RNA–Protein interactions for RNA: ENST00000396641.6

LRRC3B-201, Transcript of leucine rich repeat containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC3B, Length 1,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3B-201ENST00000396641 NFATC2IPQ8NCF5 419 aa27.29■■□□□ 1.96
LRRC3B-201ENST00000396641 ZNF428Q96B54 188 aa27.27■■□□□ 1.96
LRRC3B-201ENST00000396641 THSD7AQ9UPZ6 1657 aa27.27■■□□□ 1.96
LRRC3B-201ENST00000396641 MARCH10Q8NA82 808 aaPredicted RBP27.26■■□□□ 1.95
LRRC3B-201ENST00000396641 SUPT16HQ9Y5B9 1047 aaKnown RBP27.26■■□□□ 1.95
LRRC3B-201ENST00000396641 SIPA1L3O60292 1781 aaPredicted RBP27.26■■□□□ 1.95
LRRC3B-201ENST00000396641 A0A0G2JS52 829 aa27.25■■□□□ 1.95
LRRC3B-201ENST00000396641 MYT1Q01538 1121 aa27.25■■□□□ 1.95
LRRC3B-201ENST00000396641 VAMP4O75379 141 aa27.24■■□□□ 1.95
LRRC3B-201ENST00000396641 TWISTNBQ3B726 338 aaPredicted RBP27.24■■□□□ 1.95
LRRC3B-201ENST00000396641 C8orf58Q8NAV2 365 aa27.24■■□□□ 1.95
LRRC3B-201ENST00000396641 SOS1Q07889 1333 aaPredicted RBP27.23■■□□□ 1.95
LRRC3B-201ENST00000396641 RBM6P78332 1123 aaKnown RBP27.23■■□□□ 1.95
LRRC3B-201ENST00000396641 TSPYL6Q8N831 410 aa27.22■■□□□ 1.95
LRRC3B-201ENST00000396641 KDM3BQ7LBC6 1761 aa27.21■■□□□ 1.95
LRRC3B-201ENST00000396641 RARSP54136 660 aaKnown RBP27.21■■□□□ 1.95
LRRC3B-201ENST00000396641 ZNF790Q6PG37 636 aa27.21■■□□□ 1.95
LRRC3B-201ENST00000396641 EIF4A1P60842 406 aaKnown RBP27.21■■□□□ 1.95
LRRC3B-201ENST00000396641 SEPT12Q8IYM1 358 aa27.21■■□□□ 1.95
LRRC3B-201ENST00000396641 RNF123Q5XPI4 1314 aa27.2■■□□□ 1.95
LRRC3B-201ENST00000396641 TMOD3Q9NYL9 352 aa27.2■■□□□ 1.94
LRRC3B-201ENST00000396641 ELL2O00472 640 aaPredicted RBP27.19■■□□□ 1.94
LRRC3B-201ENST00000396641 KCNQ3O43525 872 aa27.17■■□□□ 1.94
LRRC3B-201ENST00000396641 ALDH1L2Q3SY69 923 aa27.17■■□□□ 1.94
LRRC3B-201ENST00000396641 TTC5Q8N0Z6 440 aa27.17■■□□□ 1.94
LRRC3B-201ENST00000396641 TOGARAM1Q9Y4F4 1720 aa27.17■■□□□ 1.94
LRRC3B-201ENST00000396641 HOXB7P09629 217 aa27.17■■□□□ 1.94
LRRC3B-201ENST00000396641 KRT24Q2M2I5 525 aa27.17■■□□□ 1.94
LRRC3B-201ENST00000396641 CHMP4AQ9BY43 222 aa27.17■■□□□ 1.94
LRRC3B-201ENST00000396641 HEG1Q9ULI3 1381 aa27.16■■□□□ 1.94
LRRC3B-201ENST00000396641 SLC39A6Q13433 755 aa27.16■■□□□ 1.94
LRRC3B-201ENST00000396641 PIGBQ92521 554 aa27.15■■□□□ 1.94
LRRC3B-201ENST00000396641 RXRBP28702 533 aa27.14■■□□□ 1.94
LRRC3B-201ENST00000396641 RGS17Q9UGC6 210 aaPredicted RBP27.14■■□□□ 1.94
LRRC3B-201ENST00000396641 BCL9O00512 1426 aa27.14■■□□□ 1.94
LRRC3B-201ENST00000396641 BCAR3O75815 825 aa27.14■■□□□ 1.93
LRRC3B-201ENST00000396641 PRIM1P49642 420 aaKnown RBP27.14■■□□□ 1.93
LRRC3B-201ENST00000396641 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.13■■□□□ 1.93
LRRC3B-201ENST00000396641 SSH1Q8WYL5 1049 aa27.13■■□□□ 1.93
LRRC3B-201ENST00000396641 BRPF1P55201 1214 aaPredicted RBP27.12■■□□□ 1.93
LRRC3B-201ENST00000396641 RRP1P56182 461 aaKnown RBP27.12■■□□□ 1.93
LRRC3B-201ENST00000396641 ITGB4P16144 1822 aa27.12■■□□□ 1.93
LRRC3B-201ENST00000396641 KAT6BQ8WYB5 2073 aa27.11■■□□□ 1.93
LRRC3B-201ENST00000396641 FMNL2Q96PY5 1086 aa27.11■■□□□ 1.93
LRRC3B-201ENST00000396641 GIGYF1O75420 1035 aaPredicted RBP27.11■■□□□ 1.93
LRRC3B-201ENST00000396641 SYTL4Q96C24 671 aaPredicted RBP27.11■■□□□ 1.93
LRRC3B-201ENST00000396641 SMC4Q9NTJ3 1288 aa27.11■■□□□ 1.93
LRRC3B-201ENST00000396641 ZNF496Q96IT1 587 aaPredicted RBP27.1■■□□□ 1.93
LRRC3B-201ENST00000396641 DOT1LQ8TEK3 1739 aa27.1■■□□□ 1.93
LRRC3B-201ENST00000396641 CCDC30Q5VVM6 783 aa27.08■■□□□ 1.93
LRRC3B-201ENST00000396641 ACSBG1Q96GR2 724 aa27.08■■□□□ 1.93
LRRC3B-201ENST00000396641 BCL2L13Q9BXK5 485 aa27.08■■□□□ 1.93
LRRC3B-201ENST00000396641 ATG3Q9NT62 314 aa27.08■■□□□ 1.92
LRRC3B-201ENST00000396641 NEFLP07196 543 aa27.07■■□□□ 1.92
LRRC3B-201ENST00000396641 SNRPA1P09661 255 aaKnown RBP27.07■■□□□ 1.92
LRRC3B-201ENST00000396641 KRT27Q7Z3Y8 459 aa27.07■■□□□ 1.92
LRRC3B-201ENST00000396641 ILDR1Q86SU0 546 aaPredicted RBP27.07■■□□□ 1.92
LRRC3B-201ENST00000396641 PAPPAQ13219 1627 aa27.07■■□□□ 1.92
LRRC3B-201ENST00000396641 ASAP1Q9ULH1 1129 aa27.06■■□□□ 1.92
LRRC3B-201ENST00000396641 HDGFL1Q5TGJ6 251 aa27.05■■□□□ 1.92
LRRC3B-201ENST00000396641 POTEAQ6S8J7 498 aa27.05■■□□□ 1.92
LRRC3B-201ENST00000396641 MRPL50Q8N5N7 158 aaKnown RBP27.05■■□□□ 1.92
LRRC3B-201ENST00000396641 KIF16BQ96L93 1317 aa27.04■■□□□ 1.92
LRRC3B-201ENST00000396641 UBR2Q8IWV8 1755 aa27.04■■□□□ 1.92
LRRC3B-201ENST00000396641 STK31Q9BXU1 1019 aa27.04■■□□□ 1.92
LRRC3B-201ENST00000396641 IPO8O15397 1037 aaKnown RBP27.02■■□□□ 1.92
LRRC3B-201ENST00000396641 PLIN1O60240 522 aa27.02■■□□□ 1.92
LRRC3B-201ENST00000396641 FAM196AQ6ZSG2 479 aa27.02■■□□□ 1.92
LRRC3B-201ENST00000396641 VSIG10Q8N0Z9 540 aa27.02■■□□□ 1.92
LRRC3B-201ENST00000396641 KCPQ6ZWJ8 1503 aa27.02■■□□□ 1.92
LRRC3B-201ENST00000396641 KCNQ2O43526 872 aa27.01■■□□□ 1.92
LRRC3B-201ENST00000396641 EIF2S2P20042 333 aaKnown RBP27.01■■□□□ 1.92
LRRC3B-201ENST00000396641 FRAT1Q92837 279 aaPredicted RBP27.01■■□□□ 1.92
LRRC3B-201ENST00000396641 PTCD1O75127 700 aaKnown RBP27.01■■□□□ 1.91
LRRC3B-201ENST00000396641 SLC4A2P04920 1241 aa27.01■■□□□ 1.91
LRRC3B-201ENST00000396641 CANXP27824 592 aaKnown RBP27.01■■□□□ 1.91
LRRC3B-201ENST00000396641 FAM182BQ5T319 152 aa27.01■■□□□ 1.91
LRRC3B-201ENST00000396641 ARHGAP45Q92619 1136 aa27.01■■□□□ 1.91
LRRC3B-201ENST00000396641 TCERG1O14776 1098 aaKnown RBP27■■□□□ 1.91
LRRC3B-201ENST00000396641 ZKSCAN2Q63HK3 967 aa27■■□□□ 1.91
LRRC3B-201ENST00000396641 SMARCC1Q92922 1105 aaPredicted RBP27■■□□□ 1.91
LRRC3B-201ENST00000396641 TEX13AQ9BXU3 409 aaPredicted RBP27■■□□□ 1.91
LRRC3B-201ENST00000396641 NOB1Q9ULX3 412 aaKnown RBP27■■□□□ 1.91
LRRC3B-201ENST00000396641 BRWD3Q6RI45 1802 aa26.99■■□□□ 1.91
LRRC3B-201ENST00000396641 PRAMEF22A3QJZ6 481 aa26.99■■□□□ 1.91
LRRC3B-201ENST00000396641 PDE3AQ14432 1141 aa26.98■■□□□ 1.91
LRRC3B-201ENST00000396641 CACNA1FO60840 1977 aa26.98■■□□□ 1.91
LRRC3B-201ENST00000396641 DBF4Q9UBU7 674 aaPredicted RBP26.98■■□□□ 1.91
LRRC3B-201ENST00000396641 MS4A1P11836 297 aa26.97■■□□□ 1.91
LRRC3B-201ENST00000396641 NECTIN2Q92692 538 aa26.97■■□□□ 1.91
LRRC3B-201ENST00000396641 USP16Q9Y5T5 823 aa26.97■■□□□ 1.91
LRRC3B-201ENST00000396641 ATF7IPQ6VMQ6 1270 aa26.96■■□□□ 1.91
LRRC3B-201ENST00000396641 RBM42Q9BTD8 480 aaKnown RBP26.96■■□□□ 1.91
LRRC3B-201ENST00000396641 RGS12O14924 1447 aa26.96■■□□□ 1.91
LRRC3B-201ENST00000396641 NHSQ6T4R5 1651 aa26.95■■□□□ 1.91
LRRC3B-201ENST00000396641 PTPRCP08575 1304 aa26.95■■□□□ 1.9
LRRC3B-201ENST00000396641 FKBP8Q14318 412 aa26.94■■□□□ 1.9
LRRC3B-201ENST00000396641 BCL11BQ9C0K0 894 aaPredicted RBP26.94■■□□□ 1.9
LRRC3B-201ENST00000396641 GTF3C3Q9Y5Q9 886 aa26.94■■□□□ 1.9
LRRC3B-201ENST00000396641 ERICH6BQ5W0A0 696 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms