RNA–Protein interactions for RNA: ENST00000396394.6

PSMA1-201, Transcript of proteasome subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMA1, Length 1,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA1-201ENST00000396394 PNPLA7Q6ZV29 1317 aa16.98■□□□□ 0.31
PSMA1-201ENST00000396394 ITGB4P16144 1822 aa16.97■□□□□ 0.31
PSMA1-201ENST00000396394 HMOX1P09601 288 aa16.96■□□□□ 0.31
PSMA1-201ENST00000396394 ASAP1Q9ULH1 1129 aa16.96■□□□□ 0.31
PSMA1-201ENST00000396394 LOC102724428A0A0B4J2F2 783 aa16.96■□□□□ 0.3
PSMA1-201ENST00000396394 SIK1P57059 783 aa16.96■□□□□ 0.3
PSMA1-201ENST00000396394 AKAP4Q5JQC9 854 aa16.96■□□□□ 0.3
PSMA1-201ENST00000396394 CFAP53Q96M91 514 aa16.96■□□□□ 0.3
PSMA1-201ENST00000396394 SGIP1Q9BQI5 828 aa16.96■□□□□ 0.3
PSMA1-201ENST00000396394 ATG3Q9NT62 314 aa16.96■□□□□ 0.3
PSMA1-201ENST00000396394 CABP4P57796 275 aa16.95■□□□□ 0.3
PSMA1-201ENST00000396394 FLAD1Q8NFF5 587 aa16.95■□□□□ 0.3
PSMA1-201ENST00000396394 COL3A1P02461 1466 aaPredicted RBP16.94■□□□□ 0.3
PSMA1-201ENST00000396394 PPP2R1AP30153 589 aa16.94■□□□□ 0.3
PSMA1-201ENST00000396394 QSER1Q2KHR3 1735 aa16.94■□□□□ 0.3
PSMA1-201ENST00000396394 KDM6AO15550 1401 aaPredicted RBP16.94■□□□□ 0.3
PSMA1-201ENST00000396394 U2SURPO15042 1029 aaKnown RBP16.92■□□□□ 0.3
PSMA1-201ENST00000396394 ATP6V1AP38606 617 aa16.92■□□□□ 0.3
PSMA1-201ENST00000396394 MTHFSDQ2M296 383 aaKnown RBP16.91■□□□□ 0.3
PSMA1-201ENST00000396394 COL23A1Q86Y22 540 aaPredicted RBP16.91■□□□□ 0.3
PSMA1-201ENST00000396394 NFATC2IPQ8NCF5 419 aa16.91■□□□□ 0.3
PSMA1-201ENST00000396394 NUDCQ9Y266 331 aa16.91■□□□□ 0.3
PSMA1-201ENST00000396394 AK7Q96M32 723 aa16.91■□□□□ 0.3
PSMA1-201ENST00000396394 ARXQ96QS3 562 aa16.91■□□□□ 0.3
PSMA1-201ENST00000396394 C5P01031 1676 aa16.9■□□□□ 0.3
PSMA1-201ENST00000396394 POLD1P28340 1107 aa16.9■□□□□ 0.3
PSMA1-201ENST00000396394 MSH5O43196 834 aa16.89■□□□□ 0.29
PSMA1-201ENST00000396394 ITPK1Q13572 414 aa16.89■□□□□ 0.29
PSMA1-201ENST00000396394 LINC00116Q8NCU8 138 aa16.89■□□□□ 0.29
PSMA1-201ENST00000396394 TAF1LQ8IZX4 1826 aa16.88■□□□□ 0.29
PSMA1-201ENST00000396394 RNMTO43148 476 aaKnown RBP16.88■□□□□ 0.29
PSMA1-201ENST00000396394 RBM42Q9BTD8 480 aaKnown RBP16.88■□□□□ 0.29
PSMA1-201ENST00000396394 SLC52A2Q9HAB3 445 aa16.88■□□□□ 0.29
PSMA1-201ENST00000396394 LGR6Q9HBX8 967 aa16.88■□□□□ 0.29
PSMA1-201ENST00000396394 C4BP0C0L5 1744 aa16.88■□□□□ 0.29
PSMA1-201ENST00000396394 SSFA2P28290 1259 aa16.87■□□□□ 0.29
PSMA1-201ENST00000396394 GAS2L2Q8NHY3 880 aa16.87■□□□□ 0.29
PSMA1-201ENST00000396394 SYT17Q9BSW7 474 aa16.87■□□□□ 0.29
PSMA1-201ENST00000396394 FHDC1Q9C0D6 1143 aaPredicted RBP16.87■□□□□ 0.29
PSMA1-201ENST00000396394 DCAF8L1A6NGE4 600 aa16.86■□□□□ 0.29
PSMA1-201ENST00000396394 SLC4A9Q96Q91 983 aa16.86■□□□□ 0.29
PSMA1-201ENST00000396394 TUBGCP6Q96RT7 1819 aa16.86■□□□□ 0.29
PSMA1-201ENST00000396394 FCHSD2O94868 740 aa16.86■□□□□ 0.29
PSMA1-201ENST00000396394 RC3H1Q5TC82 1133 aaKnown RBP16.86■□□□□ 0.29
PSMA1-201ENST00000396394 MAP3K5Q99683 1374 aa16.85■□□□□ 0.29
PSMA1-201ENST00000396394 ZNF831Q5JPB2 1677 aa16.85■□□□□ 0.29
PSMA1-201ENST00000396394 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.85■□□□□ 0.29
PSMA1-201ENST00000396394 RSPH6AQ9H0K4 717 aa16.85■□□□□ 0.29
PSMA1-201ENST00000396394 COL24A1Q17RW2 1714 aa16.85■□□□□ 0.29
PSMA1-201ENST00000396394 GNAT3A8MTJ3 354 aa16.84■□□□□ 0.29
PSMA1-201ENST00000396394 U2AF1L5P0DN76 240 aaPredicted RBP16.84■□□□□ 0.29
PSMA1-201ENST00000396394 PRKAR2BP31323 418 aa16.84■□□□□ 0.29
PSMA1-201ENST00000396394 U2AF1Q01081 240 aaKnown RBP eCLIP16.84■□□□□ 0.29
PSMA1-201ENST00000396394 SCN11AQ9UI33 1791 aa16.83■□□□□ 0.29
PSMA1-201ENST00000396394 CNTNAP4Q9C0A0 1308 aa16.83■□□□□ 0.28
PSMA1-201ENST00000396394 GNPATO15228 680 aa16.83■□□□□ 0.28
PSMA1-201ENST00000396394 PTCD1O75127 700 aaKnown RBP16.83■□□□□ 0.28
PSMA1-201ENST00000396394 AMIGO3Q86WK7 504 aa16.83■□□□□ 0.28
PSMA1-201ENST00000396394 MRC1P22897 1456 aa16.82■□□□□ 0.28
PSMA1-201ENST00000396394 PHF14O94880 888 aa16.82■□□□□ 0.28
PSMA1-201ENST00000396394 PHACTR3Q96KR7 559 aa16.82■□□□□ 0.28
PSMA1-201ENST00000396394 RTCBQ9Y3I0 505 aaKnown RBP16.82■□□□□ 0.28
PSMA1-201ENST00000396394 RNF123Q5XPI4 1314 aa16.81■□□□□ 0.28
PSMA1-201ENST00000396394 TRAPPC3LQ5T215 181 aa16.81■□□□□ 0.28
PSMA1-201ENST00000396394 ADAMTS7Q9UKP4 1686 aa16.81■□□□□ 0.28
PSMA1-201ENST00000396394 ADRA2BP18089 450 aa16.8■□□□□ 0.28
PSMA1-201ENST00000396394 IL17REQ8NFR9 667 aa16.8■□□□□ 0.28
PSMA1-201ENST00000396394 UBR3Q6ZT12 1888 aa16.8■□□□□ 0.28
PSMA1-201ENST00000396394 RPS6KA4O75676 772 aa16.8■□□□□ 0.28
PSMA1-201ENST00000396394 MSL1Q68DK7 614 aa16.8■□□□□ 0.28
PSMA1-201ENST00000396394 TEFQ10587 303 aa16.79■□□□□ 0.28
PSMA1-201ENST00000396394 SMIM5Q71RC9 77 aa16.79■□□□□ 0.28
PSMA1-201ENST00000396394 VSIG10Q8N0Z9 540 aa16.79■□□□□ 0.28
PSMA1-201ENST00000396394 SLC39A6Q13433 755 aa16.78■□□□□ 0.28
PSMA1-201ENST00000396394 CEMIPQ8WUJ3 1361 aa16.78■□□□□ 0.28
PSMA1-201ENST00000396394 CRKLP46109 303 aaKnown RBP16.77■□□□□ 0.28
PSMA1-201ENST00000396394 ARHGEF1Q92888 912 aaKnown RBP16.77■□□□□ 0.28
PSMA1-201ENST00000396394 HTATSF1O43719 755 aaKnown RBP16.76■□□□□ 0.27
PSMA1-201ENST00000396394 NEFMP07197 916 aa16.76■□□□□ 0.27
PSMA1-201ENST00000396394 TTC5Q8N0Z6 440 aa16.76■□□□□ 0.27
PSMA1-201ENST00000396394 PNNQ9H307 717 aaKnown RBP16.76■□□□□ 0.27
PSMA1-201ENST00000396394 PPP4R2Q9NY27 417 aa16.76■□□□□ 0.27
PSMA1-201ENST00000396394 RFC4P35249 363 aa16.75■□□□□ 0.27
PSMA1-201ENST00000396394 KLHL34Q8N239 644 aa16.75■□□□□ 0.27
PSMA1-201ENST00000396394 NLGN1Q8N2Q7 840 aa16.75■□□□□ 0.27
PSMA1-201ENST00000396394 RTF1Q92541 710 aaKnown RBP16.75■□□□□ 0.27
PSMA1-201ENST00000396394 CD2APQ9Y5K6 639 aa16.75■□□□□ 0.27
PSMA1-201ENST00000396394 CICQ96RK0 1608 aaPredicted RBP16.75■□□□□ 0.27
PSMA1-201ENST00000396394 COL5A3P25940 1745 aaPredicted RBP16.75■□□□□ 0.27
PSMA1-201ENST00000396394 INTS5Q6P9B9 1019 aaKnown RBP16.75■□□□□ 0.27
PSMA1-201ENST00000396394 ZNF790Q6PG37 636 aa16.75■□□□□ 0.27
PSMA1-201ENST00000396394 DNAJC10Q8IXB1 793 aa16.75■□□□□ 0.27
PSMA1-201ENST00000396394 TSHZ2Q9NRE2 1034 aa16.75■□□□□ 0.27
PSMA1-201ENST00000396394 CYP19A1P11511 503 aaPredicted RBP16.74■□□□□ 0.27
PSMA1-201ENST00000396394 PLEKHF1Q96S99 279 aa16.73■□□□□ 0.27
PSMA1-201ENST00000396394 TEX13AQ9BXU3 409 aaPredicted RBP16.73■□□□□ 0.27
PSMA1-201ENST00000396394 CCDC87Q9NVE4 849 aa16.73■□□□□ 0.27
PSMA1-201ENST00000396394 KCPQ6ZWJ8 1503 aa16.73■□□□□ 0.27
PSMA1-201ENST00000396394 VIRMAQ69YN4 1812 aaKnown RBP16.72■□□□□ 0.27
PSMA1-201ENST00000396394 UTRNP46939 3433 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms