RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 SRCIN1Q9C0H9 1055 aa10.56□□□□□ -0.72
BDNF-204ENST00000395980 NALCNQ8IZF0 1738 aa10.56□□□□□ -0.72
BDNF-204ENST00000395980 KIAA2012Q0VF49 1180 aa10.55□□□□□ -0.72
BDNF-204ENST00000395980 NUDT16Q96DE0 195 aaKnown RBP10.55□□□□□ -0.72
BDNF-204ENST00000395980 AGLP35573 1532 aa10.55□□□□□ -0.72
BDNF-204ENST00000395980 GNAI2P04899 355 aa10.55□□□□□ -0.72
BDNF-204ENST00000395980 EIF4A2Q14240 407 aaKnown RBP10.55□□□□□ -0.72
BDNF-204ENST00000395980 ZRANB1Q9UGI0 708 aa10.55□□□□□ -0.72
BDNF-204ENST00000395980 STAP2Q9UGK3 403 aa10.55□□□□□ -0.72
BDNF-204ENST00000395980 WDR33Q9C0J8 1336 aaKnown RBP10.55□□□□□ -0.72
BDNF-204ENST00000395980 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.55□□□□□ -0.72
BDNF-204ENST00000395980 TTC21BQ7Z4L5 1316 aa10.54□□□□□ -0.72
BDNF-204ENST00000395980 OVOS2A0A0J9YW53 1432 aa10.54□□□□□ -0.72
BDNF-204ENST00000395980 OVOS2Q6IE36 1432 aa10.54□□□□□ -0.72
BDNF-204ENST00000395980 KRT24Q2M2I5 525 aa10.54□□□□□ -0.72
BDNF-204ENST00000395980 FBXO31Q5XUX0 539 aaPredicted RBP10.54□□□□□ -0.72
BDNF-204ENST00000395980 SULT6B1Q6IMI4 303 aa10.54□□□□□ -0.72
BDNF-204ENST00000395980 LRRCC1Q9C099 1032 aa10.54□□□□□ -0.72
BDNF-204ENST00000395980 APBB1O00213 710 aa10.54□□□□□ -0.72
BDNF-204ENST00000395980 PLEKHG5O94827 1062 aa10.54□□□□□ -0.72
BDNF-204ENST00000395980 SLC4A2P04920 1241 aa10.54□□□□□ -0.72
BDNF-204ENST00000395980 MX1P20591 662 aa10.54□□□□□ -0.72
BDNF-204ENST00000395980 CHMLP26374 656 aa10.54□□□□□ -0.72
BDNF-204ENST00000395980 SENP3Q9H4L4 574 aaPredicted RBP10.54□□□□□ -0.72
BDNF-204ENST00000395980 FAM13BQ9NYF5 915 aa10.54□□□□□ -0.72
BDNF-204ENST00000395980 LETM1O95202 739 aaPredicted RBP10.54□□□□□ -0.72
BDNF-204ENST00000395980 GNAI3P08754 354 aa10.54□□□□□ -0.72
BDNF-204ENST00000395980 AEBP1Q8IUX7 1158 aa10.54□□□□□ -0.72
BDNF-204ENST00000395980 RBM10P98175 930 aaKnown RBP10.53□□□□□ -0.72
BDNF-204ENST00000395980 PTMAP06454 111 aaKnown RBP10.53□□□□□ -0.72
BDNF-204ENST00000395980 SOS1Q07889 1333 aaPredicted RBP10.53□□□□□ -0.72
BDNF-204ENST00000395980 PXDNLA1KZ92 1463 aa10.53□□□□□ -0.72
BDNF-204ENST00000395980 CACNA1FO60840 1977 aa10.53□□□□□ -0.72
BDNF-204ENST00000395980 PRIMPOLQ96LW4 560 aa10.53□□□□□ -0.72
BDNF-204ENST00000395980 MCM10Q7L590 875 aa10.52□□□□□ -0.72
BDNF-204ENST00000395980 TOPAZ1Q8N9V7 1692 aa10.52□□□□□ -0.72
BDNF-204ENST00000395980 XRN1Q8IZH2 1706 aaKnown RBP10.52□□□□□ -0.73
BDNF-204ENST00000395980 FAM208AQ9UK61 1670 aaKnown RBP10.52□□□□□ -0.73
BDNF-204ENST00000395980 RNF214Q8ND24 703 aa10.52□□□□□ -0.73
BDNF-204ENST00000395980 MYRIPQ8NFW9 859 aa10.52□□□□□ -0.73
BDNF-204ENST00000395980 PALD1Q9ULE6 856 aa10.52□□□□□ -0.73
BDNF-204ENST00000395980 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.52□□□□□ -0.73
BDNF-204ENST00000395980 USP31Q70CQ4 1352 aa10.52□□□□□ -0.73
BDNF-204ENST00000395980 PEAK1Q9H792 1746 aa10.52□□□□□ -0.73
BDNF-204ENST00000395980 HMGN5P82970 282 aaKnown RBP10.52□□□□□ -0.73
BDNF-204ENST00000395980 ATP8B2P98198 1209 aa10.52□□□□□ -0.73
BDNF-204ENST00000395980 CCDC183Q5T5S1 534 aa10.52□□□□□ -0.73
BDNF-204ENST00000395980 CHAMP1Q96JM3 812 aa10.52□□□□□ -0.73
BDNF-204ENST00000395980 ANO2Q9NQ90 1003 aa10.52□□□□□ -0.73
BDNF-204ENST00000395980 LRRC37A3O60309 1634 aa10.52□□□□□ -0.73
BDNF-204ENST00000395980 RPAP1Q9BWH6 1393 aaPredicted RBP10.52□□□□□ -0.73
BDNF-204ENST00000395980 SMAP1Q8IYB5 467 aaPredicted RBP10.51□□□□□ -0.73
BDNF-204ENST00000395980 PIBF1Q8WXW3 757 aa10.51□□□□□ -0.73
BDNF-204ENST00000395980 HSPA4P34932 840 aa10.5□□□□□ -0.73
BDNF-204ENST00000395980 GTF2F1P35269 517 aaKnown RBP eCLIP10.5□□□□□ -0.73
BDNF-204ENST00000395980 FOXD4L5Q5VV16 416 aaPredicted RBP10.5□□□□□ -0.73
BDNF-204ENST00000395980 FOXD4L4Q8WXT5 416 aaPredicted RBP10.5□□□□□ -0.73
BDNF-204ENST00000395980 EXOC6BQ9Y2D4 811 aa10.5□□□□□ -0.73
BDNF-204ENST00000395980 METP08581 1390 aa10.5□□□□□ -0.73
BDNF-204ENST00000395980 USP48Q86UV5 1035 aa10.5□□□□□ -0.73
BDNF-204ENST00000395980 STK31Q9BXU1 1019 aa10.5□□□□□ -0.73
BDNF-204ENST00000395980 FMN2Q9NZ56 1722 aa10.5□□□□□ -0.73
BDNF-204ENST00000395980 KDRP35968 1356 aa10.5□□□□□ -0.73
BDNF-204ENST00000395980 G2E3Q7L622 706 aa10.5□□□□□ -0.73
BDNF-204ENST00000395980 SLC4A10Q6U841 1118 aa10.49□□□□□ -0.73
BDNF-204ENST00000395980 TSPYL4Q9UJ04 414 aa10.49□□□□□ -0.73
BDNF-204ENST00000395980 HTATSF1O43719 755 aaKnown RBP10.49□□□□□ -0.73
BDNF-204ENST00000395980 PRR36Q9H6K5 1346 aa10.49□□□□□ -0.73
BDNF-204ENST00000395980 SPTLC3Q9NUV7 552 aa10.49□□□□□ -0.73
BDNF-204ENST00000395980 TRIM6-TRIM34B2RNG4 842 aa10.49□□□□□ -0.73
BDNF-204ENST00000395980 F6X3S4 739 aa10.49□□□□□ -0.73
BDNF-204ENST00000395980 UBE2HP62256 183 aa10.49□□□□□ -0.73
BDNF-204ENST00000395980 RTF1Q92541 710 aaKnown RBP10.49□□□□□ -0.73
BDNF-204ENST00000395980 ATP6V1DQ9Y5K8 247 aa10.49□□□□□ -0.73
BDNF-204ENST00000395980 RAD50Q92878 1312 aa10.48□□□□□ -0.73
BDNF-204ENST00000395980 GADD45BO75293 160 aaPredicted RBP10.48□□□□□ -0.73
BDNF-204ENST00000395980 PLEKHG3A1L390 1219 aa10.48□□□□□ -0.73
BDNF-204ENST00000395980 RAB11FIP3O75154 756 aa10.48□□□□□ -0.73
BDNF-204ENST00000395980 RILPL2Q969X0 211 aa10.48□□□□□ -0.73
BDNF-204ENST00000395980 CCDC94Q9BW85 323 aaPredicted RBP10.48□□□□□ -0.73
BDNF-204ENST00000395980 USP6P35125 1406 aa10.48□□□□□ -0.73
BDNF-204ENST00000395980 TPM3P06753 285 aa10.48□□□□□ -0.73
BDNF-204ENST00000395980 ZSCAN22P10073 491 aaPredicted RBP10.48□□□□□ -0.73
BDNF-204ENST00000395980 FLIIQ13045 1269 aa10.48□□□□□ -0.73
BDNF-204ENST00000395980 CCDC30Q5VVM6 783 aa10.48□□□□□ -0.73
BDNF-204ENST00000395980 CRYBG1Q9Y4K1 1723 aa10.48□□□□□ -0.73
BDNF-204ENST00000395980 NOLC1Q14978 699 aaKnown RBP eCLIP10.47□□□□□ -0.73
BDNF-204ENST00000395980 TXNDC2Q86VQ3 553 aa10.47□□□□□ -0.73
BDNF-204ENST00000395980 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.47□□□□□ -0.73
BDNF-204ENST00000395980 PNMA6EA0A0J9YXQ4 647 aa10.47□□□□□ -0.73
BDNF-204ENST00000395980 TTC14Q96N46 770 aa10.47□□□□□ -0.73
BDNF-204ENST00000395980 UPF3BQ9BZI7 483 aaKnown RBP10.47□□□□□ -0.73
BDNF-204ENST00000395980 BABAM1Q9NWV8 329 aa10.47□□□□□ -0.73
BDNF-204ENST00000395980 PRDM4Q9UKN5 801 aa10.47□□□□□ -0.73
BDNF-204ENST00000395980 TCHHQ07283 1943 aa10.47□□□□□ -0.73
BDNF-204ENST00000395980 TSHZ3Q63HK5 1081 aa10.47□□□□□ -0.73
BDNF-204ENST00000395980 HDGFP51858 240 aaKnown RBP10.46□□□□□ -0.73
BDNF-204ENST00000395980 FKBP5Q13451 457 aaPredicted RBP10.46□□□□□ -0.73
BDNF-204ENST00000395980 SSH3Q8TE77 659 aa10.46□□□□□ -0.73
BDNF-204ENST00000395980 MAP3K19Q56UN5 1328 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms