RNA–Protein interactions for RNA: ENST00000395963.2

CCR9-203, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-203ENST00000395963 TOGARAM1Q9Y4F4 1720 aa11.43□□□□□ -0.58
CCR9-203ENST00000395963 UBR2Q8IWV8 1755 aa11.43□□□□□ -0.58
CCR9-203ENST00000395963 QTRT2Q9H974 415 aaKnown RBP11.42□□□□□ -0.58
CCR9-203ENST00000395963 NHSQ6T4R5 1651 aa11.42□□□□□ -0.58
CCR9-203ENST00000395963 DOT1LQ8TEK3 1739 aa11.41□□□□□ -0.58
CCR9-203ENST00000395963 MCM10Q7L590 875 aa11.41□□□□□ -0.58
CCR9-203ENST00000395963 BRPF1P55201 1214 aaPredicted RBP11.41□□□□□ -0.58
CCR9-203ENST00000395963 ALDH1L2Q3SY69 923 aa11.41□□□□□ -0.58
CCR9-203ENST00000395963 USP35Q9P2H5 1018 aa11.41□□□□□ -0.58
CCR9-203ENST00000395963 SALL2Q9Y467 1007 aaPredicted RBP11.41□□□□□ -0.58
CCR9-203ENST00000395963 MBIPQ9NS73 344 aa11.4□□□□□ -0.58
CCR9-203ENST00000395963 TSPYL4Q9UJ04 414 aa11.4□□□□□ -0.58
CCR9-203ENST00000395963 HEG1Q9ULI3 1381 aa11.4□□□□□ -0.58
CCR9-203ENST00000395963 CABP4P57796 275 aa11.4□□□□□ -0.59
CCR9-203ENST00000395963 FAM98CQ17RN3 349 aaKnown RBP11.4□□□□□ -0.59
CCR9-203ENST00000395963 MPRIPQ6WCQ1 1025 aa11.4□□□□□ -0.59
CCR9-203ENST00000395963 CDCA7LQ96GN5 454 aa11.4□□□□□ -0.59
CCR9-203ENST00000395963 LAMB4A4D0S4 1761 aa11.4□□□□□ -0.59
CCR9-203ENST00000395963 ITGB4P16144 1822 aa11.39□□□□□ -0.59
CCR9-203ENST00000395963 BTBD11A6QL63 1104 aa11.39□□□□□ -0.59
CCR9-203ENST00000395963 RNF123Q5XPI4 1314 aa11.38□□□□□ -0.59
CCR9-203ENST00000395963 DCTN1Q14203 1278 aa11.38□□□□□ -0.59
CCR9-203ENST00000395963 VSIG10Q8N0Z9 540 aa11.38□□□□□ -0.59
CCR9-203ENST00000395963 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.38□□□□□ -0.59
CCR9-203ENST00000395963 LGR6Q9HBX8 967 aa11.38□□□□□ -0.59
CCR9-203ENST00000395963 SPINK5Q9NQ38 1064 aaPredicted RBP11.38□□□□□ -0.59
CCR9-203ENST00000395963 CACNA1FO60840 1977 aa11.38□□□□□ -0.59
CCR9-203ENST00000395963 TMOD3Q9NYL9 352 aa11.38□□□□□ -0.59
CCR9-203ENST00000395963 ERBB4Q15303 1308 aa11.37□□□□□ -0.59
CCR9-203ENST00000395963 RXRBP28702 533 aa11.37□□□□□ -0.59
CCR9-203ENST00000395963 DDX54Q8TDD1 881 aaKnown RBP11.37□□□□□ -0.59
CCR9-203ENST00000395963 SMARCC1Q92922 1105 aaPredicted RBP11.37□□□□□ -0.59
CCR9-203ENST00000395963 RCAN3Q9UKA8 241 aa11.37□□□□□ -0.59
CCR9-203ENST00000395963 SEPT12Q8IYM1 358 aa11.37□□□□□ -0.59
CCR9-203ENST00000395963 TTC5Q8N0Z6 440 aa11.37□□□□□ -0.59
CCR9-203ENST00000395963 MARCH10Q8NA82 808 aaPredicted RBP11.37□□□□□ -0.59
CCR9-203ENST00000395963 THUMPD2Q9BTF0 503 aaKnown RBP11.37□□□□□ -0.59
CCR9-203ENST00000395963 MS4A1P11836 297 aa11.36□□□□□ -0.59
CCR9-203ENST00000395963 EIF4A1P60842 406 aaKnown RBP11.36□□□□□ -0.59
CCR9-203ENST00000395963 ZNF790Q6PG37 636 aa11.36□□□□□ -0.59
CCR9-203ENST00000395963 TEX13AQ9BXU3 409 aaPredicted RBP11.36□□□□□ -0.59
CCR9-203ENST00000395963 KCPQ6ZWJ8 1503 aa11.36□□□□□ -0.59
CCR9-203ENST00000395963 RGPD3A6NKT7 1758 aaPredicted RBP11.36□□□□□ -0.59
CCR9-203ENST00000395963 RGPD4Q7Z3J3 1758 aa11.36□□□□□ -0.59
CCR9-203ENST00000395963 EXOSC9Q06265 439 aaKnown RBP11.36□□□□□ -0.59
CCR9-203ENST00000395963 TWISTNBQ3B726 338 aaPredicted RBP11.36□□□□□ -0.59
CCR9-203ENST00000395963 FMNL2Q96PY5 1086 aa11.36□□□□□ -0.59
CCR9-203ENST00000395963 KIF16BQ96L93 1317 aa11.36□□□□□ -0.59
CCR9-203ENST00000395963 FAM196AQ6ZSG2 479 aa11.35□□□□□ -0.59
CCR9-203ENST00000395963 SBF2Q86WG5 1849 aa11.35□□□□□ -0.59
CCR9-203ENST00000395963 TSR2Q969E8 191 aaKnown RBP11.35□□□□□ -0.59
CCR9-203ENST00000395963 LAS1LQ9Y4W2 734 aaKnown RBP11.35□□□□□ -0.59
CCR9-203ENST00000395963 VAMP4O75379 141 aa11.34□□□□□ -0.59
CCR9-203ENST00000395963 ERICH6BQ5W0A0 696 aa11.34□□□□□ -0.59
CCR9-203ENST00000395963 NFATC2IPQ8NCF5 419 aa11.34□□□□□ -0.59
CCR9-203ENST00000395963 CCDC30Q5VVM6 783 aa11.34□□□□□ -0.59
CCR9-203ENST00000395963 KRT27Q7Z3Y8 459 aa11.34□□□□□ -0.59
CCR9-203ENST00000395963 ARHGAP45Q92619 1136 aa11.34□□□□□ -0.59
CCR9-203ENST00000395963 BRWD3Q6RI45 1802 aa11.33□□□□□ -0.59
CCR9-203ENST00000395963 RGS12O14924 1447 aa11.33□□□□□ -0.6
CCR9-203ENST00000395963 RARSP54136 660 aaKnown RBP11.33□□□□□ -0.6
CCR9-203ENST00000395963 IBTKQ9P2D0 1353 aaPredicted RBP11.33□□□□□ -0.6
CCR9-203ENST00000395963 SNRPA1P09661 255 aaKnown RBP11.33□□□□□ -0.6
CCR9-203ENST00000395963 A0A0G2JS52 829 aa11.32□□□□□ -0.6
CCR9-203ENST00000395963 IPO8O15397 1037 aaKnown RBP11.32□□□□□ -0.6
CCR9-203ENST00000395963 RBM19Q9Y4C8 960 aaKnown RBP11.32□□□□□ -0.6
CCR9-203ENST00000395963 RREB1Q92766 1687 aa11.32□□□□□ -0.6
CCR9-203ENST00000395963 PTPRCP08575 1304 aa11.32□□□□□ -0.6
CCR9-203ENST00000395963 GIGYF1O75420 1035 aaPredicted RBP11.32□□□□□ -0.6
CCR9-203ENST00000395963 AAMPQ13685 434 aa11.32□□□□□ -0.6
CCR9-203ENST00000395963 C5P01031 1676 aa11.32□□□□□ -0.6
CCR9-203ENST00000395963 LY75O60449 1722 aa11.31□□□□□ -0.6
CCR9-203ENST00000395963 PIGBQ92521 554 aa11.31□□□□□ -0.6
CCR9-203ENST00000395963 STK31Q9BXU1 1019 aa11.31□□□□□ -0.6
CCR9-203ENST00000395963 BCL11BQ9C0K0 894 aaPredicted RBP11.31□□□□□ -0.6
CCR9-203ENST00000395963 RGS17Q9UGC6 210 aaPredicted RBP11.31□□□□□ -0.6
CCR9-203ENST00000395963 PXDNLA1KZ92 1463 aa11.31□□□□□ -0.6
CCR9-203ENST00000395963 BTAF1O14981 1849 aa11.31□□□□□ -0.6
CCR9-203ENST00000395963 C8orf58Q8NAV2 365 aa11.31□□□□□ -0.6
CCR9-203ENST00000395963 MSH5O43196 834 aa11.3□□□□□ -0.6
CCR9-203ENST00000395963 PDE3AQ14432 1141 aa11.3□□□□□ -0.6
CCR9-203ENST00000395963 N4BP2Q86UW6 1770 aaPredicted RBP11.3□□□□□ -0.6
CCR9-203ENST00000395963 TJP1Q07157 1748 aa11.3□□□□□ -0.6
CCR9-203ENST00000395963 RRP1P56182 461 aaKnown RBP11.3□□□□□ -0.6
CCR9-203ENST00000395963 ILDR1Q86SU0 546 aaPredicted RBP11.3□□□□□ -0.6
CCR9-203ENST00000395963 RGL2O15211 777 aa11.29□□□□□ -0.6
CCR9-203ENST00000395963 PRIM1P49642 420 aaKnown RBP11.29□□□□□ -0.6
CCR9-203ENST00000395963 ANO8Q9HCE9 1232 aaPredicted RBP11.29□□□□□ -0.6
CCR9-203ENST00000395963 ATG3Q9NT62 314 aa11.29□□□□□ -0.6
CCR9-203ENST00000395963 DBF4Q9UBU7 674 aaPredicted RBP11.29□□□□□ -0.6
CCR9-203ENST00000395963 NEFLP07196 543 aa11.29□□□□□ -0.6
CCR9-203ENST00000395963 HDGFL1Q5TGJ6 251 aa11.29□□□□□ -0.6
CCR9-203ENST00000395963 API5Q9BZZ5 524 aaKnown RBP11.29□□□□□ -0.6
CCR9-203ENST00000395963 CHMP4BQ9H444 224 aaKnown RBP11.29□□□□□ -0.6
CCR9-203ENST00000395963 SMC4Q9NTJ3 1288 aa11.29□□□□□ -0.6
CCR9-203ENST00000395963 COL5A3P25940 1745 aaPredicted RBP11.28□□□□□ -0.6
CCR9-203ENST00000395963 SENP3-EIF4A1A0A087X0R7 540 aa11.28□□□□□ -0.6
CCR9-203ENST00000395963 MRPL50Q8N5N7 158 aaKnown RBP11.28□□□□□ -0.6
CCR9-203ENST00000395963 ZNF496Q96IT1 587 aaPredicted RBP11.28□□□□□ -0.6
CCR9-203ENST00000395963 HYPKQ9NX55 129 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms