RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 TEFQ10587 303 aa21.59■■□□□ 1.05
AP1S3-202ENST00000396653 PTF1AQ7RTS3 328 aa21.59■■□□□ 1.05
AP1S3-202ENST00000396653 PIGBQ92521 554 aa21.59■■□□□ 1.05
AP1S3-202ENST00000396653 KDM3BQ7LBC6 1761 aa21.59■■□□□ 1.05
AP1S3-202ENST00000396653 CCDC27Q2M243 656 aa21.58■■□□□ 1.05
AP1S3-202ENST00000396653 MCM10Q7L590 875 aa21.58■■□□□ 1.05
AP1S3-202ENST00000396653 TRIM35Q9UPQ4 493 aa21.58■■□□□ 1.05
AP1S3-202ENST00000396653 ZNF831Q5JPB2 1677 aa21.58■■□□□ 1.05
AP1S3-202ENST00000396653 PLSCR1O15162 318 aa21.57■■□□□ 1.04
AP1S3-202ENST00000396653 APBA3O96018 575 aa21.57■■□□□ 1.04
AP1S3-202ENST00000396653 BAG6P46379 1132 aa21.57■■□□□ 1.04
AP1S3-202ENST00000396653 DCTN1Q14203 1278 aa21.57■■□□□ 1.04
AP1S3-202ENST00000396653 NEUROD2Q15784 382 aa21.57■■□□□ 1.04
AP1S3-202ENST00000396653 NFATC2IPQ8NCF5 419 aa21.57■■□□□ 1.04
AP1S3-202ENST00000396653 CICQ96RK0 1608 aaPredicted RBP21.56■■□□□ 1.04
AP1S3-202ENST00000396653 SOCS7O14512 581 aa21.56■■□□□ 1.04
AP1S3-202ENST00000396653 SMARCC1Q92922 1105 aaPredicted RBP21.56■■□□□ 1.04
AP1S3-202ENST00000396653 PALLDQ8WX93 1383 aa21.54■■□□□ 1.04
AP1S3-202ENST00000396653 NUP188Q5SRE5 1749 aa21.52■■□□□ 1.04
AP1S3-202ENST00000396653 KCPQ6ZWJ8 1503 aa21.52■■□□□ 1.04
AP1S3-202ENST00000396653 CALD1Q05682 793 aaKnown RBP21.52■■□□□ 1.04
AP1S3-202ENST00000396653 TAF7Q15545 349 aaPredicted RBP21.52■■□□□ 1.04
AP1S3-202ENST00000396653 THUMPD2Q9BTF0 503 aaKnown RBP21.52■■□□□ 1.04
AP1S3-202ENST00000396653 ATG3Q9NT62 314 aa21.52■■□□□ 1.04
AP1S3-202ENST00000396653 TAF1LQ8IZX4 1826 aa21.52■■□□□ 1.04
AP1S3-202ENST00000396653 BABAM1Q9NWV8 329 aa21.51■■□□□ 1.03
AP1S3-202ENST00000396653 WWC1Q8IX03 1113 aa21.5■■□□□ 1.03
AP1S3-202ENST00000396653 CAMKK2Q96RR4 588 aa21.5■■□□□ 1.03
AP1S3-202ENST00000396653 ASAP1Q9ULH1 1129 aa21.5■■□□□ 1.03
AP1S3-202ENST00000396653 C5P01031 1676 aa21.5■■□□□ 1.03
AP1S3-202ENST00000396653 BTBD11A6QL63 1104 aa21.49■■□□□ 1.03
AP1S3-202ENST00000396653 EN1Q05925 392 aaPredicted RBP21.49■■□□□ 1.03
AP1S3-202ENST00000396653 DEFB132Q7Z7B7 95 aa21.49■■□□□ 1.03
AP1S3-202ENST00000396653 TJP1Q07157 1748 aa21.49■■□□□ 1.03
AP1S3-202ENST00000396653 SLC27A3Q5K4L6 730 aa21.48■■□□□ 1.03
AP1S3-202ENST00000396653 COL5A3P25940 1745 aaPredicted RBP21.48■■□□□ 1.03
AP1S3-202ENST00000396653 ZNF790Q6PG37 636 aa21.47■■□□□ 1.03
AP1S3-202ENST00000396653 TTC5Q8N0Z6 440 aa21.47■■□□□ 1.03
AP1S3-202ENST00000396653 IL16Q14005 1332 aa21.47■■□□□ 1.03
AP1S3-202ENST00000396653 HMGB2P26583 209 aaKnown RBP21.46■■□□□ 1.03
AP1S3-202ENST00000396653 EZH2Q15910 746 aaKnown RBP21.46■■□□□ 1.03
AP1S3-202ENST00000396653 TXNRD1Q16881 649 aa21.46■■□□□ 1.03
AP1S3-202ENST00000396653 WDR63Q8IWG1 891 aa21.46■■□□□ 1.03
AP1S3-202ENST00000396653 LAMB4A4D0S4 1761 aa21.46■■□□□ 1.03
AP1S3-202ENST00000396653 LOC102724428A0A0B4J2F2 783 aa21.45■■□□□ 1.02
AP1S3-202ENST00000396653 SIK1P57059 783 aa21.45■■□□□ 1.02
AP1S3-202ENST00000396653 SLC39A6Q13433 755 aa21.45■■□□□ 1.02
AP1S3-202ENST00000396653 CFAP44Q96MT7 982 aa21.45■■□□□ 1.02
AP1S3-202ENST00000396653 IFT57Q9NWB7 429 aa21.45■■□□□ 1.02
AP1S3-202ENST00000396653 ZNF521Q96K83 1311 aa21.45■■□□□ 1.02
AP1S3-202ENST00000396653 PROM2Q8N271 834 aa21.44■■□□□ 1.02
AP1S3-202ENST00000396653 SENP3-EIF4A1A0A087X0R7 540 aa21.43■■□□□ 1.02
AP1S3-202ENST00000396653 CHL1O00533 1208 aa21.43■■□□□ 1.02
AP1S3-202ENST00000396653 ZNF853P0CG23 659 aa21.43■■□□□ 1.02
AP1S3-202ENST00000396653 GNAI1P63096 354 aa21.43■■□□□ 1.02
AP1S3-202ENST00000396653 VSIG10Q8N0Z9 540 aa21.43■■□□□ 1.02
AP1S3-202ENST00000396653 TSPYL4Q9UJ04 414 aa21.43■■□□□ 1.02
AP1S3-202ENST00000396653 CCNL1Q9UK58 526 aaPredicted RBP21.43■■□□□ 1.02
AP1S3-202ENST00000396653 SALL2Q9Y467 1007 aaPredicted RBP21.43■■□□□ 1.02
AP1S3-202ENST00000396653 FMNL2Q96PY5 1086 aa21.42■■□□□ 1.02
AP1S3-202ENST00000396653 HEG1Q9ULI3 1381 aa21.42■■□□□ 1.02
AP1S3-202ENST00000396653 C4BP0C0L5 1744 aa21.41■■□□□ 1.02
AP1S3-202ENST00000396653 QSER1Q2KHR3 1735 aa21.41■■□□□ 1.02
AP1S3-202ENST00000396653 RBM42Q9BTD8 480 aaKnown RBP21.41■■□□□ 1.02
AP1S3-202ENST00000396653 KCNQ3O43525 872 aa21.4■■□□□ 1.02
AP1S3-202ENST00000396653 PTCD1O75127 700 aaKnown RBP21.4■■□□□ 1.02
AP1S3-202ENST00000396653 ZNF496Q96IT1 587 aaPredicted RBP21.4■■□□□ 1.02
AP1S3-202ENST00000396653 SLC4A9Q96Q91 983 aa21.4■■□□□ 1.02
AP1S3-202ENST00000396653 LRRC4BQ9NT99 713 aa21.4■■□□□ 1.02
AP1S3-202ENST00000396653 MIS18AQ9NYP9 233 aa21.4■■□□□ 1.02
AP1S3-202ENST00000396653 ATP6V1AP38606 617 aa21.39■■□□□ 1.01
AP1S3-202ENST00000396653 EIF4A1P60842 406 aaKnown RBP21.38■■□□□ 1.01
AP1S3-202ENST00000396653 HNRNPUQ00839 825 aaKnown RBP eCLIP21.38■■□□□ 1.01
AP1S3-202ENST00000396653 MBIPQ9NS73 344 aa21.38■■□□□ 1.01
AP1S3-202ENST00000396653 LAS1LQ9Y4W2 734 aaKnown RBP21.38■■□□□ 1.01
AP1S3-202ENST00000396653 TUBGCP6Q96RT7 1819 aa21.37■■□□□ 1.01
AP1S3-202ENST00000396653 ITPK1Q13572 414 aa21.37■■□□□ 1.01
AP1S3-202ENST00000396653 UBR3Q6ZT12 1888 aa21.37■■□□□ 1.01
AP1S3-202ENST00000396653 MYH14Q7Z406 1995 aaKnown RBP21.36■■□□□ 1.01
AP1S3-202ENST00000396653 TEX13AQ9BXU3 409 aaPredicted RBP21.36■■□□□ 1.01
AP1S3-202ENST00000396653 SNRPA1P09661 255 aaKnown RBP21.35■■□□□ 1.01
AP1S3-202ENST00000396653 GOLGA2Q08379 1002 aa21.35■■□□□ 1.01
AP1S3-202ENST00000396653 ZBED9Q6R2W3 1325 aa21.34■■□□□ 1.01
AP1S3-202ENST00000396653 CNTNAP4Q9C0A0 1308 aa21.34■■□□□ 1.01
AP1S3-202ENST00000396653 MYH16Q9H6N6 1097 aa21.34■■□□□ 1.01
AP1S3-202ENST00000396653 KCNQ4P56696 695 aa21.33■■□□□ 1.01
AP1S3-202ENST00000396653 DNAJC10Q8IXB1 793 aa21.33■■□□□ 1.01
AP1S3-202ENST00000396653 LINC00116Q8NCU8 138 aa21.33■■□□□ 1.01
AP1S3-202ENST00000396653 FANCIQ9NVI1 1328 aa21.32■■□□□ 1
AP1S3-202ENST00000396653 E9PSI1 815 aa21.32■■□□□ 1
AP1S3-202ENST00000396653 GIGYF1O75420 1035 aaPredicted RBP21.32■■□□□ 1
AP1S3-202ENST00000396653 HOXB7P09629 217 aa21.32■■□□□ 1
AP1S3-202ENST00000396653 RC3H1Q5TC82 1133 aaKnown RBP21.32■■□□□ 1
AP1S3-202ENST00000396653 NBPF14Q5TI25 921 aa21.32■■□□□ 1
AP1S3-202ENST00000396653 SOS1Q07889 1333 aaPredicted RBP21.31■■□□□ 1
AP1S3-202ENST00000396653 STARD3NLO95772 234 aa21.31■■□□□ 1
AP1S3-202ENST00000396653 CYP19A1P11511 503 aaPredicted RBP21.31■■□□□ 1
AP1S3-202ENST00000396653 AKT1S1Q96B36 256 aa21.31■■□□□ 1
AP1S3-202ENST00000396653 SPINK5Q9NQ38 1064 aaPredicted RBP21.31■■□□□ 1
AP1S3-202ENST00000396653 TSR2Q969E8 191 aaKnown RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 343.5 ms