RNA–Protein interactions for RNA: ENST00000396843.2

SUPT5H-202, Transcript of SPT5 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT5H, Length 467 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT5H-202ENST00000396843 RREB1Q92766 1687 aa13.47□□□□□ -0.25
SUPT5H-202ENST00000396843 ATP6V1AP38606 617 aa13.46□□□□□ -0.25
SUPT5H-202ENST00000396843 DCTN1Q14203 1278 aa13.46□□□□□ -0.25
SUPT5H-202ENST00000396843 CCDC184Q52MB2 194 aa13.46□□□□□ -0.25
SUPT5H-202ENST00000396843 PLEKHF1Q96S99 279 aa13.46□□□□□ -0.25
SUPT5H-202ENST00000396843 TFCP2L1Q9NZI6 479 aa13.46□□□□□ -0.25
SUPT5H-202ENST00000396843 ATF5Q9Y2D1 282 aaPredicted RBP13.46□□□□□ -0.25
SUPT5H-202ENST00000396843 NUP188Q5SRE5 1749 aa13.46□□□□□ -0.25
SUPT5H-202ENST00000396843 MCM10Q7L590 875 aa13.45□□□□□ -0.26
SUPT5H-202ENST00000396843 LINC00116Q8NCU8 138 aa13.45□□□□□ -0.26
SUPT5H-202ENST00000396843 AMIGO3Q86WK7 504 aa13.44□□□□□ -0.26
SUPT5H-202ENST00000396843 CCDC146Q8IYE0 955 aa13.44□□□□□ -0.26
SUPT5H-202ENST00000396843 ADAMTS8Q9UP79 889 aa13.44□□□□□ -0.26
SUPT5H-202ENST00000396843 MAP3K5Q99683 1374 aa13.44□□□□□ -0.26
SUPT5H-202ENST00000396843 PNPLA7Q6ZV29 1317 aa13.42□□□□□ -0.26
SUPT5H-202ENST00000396843 SRCAPQ6ZRS2 3230 aa13.42□□□□□ -0.26
SUPT5H-202ENST00000396843 ITGB4P16144 1822 aa13.42□□□□□ -0.26
SUPT5H-202ENST00000396843 NEFMP07197 916 aa13.42□□□□□ -0.26
SUPT5H-202ENST00000396843 TEFQ10587 303 aa13.42□□□□□ -0.26
SUPT5H-202ENST00000396843 WDR43Q15061 677 aaKnown RBP eCLIP13.42□□□□□ -0.26
SUPT5H-202ENST00000396843 COL23A1Q86Y22 540 aaPredicted RBP13.42□□□□□ -0.26
SUPT5H-202ENST00000396843 RGPD3A6NKT7 1758 aaPredicted RBP13.42□□□□□ -0.26
SUPT5H-202ENST00000396843 RGPD4Q7Z3J3 1758 aa13.42□□□□□ -0.26
SUPT5H-202ENST00000396843 ANP32CO43423 234 aa13.41□□□□□ -0.26
SUPT5H-202ENST00000396843 KCNQ3O43525 872 aa13.41□□□□□ -0.26
SUPT5H-202ENST00000396843 PHF14O94880 888 aa13.41□□□□□ -0.26
SUPT5H-202ENST00000396843 RTF1Q92541 710 aaKnown RBP13.41□□□□□ -0.26
SUPT5H-202ENST00000396843 THUMPD2Q9BTF0 503 aaKnown RBP13.41□□□□□ -0.26
SUPT5H-202ENST00000396843 SPON1Q9HCB6 807 aa13.41□□□□□ -0.26
SUPT5H-202ENST00000396843 MIS18AQ9NYP9 233 aa13.41□□□□□ -0.26
SUPT5H-202ENST00000396843 RRP7AQ9Y3A4 280 aaKnown RBP13.41□□□□□ -0.26
SUPT5H-202ENST00000396843 NFE2L2Q16236 605 aa13.4□□□□□ -0.26
SUPT5H-202ENST00000396843 AK7Q96M32 723 aa13.4□□□□□ -0.26
SUPT5H-202ENST00000396843 PNNQ9H307 717 aaKnown RBP13.4□□□□□ -0.26
SUPT5H-202ENST00000396843 MAPK8IP3Q9UPT6 1336 aa13.39□□□□□ -0.27
SUPT5H-202ENST00000396843 SENP3-EIF4A1A0A087X0R7 540 aa13.39□□□□□ -0.27
SUPT5H-202ENST00000396843 BTBD11A6QL63 1104 aa13.39□□□□□ -0.27
SUPT5H-202ENST00000396843 GNPATO15228 680 aa13.39□□□□□ -0.27
SUPT5H-202ENST00000396843 NEUROD2Q15784 382 aa13.39□□□□□ -0.27
SUPT5H-202ENST00000396843 DNAJC10Q8IXB1 793 aa13.39□□□□□ -0.27
SUPT5H-202ENST00000396843 HTATSF1O43719 755 aaKnown RBP13.38□□□□□ -0.27
SUPT5H-202ENST00000396843 PTGER2P43116 358 aa13.38□□□□□ -0.27
SUPT5H-202ENST00000396843 RIPK4P57078 832 aa13.38□□□□□ -0.27
SUPT5H-202ENST00000396843 MSL1Q68DK7 614 aa13.38□□□□□ -0.27
SUPT5H-202ENST00000396843 LY75O60449 1722 aa13.38□□□□□ -0.27
SUPT5H-202ENST00000396843 PAPPAQ13219 1627 aa13.38□□□□□ -0.27
SUPT5H-202ENST00000396843 CEMIPQ8WUJ3 1361 aa13.37□□□□□ -0.27
SUPT5H-202ENST00000396843 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.37□□□□□ -0.27
SUPT5H-202ENST00000396843 TMPOP42166 694 aaKnown RBP13.37□□□□□ -0.27
SUPT5H-202ENST00000396843 ZNF790Q6PG37 636 aa13.37□□□□□ -0.27
SUPT5H-202ENST00000396843 TTC5Q8N0Z6 440 aa13.37□□□□□ -0.27
SUPT5H-202ENST00000396843 RUNDC1Q96C34 613 aa13.37□□□□□ -0.27
SUPT5H-202ENST00000396843 ZNF496Q96IT1 587 aaPredicted RBP13.37□□□□□ -0.27
SUPT5H-202ENST00000396843 MTFR1LQ9H019 292 aa13.37□□□□□ -0.27
SUPT5H-202ENST00000396843 CRKLP46109 303 aaKnown RBP13.36□□□□□ -0.27
SUPT5H-202ENST00000396843 TAF7Q15545 349 aaPredicted RBP13.36□□□□□ -0.27
SUPT5H-202ENST00000396843 INTS5Q6P9B9 1019 aaKnown RBP13.36□□□□□ -0.27
SUPT5H-202ENST00000396843 PPP1R1BQ9UD71 204 aaPredicted RBP13.36□□□□□ -0.27
SUPT5H-202ENST00000396843 CYP19A1P11511 503 aaPredicted RBP13.35□□□□□ -0.27
SUPT5H-202ENST00000396843 RC3H1Q5TC82 1133 aaKnown RBP13.35□□□□□ -0.27
SUPT5H-202ENST00000396843 MRS2Q9HD23 443 aa13.35□□□□□ -0.27
SUPT5H-202ENST00000396843 PRAMEF22A3QJZ6 481 aa13.34□□□□□ -0.27
SUPT5H-202ENST00000396843 RPS6KA4O75676 772 aa13.34□□□□□ -0.27
SUPT5H-202ENST00000396843 HMGB2P26583 209 aaKnown RBP13.34□□□□□ -0.27
SUPT5H-202ENST00000396843 TRAPPC3LQ5T215 181 aa13.34□□□□□ -0.27
SUPT5H-202ENST00000396843 FLAD1Q8NFF5 587 aa13.34□□□□□ -0.27
SUPT5H-202ENST00000396843 PNISRQ8TF01 805 aaKnown RBP13.34□□□□□ -0.27
SUPT5H-202ENST00000396843 SLC16A10Q8TF71 515 aa13.34□□□□□ -0.27
SUPT5H-202ENST00000396843 ARHGEF1Q92888 912 aaKnown RBP13.34□□□□□ -0.27
SUPT5H-202ENST00000396843 SGIP1Q9BQI5 828 aa13.34□□□□□ -0.27
SUPT5H-202ENST00000396843 RTCBQ9Y3I0 505 aaKnown RBP13.34□□□□□ -0.27
SUPT5H-202ENST00000396843 SCN11AQ9UI33 1791 aa13.34□□□□□ -0.27
SUPT5H-202ENST00000396843 MRC1P22897 1456 aa13.34□□□□□ -0.27
SUPT5H-202ENST00000396843 APAF1O14727 1248 aa13.33□□□□□ -0.28
SUPT5H-202ENST00000396843 SSFA2P28290 1259 aa13.33□□□□□ -0.28
SUPT5H-202ENST00000396843 CANXP27824 592 aaKnown RBP13.32□□□□□ -0.28
SUPT5H-202ENST00000396843 FMNL2Q96PY5 1086 aa13.32□□□□□ -0.28
SUPT5H-202ENST00000396843 CCDC87Q9NVE4 849 aa13.32□□□□□ -0.28
SUPT5H-202ENST00000396843 TRIM35Q9UPQ4 493 aa13.32□□□□□ -0.28
SUPT5H-202ENST00000396843 USP16Q9Y5T5 823 aa13.32□□□□□ -0.28
SUPT5H-202ENST00000396843 C4BP0C0L5 1744 aa13.32□□□□□ -0.28
SUPT5H-202ENST00000396843 CNTNAP4Q9C0A0 1308 aa13.32□□□□□ -0.28
SUPT5H-202ENST00000396843 CASZ1Q86V15 1759 aa13.32□□□□□ -0.28
SUPT5H-202ENST00000396843 C5P01031 1676 aa13.31□□□□□ -0.28
SUPT5H-202ENST00000396843 ADAMTS7Q9UKP4 1686 aa13.31□□□□□ -0.28
SUPT5H-202ENST00000396843 KCPQ6ZWJ8 1503 aa13.31□□□□□ -0.28
SUPT5H-202ENST00000396843 A1BGP04217 495 aa13.31□□□□□ -0.28
SUPT5H-202ENST00000396843 VSIG10Q8N0Z9 540 aa13.31□□□□□ -0.28
SUPT5H-202ENST00000396843 ARXQ96QS3 562 aa13.31□□□□□ -0.28
SUPT5H-202ENST00000396843 SRP68Q9UHB9 627 aaKnown RBP13.31□□□□□ -0.28
SUPT5H-202ENST00000396843 HEG1Q9ULI3 1381 aa13.31□□□□□ -0.28
SUPT5H-202ENST00000396843 STARD3NLO95772 234 aa13.3□□□□□ -0.28
SUPT5H-202ENST00000396843 POLD1P28340 1107 aa13.3□□□□□ -0.28
SUPT5H-202ENST00000396843 RFC4P35249 363 aa13.3□□□□□ -0.28
SUPT5H-202ENST00000396843 PIP4K2AP48426 406 aaPredicted RBP13.3□□□□□ -0.28
SUPT5H-202ENST00000396843 KLHL34Q8N239 644 aa13.3□□□□□ -0.28
SUPT5H-202ENST00000396843 ZBTB1Q9Y2K1 713 aa13.3□□□□□ -0.28
SUPT5H-202ENST00000396843 LAS1LQ9Y4W2 734 aaKnown RBP13.3□□□□□ -0.28
SUPT5H-202ENST00000396843 FHDC1Q9C0D6 1143 aaPredicted RBP13.29□□□□□ -0.28
SUPT5H-202ENST00000396843 TAF1LQ8IZX4 1826 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms