419 aa19.14■□□□□ 0.65
TM9SF1-202ENST00000396854 NHSQ6T4R5 1651 aa19.14■□□□□ 0.65
TM9SF1-202ENST00000396854 KAT6BQ8WYB5 2073 aa19.13■□□□□ 0.65
TM9SF1-202ENST00000396854 POTEAQ6S8J7 498 aa19.13■□□□□ 0.65
TM9SF1-202ENST00000396854 BTBD11A6QL63 1104 aa19.13■□□□□ 0.65
TM9SF1-202ENST00000396854 MIS18AQ9NYP9 233 aa19.13■□□□□ 0.65
TM9SF1-202ENST00000396854 RGS12O14924 1447 aa19.12■□□□□ 0.65
TM9SF1-202ENST00000396854 EXOSC9Q06265 439 aaKnown RBP19.11■□□□□ 0.65
TM9SF1-202ENST00000396854 CT47B1P0C2W7 299 aaPredicted RBP19.1■□□□□ 0.65
TM9SF1-202ENST00000396854 TMOD3Q9NYL9 352 aa19.1■□□□□ 0.65
TM9SF1-202ENST00000396854 CCDC136Q96JN2 1154 aa19.1■□□□□ 0.65
TM9SF1-202ENST00000396854 RCAN3Q9UKA8 241 aa19.09■□□□□ 0.65
TM9SF1-202ENST00000396854 ZNF790Q6PG37 636 aa19.09■□□□□ 0.65
TM9SF1-202ENST00000396854 KRT27Q7Z3Y8 459 aa19.08■□□□□ 0.64
TM9SF1-202ENST00000396854 KCPQ6ZWJ8 1503 aa19.07■□□□□ 0.64
TM9SF1-202ENST00000396854 C5P01031 1676 aa19.07■□□□□ 0.64
TM9SF1-202ENST00000396854 BTAF1O14981 1849 aa19.07■□□□□ 0.64
TM9SF1-202ENST00000396854 EIF4A1P60842 406 aaKnown RBP19.07■□□□□ 0.64
TM9SF1-202ENST00000396854 PIGBQ92521 554 aa19.07■□□□□ 0.64
TM9SF1-202ENST00000396854 HEG1Q9ULI3 1381 aa19.07■□□□□ 0.64
TM9SF1-202ENST00000396854 LAMB4A4D0S4 1761 aa19.07■□□□□ 0.64
TM9SF1-202ENST00000396854 KCNQ3O43525 872 aa19.07■□□□□ 0.64
TM9SF1-202ENST00000396854 PRIM1P49642 420 aaKnown RBP19.07■□□□□ 0.64
TM9SF1-202ENST00000396854 C8orf58Q8NAV2 365 aa19.07■□□□□ 0.64
TM9SF1-202ENST00000396854 SOS1Q07889 1333 aaPredicted RBP19.06■□□□□ 0.64
TM9SF1-202ENST00000396854 RRP1P56182 461 aaKnown RBP19.06■□□□□ 0.64
TM9SF1-202ENST00000396854 SLC39A6Q13433 755 aa19.05■□□□□ 0.64
TM9SF1-202ENST00000396854 TWISTNBQ3B726 338 aaPredicted RBP19.05■□□□□ 0.64
TM9SF1-202ENST00000396854 TSPYL6Q8N831 410 aa19.05■□□□□ 0.64
TM9SF1-202ENST00000396854 ACSBG1Q96GR2 724 aa19.05■□□□□ 0.64
TM9SF1-202ENST00000396854 KRT24Q2M2I5 525 aa19.04■□□□□ 0.64
TM9SF1-202ENST00000396854 TTC5Q8N0Z6 440 aa19.04■□□□□ 0.64
TM9SF1-202ENST00000396854 ZNF428Q96B54 188 aa19.04■□□□□ 0.64
TM9SF1-202ENST00000396854 SYTL4Q96C24 671 aaPredicted RBP19.04■□□□□ 0.64
TM9SF1-202ENST00000396854 CACNA1FO60840 1977 aa19.04■□□□□ 0.64
TM9SF1-202ENST00000396854 VAMP4O75379 141 aa19.04■□□□□ 0.64
TM9SF1-202ENST00000396854 FAM182BQ5T319 152 aa19.04■□□□□ 0.64
TM9SF1-202ENST00000396854 CICQ96RK0 1608 aaPredicted RBP19.03■□□□□ 0.64
TM9SF1-202ENST00000396854 HOXB7P09629 217 aa19.03■□□□□ 0.64
TM9SF1-202ENST00000396854 FAM196AQ6ZSG2 479 aa19.03■□□□□ 0.64
TM9SF1-202ENST00000396854 ZNF831Q5JPB2 1677 aa19.03■□□□□ 0.64
TM9SF1-202ENST00000396854 ERICH6Q7L0X2 663 aa19.02■□□□□ 0.63
TM9SF1-202ENST00000396854 ATG3Q9NT62 314 aa19.02■□□□□ 0.63
TM9SF1-202ENST00000396854 KCNQ2O43526 872 aa19.01■□□□□ 0.63
TM9SF1-202ENST00000396854 ZNF496Q96IT1 587 aaPredicted RBP19.01■□□□□ 0.63
TM9SF1-202ENST00000396854 FMNL2Q96PY5 1086 aa19.01■□□□□ 0.63
TM9SF1-202ENST00000396854 ASAP1Q9ULH1 1129 aa19.01■□□□□ 0.63
TM9SF1-202ENST00000396854 ELL2O00472 640 aaPredicted RBP19.01■□□□□ 0.63
TM9SF1-202ENST00000396854 LY75O60449 1722 aa19■□□□□ 0.63
TM9SF1-202ENST00000396854 GIGYF1O75420 1035 aaPredicted RBP19■□□□□ 0.63
TM9SF1-202ENST00000396854 RARSP54136 660 aaKnown RBP19■□□□□ 0.63
TM9SF1-202ENST00000396854 TJP1Q07157 1748 aa19■□□□□ 0.63
TM9SF1-202ENST00000396854 ALDH1L2Q3SY69 923 aa18.99■□□□□ 0.63
TM9SF1-202ENST00000396854 EP400Q96L91 3159 aa18.98■□□□□ 0.63
TM9SF1-202ENST00000396854 SNRPA1P09661 255 aaKnown RBP18.97■□□□□ 0.63
TM9SF1-202ENST00000396854 VSIG10Q8N0Z9 540 aa18.97■□□□□ 0.63
TM9SF1-202ENST00000396854 SMARCC1Q92922 1105 aaPredicted RBP18.97■□□□□ 0.63
TM9SF1-202ENST00000396854 BCL11BQ9C0K0 894 aaPredicted RBP18.97■□□□□ 0.63
TM9SF1-202ENST00000396854 TNS1Q9HBL0 1735 aaKnown RBP18.97■□□□□ 0.63
TM9SF1-202ENST00000396854 PTF1AQ7RTS3 328 aa18.96■□□□□ 0.63
TM9SF1-202ENST00000396854 SSH1Q8WYL5 1049 aa18.96■□□□□ 0.63
TM9SF1-202ENST00000396854 CHMP4AQ9BY43 222 aa18.96■□□□□ 0.63
TM9SF1-202ENST00000396854 PALLDQ8WX93 1383 aa18.96■□□□□ 0.63
TM9SF1-202ENST00000396854 BRPF1P55201 1214 aaPredicted RBP18.96■□□□□ 0.63
TM9SF1-202ENST00000396854 COL5A3P25940 1745 aaPredicted RBP18.95■□□□□ 0.62
TM9SF1-202ENST00000396854 PTCD1O75127 700 aaKnown RBP18.95■□□□□ 0.62
TM9SF1-202ENST00000396854 PRAMEF22A3QJZ6 481 aa18.94■□□□□ 0.62
TM9SF1-202ENST00000396854 BCAR3O75815 825 aa18.94■□□□□ 0.62
TM9SF1-202ENST00000396854 EXOC6Q8TAG9 804 aa18.94■□□□□ 0.62
TM9SF1-202ENST00000396854 HDGFL1Q5TGJ6 251 aa18.94■□□□□ 0.62
TM9SF1-202ENST00000396854 CCDC30Q5VVM6 783 aa18.94■□□□□ 0.62
TM9SF1-202ENST00000396854 SMC4Q9NTJ3 1288 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms