RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 HMOX1P09601 288 aa24.84■■□□□ 1.57
FXN-203ENST00000396366 ATP6V1AP38606 617 aa24.84■■□□□ 1.57
FXN-203ENST00000396366 PHF14O94880 888 aa24.83■■□□□ 1.57
FXN-203ENST00000396366 UTRNP46939 3433 aa24.82■■□□□ 1.56
FXN-203ENST00000396366 YY1P25490 414 aa24.82■■□□□ 1.56
FXN-203ENST00000396366 C1orf141Q5JVX7 400 aa24.82■■□□□ 1.56
FXN-203ENST00000396366 SLC4A9Q96Q91 983 aa24.82■■□□□ 1.56
FXN-203ENST00000396366 MAP3K5Q99683 1374 aa24.81■■□□□ 1.56
FXN-203ENST00000396366 UBR3Q6ZT12 1888 aa24.81■■□□□ 1.56
FXN-203ENST00000396366 CABP4P57796 275 aa24.81■■□□□ 1.56
FXN-203ENST00000396366 FLAD1Q8NFF5 587 aa24.81■■□□□ 1.56
FXN-203ENST00000396366 DIAPH1O60610 1272 aaKnown RBP24.8■■□□□ 1.56
FXN-203ENST00000396366 HMGB2P26583 209 aaKnown RBP24.8■■□□□ 1.56
FXN-203ENST00000396366 RBM42Q9BTD8 480 aaKnown RBP24.8■■□□□ 1.56
FXN-203ENST00000396366 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.79■■□□□ 1.56
FXN-203ENST00000396366 NFATC2IPQ8NCF5 419 aa24.79■■□□□ 1.56
FXN-203ENST00000396366 NLGN2Q8NFZ4 835 aa24.79■■□□□ 1.56
FXN-203ENST00000396366 NPC1L1Q9UHC9 1359 aa24.79■■□□□ 1.56
FXN-203ENST00000396366 GNPATO15228 680 aa24.76■■□□□ 1.55
FXN-203ENST00000396366 LGR6Q9HBX8 967 aa24.76■■□□□ 1.55
FXN-203ENST00000396366 SSFA2P28290 1259 aa24.74■■□□□ 1.55
FXN-203ENST00000396366 MTHFSDQ2M296 383 aaKnown RBP24.74■■□□□ 1.55
FXN-203ENST00000396366 AKAP4Q5JQC9 854 aa24.74■■□□□ 1.55
FXN-203ENST00000396366 COL3A1P02461 1466 aaPredicted RBP24.74■■□□□ 1.55
FXN-203ENST00000396366 SCN11AQ9UI33 1791 aa24.74■■□□□ 1.55
FXN-203ENST00000396366 PTCD1O75127 700 aaKnown RBP24.73■■□□□ 1.55
FXN-203ENST00000396366 GPR162Q16538 588 aa24.72■■□□□ 1.55
FXN-203ENST00000396366 U2SURPO15042 1029 aaKnown RBP24.71■■□□□ 1.55
FXN-203ENST00000396366 PELP1Q8IZL8 1130 aaKnown RBP24.71■■□□□ 1.55
FXN-203ENST00000396366 GOLGB1Q14789 3259 aaKnown RBP24.71■■□□□ 1.55
FXN-203ENST00000396366 COL5A3P25940 1745 aaPredicted RBP24.69■■□□□ 1.54
FXN-203ENST00000396366 ZNF831Q5JPB2 1677 aa24.69■■□□□ 1.54
FXN-203ENST00000396366 VIRMAQ69YN4 1812 aaKnown RBP24.68■■□□□ 1.54
FXN-203ENST00000396366 RNMTO43148 476 aaKnown RBP24.68■■□□□ 1.54
FXN-203ENST00000396366 SLC52A2Q9HAB3 445 aa24.68■■□□□ 1.54
FXN-203ENST00000396366 TRAPPC3LQ5T215 181 aa24.67■■□□□ 1.54
FXN-203ENST00000396366 RTCBQ9Y3I0 505 aaKnown RBP24.67■■□□□ 1.54
FXN-203ENST00000396366 MYH14Q7Z406 1995 aaKnown RBP24.67■■□□□ 1.54
FXN-203ENST00000396366 RC3H1Q5TC82 1133 aaKnown RBP24.66■■□□□ 1.54
FXN-203ENST00000396366 CNTNAP4Q9C0A0 1308 aa24.65■■□□□ 1.54
FXN-203ENST00000396366 SLC39A6Q13433 755 aa24.65■■□□□ 1.54
FXN-203ENST00000396366 ARHGEF1Q92888 912 aaKnown RBP24.65■■□□□ 1.54
FXN-203ENST00000396366 CD2APQ9Y5K6 639 aa24.65■■□□□ 1.54
FXN-203ENST00000396366 RPS6KA4O75676 772 aa24.64■■□□□ 1.54
FXN-203ENST00000396366 YBX3P16989 372 aaKnown RBP eCLIP24.64■■□□□ 1.542e-8■■■□□ 17.5
FXN-203ENST00000396366 PPP2R1AP30153 589 aa24.64■■□□□ 1.54
FXN-203ENST00000396366 CHD4Q14839 1912 aa24.63■■□□□ 1.53
FXN-203ENST00000396366 TJP1Q07157 1748 aa24.63■■□□□ 1.53
FXN-203ENST00000396366 CRKLP46109 303 aaKnown RBP24.62■■□□□ 1.53
FXN-203ENST00000396366 PHACTR3Q96KR7 559 aa24.61■■□□□ 1.53
FXN-203ENST00000396366 ADAMTS7Q9UKP4 1686 aa24.61■■□□□ 1.53
FXN-203ENST00000396366 MRC1P22897 1456 aa24.6■■□□□ 1.53
FXN-203ENST00000396366 MMP10P09238 476 aa24.6■■□□□ 1.53
FXN-203ENST00000396366 DNAJC10Q8IXB1 793 aa24.6■■□□□ 1.53
FXN-203ENST00000396366 CFAP53Q96M91 514 aa24.6■■□□□ 1.53
FXN-203ENST00000396366 RFC4P35249 363 aa24.59■■□□□ 1.53
FXN-203ENST00000396366 INTS5Q6P9B9 1019 aaKnown RBP24.59■■□□□ 1.53
FXN-203ENST00000396366 IL17REQ8NFR9 667 aa24.59■■□□□ 1.53
FXN-203ENST00000396366 ADRA2BP18089 450 aa24.58■■□□□ 1.53
FXN-203ENST00000396366 ZNF784Q8NCA9 323 aaPredicted RBP24.58■■□□□ 1.53
FXN-203ENST00000396366 WWC3Q9ULE0 1092 aa24.58■■□□□ 1.53
FXN-203ENST00000396366 GYS1P13807 737 aa24.57■■□□□ 1.52
FXN-203ENST00000396366 PRKAR2BP31323 418 aa24.57■■□□□ 1.52
FXN-203ENST00000396366 RSPH6AQ9H0K4 717 aa24.57■■□□□ 1.52
FXN-203ENST00000396366 C4AP0C0L4 1744 aa24.57■■□□□ 1.52
FXN-203ENST00000396366 GNAT3A8MTJ3 354 aa24.56■■□□□ 1.52
FXN-203ENST00000396366 NLGN1Q8N2Q7 840 aa24.56■■□□□ 1.52
FXN-203ENST00000396366 SRP68Q9UHB9 627 aaKnown RBP24.56■■□□□ 1.52
FXN-203ENST00000396366 KCPQ6ZWJ8 1503 aa24.56■■□□□ 1.52
FXN-203ENST00000396366 CICQ96RK0 1608 aaPredicted RBP24.55■■□□□ 1.52
FXN-203ENST00000396366 GAS2L2Q8NHY3 880 aa24.55■■□□□ 1.52
FXN-203ENST00000396366 U2AF1L5P0DN76 240 aaPredicted RBP24.54■■□□□ 1.52
FXN-203ENST00000396366 U2AF1Q01081 240 aaKnown RBP eCLIP24.54■■□□□ 1.52
FXN-203ENST00000396366 CYP19A1P11511 503 aaPredicted RBP24.53■■□□□ 1.52
FXN-203ENST00000396366 CCDC87Q9NVE4 849 aa24.53■■□□□ 1.52
FXN-203ENST00000396366 NUDCQ9Y266 331 aa24.53■■□□□ 1.52
FXN-203ENST00000396366 GRIN3BO60391 1043 aa24.52■■□□□ 1.52
FXN-203ENST00000396366 TEFQ10587 303 aa24.5■■□□□ 1.51
FXN-203ENST00000396366 FKBP8Q14318 412 aa24.5■■□□□ 1.51
FXN-203ENST00000396366 USP42Q9H9J4 1324 aaKnown RBP24.5■■□□□ 1.51
FXN-203ENST00000396366 UBR2Q8IWV8 1755 aa24.49■■□□□ 1.51
FXN-203ENST00000396366 SIPA1L3O60292 1781 aaPredicted RBP24.49■■□□□ 1.51
FXN-203ENST00000396366 SOS1Q07889 1333 aaPredicted RBP24.48■■□□□ 1.51
FXN-203ENST00000396366 TTC5Q8N0Z6 440 aa24.48■■□□□ 1.51
FXN-203ENST00000396366 ZNF496Q96IT1 587 aaPredicted RBP24.48■■□□□ 1.51
FXN-203ENST00000396366 ZBTB1Q9Y2K1 713 aa24.48■■□□□ 1.51
FXN-203ENST00000396366 FCHSD2O94868 740 aa24.47■■□□□ 1.51
FXN-203ENST00000396366 ZNF790Q6PG37 636 aa24.47■■□□□ 1.51
FXN-203ENST00000396366 VSIG10Q8N0Z9 540 aa24.47■■□□□ 1.51
FXN-203ENST00000396366 PARP3Q9Y6F1 533 aa24.47■■□□□ 1.51
FXN-203ENST00000396366 KIF13BQ9NQT8 1826 aa24.47■■□□□ 1.51
FXN-203ENST00000396366 N4BP2Q86UW6 1770 aaPredicted RBP24.47■■□□□ 1.51
FXN-203ENST00000396366 CEMIPQ8WUJ3 1361 aa24.46■■□□□ 1.51
FXN-203ENST00000396366 A0A0G2JLW4 131 aa24.46■■□□□ 1.51
FXN-203ENST00000396366 KCNQ3O43525 872 aa24.46■■□□□ 1.51
FXN-203ENST00000396366 USPL1Q5W0Q7 1092 aa24.46■■□□□ 1.51
FXN-203ENST00000396366 KIAA1551Q9HCM1 1747 aa24.46■■□□□ 1.51
FXN-203ENST00000396366 CANXP27824 592 aaKnown RBP24.45■■□□□ 1.5
FXN-203ENST00000396366 DDR1Q08345 913 aa24.45■■□□□ 1.5
FXN-203ENST00000396366 PXDNLA1KZ92 1463 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms