RNA–Protein interactions for RNA: ENST00000395946.2

XCR1-202, Transcript of X-C motif chemokine receptor 1, humanhuman

TSL 1 (best)

Gene XCR1, Length 332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-202ENST00000395946 ERVV-2B6SEH9 535 aa9.64□□□□□ -0.87
XCR1-202ENST00000395946 MSL1Q68DK7 614 aa9.64□□□□□ -0.87
XCR1-202ENST00000395946 EYA1Q99502 592 aa9.64□□□□□ -0.87
XCR1-202ENST00000395946 GPBP1L1Q9HC44 474 aaPredicted RBP9.64□□□□□ -0.87
XCR1-202ENST00000395946 SLC4A2P04920 1241 aa9.63□□□□□ -0.87
XCR1-202ENST00000395946 TGFB2P61812 414 aa9.63□□□□□ -0.87
XCR1-202ENST00000395946 AMOTQ4VCS5 1084 aa9.63□□□□□ -0.87
XCR1-202ENST00000395946 RC3H1Q5TC82 1133 aaKnown RBP9.63□□□□□ -0.87
XCR1-202ENST00000395946 NLGN1Q8N2Q7 840 aa9.63□□□□□ -0.87
XCR1-202ENST00000395946 DCAF5Q96JK2 942 aa9.63□□□□□ -0.87
XCR1-202ENST00000395946 POLKQ9UBT6 870 aa9.63□□□□□ -0.87
XCR1-202ENST00000395946 GOLGB1Q14789 3259 aaKnown RBP9.63□□□□□ -0.87
XCR1-202ENST00000395946 CNTNAP4Q9C0A0 1308 aa9.62□□□□□ -0.87
XCR1-202ENST00000395946 GNPATO15228 680 aa9.62□□□□□ -0.87
XCR1-202ENST00000395946 PPM1GO15355 546 aaPredicted RBP9.62□□□□□ -0.87
XCR1-202ENST00000395946 ATP6V1AP38606 617 aa9.62□□□□□ -0.87
XCR1-202ENST00000395946 LINC00116Q8NCU8 138 aa9.62□□□□□ -0.87
XCR1-202ENST00000395946 RTCBQ9Y3I0 505 aaKnown RBP9.62□□□□□ -0.87
XCR1-202ENST00000395946 C10orf71Q711Q0 1435 aa9.62□□□□□ -0.87
XCR1-202ENST00000395946 PHF14O94880 888 aa9.61□□□□□ -0.87
XCR1-202ENST00000395946 C1QBPQ07021 282 aaKnown RBP9.61□□□□□ -0.87
XCR1-202ENST00000395946 EIF4A2Q14240 407 aaKnown RBP9.61□□□□□ -0.87
XCR1-202ENST00000395946 ATG3Q9NT62 314 aa9.61□□□□□ -0.87
XCR1-202ENST00000395946 PXDNLA1KZ92 1463 aa9.6□□□□□ -0.87
XCR1-202ENST00000395946 HSPA6P17066 643 aa9.6□□□□□ -0.87
XCR1-202ENST00000395946 ITPK1Q13572 414 aa9.6□□□□□ -0.87
XCR1-202ENST00000395946 PLEKHO1Q53GL0 409 aaPredicted RBP9.6□□□□□ -0.87
XCR1-202ENST00000395946 TRAPPC3LQ5T215 181 aa9.6□□□□□ -0.87
XCR1-202ENST00000395946 ASAP1Q9ULH1 1129 aa9.6□□□□□ -0.87
XCR1-202ENST00000395946 KIF13BQ9NQT8 1826 aa9.6□□□□□ -0.87
XCR1-202ENST00000395946 MMP10P09238 476 aa9.59□□□□□ -0.87
XCR1-202ENST00000395946 AMIGO3Q86WK7 504 aa9.59□□□□□ -0.87
XCR1-202ENST00000395946 CCDC87Q9NVE4 849 aa9.59□□□□□ -0.87
XCR1-202ENST00000395946 RPS6KA4O75676 772 aa9.58□□□□□ -0.88
XCR1-202ENST00000395946 EIF4G2P78344 907 aaKnown RBP eCLIP9.58□□□□□ -0.88
XCR1-202ENST00000395946 IFFO2Q5TF58 517 aa9.58□□□□□ -0.88
XCR1-202ENST00000395946 COL5A3P25940 1745 aaPredicted RBP9.58□□□□□ -0.88
XCR1-202ENST00000395946 KDM6AO15550 1401 aaPredicted RBP9.57□□□□□ -0.88
XCR1-202ENST00000395946 RFC4P35249 363 aa9.57□□□□□ -0.88
XCR1-202ENST00000395946 C1orf141Q5JVX7 400 aa9.57□□□□□ -0.88
XCR1-202ENST00000395946 C4AP0C0L4 1744 aa9.56□□□□□ -0.88
XCR1-202ENST00000395946 GYS1P13807 737 aa9.56□□□□□ -0.88
XCR1-202ENST00000395946 CABP4P57796 275 aa9.56□□□□□ -0.88
XCR1-202ENST00000395946 ZNF530Q6P9A1 599 aaPredicted RBP9.56□□□□□ -0.88
XCR1-202ENST00000395946 PARP3Q9Y6F1 533 aa9.56□□□□□ -0.88
XCR1-202ENST00000395946 KIAA1551Q9HCM1 1747 aa9.56□□□□□ -0.88
XCR1-202ENST00000395946 ZC3H4Q9UPT8 1303 aaKnown RBP9.56□□□□□ -0.88
XCR1-202ENST00000395946 MRC1P22897 1456 aa9.55□□□□□ -0.88
XCR1-202ENST00000395946 KIF3CO14782 793 aa9.55□□□□□ -0.88
XCR1-202ENST00000395946 TOMM70O94826 608 aa9.55□□□□□ -0.88
XCR1-202ENST00000395946 MTHFSP49914 203 aa9.55□□□□□ -0.88
XCR1-202ENST00000395946 APLP1P51693 650 aa9.55□□□□□ -0.88
XCR1-202ENST00000395946 CACNB1Q02641 598 aaPredicted RBP9.55□□□□□ -0.88
XCR1-202ENST00000395946 ARHGEF1Q92888 912 aaKnown RBP9.55□□□□□ -0.88
XCR1-202ENST00000395946 RBM42Q9BTD8 480 aaKnown RBP9.55□□□□□ -0.88
XCR1-202ENST00000395946 USP42Q9H9J4 1324 aaKnown RBP9.55□□□□□ -0.88
XCR1-202ENST00000395946 SLC4A9Q96Q91 983 aa9.54□□□□□ -0.88
XCR1-202ENST00000395946 BCS1LQ9Y276 419 aa9.54□□□□□ -0.88
XCR1-202ENST00000395946 AKAP4Q5JQC9 854 aa9.53□□□□□ -0.88
XCR1-202ENST00000395946 MORC1Q86VD1 984 aa9.53□□□□□ -0.88
XCR1-202ENST00000395946 PANK3Q9H999 370 aa9.53□□□□□ -0.88
XCR1-202ENST00000395946 PIM2Q9P1W9 311 aa9.53□□□□□ -0.88
XCR1-202ENST00000395946 KNSTRNQ9Y448 316 aa9.53□□□□□ -0.88
XCR1-202ENST00000395946 U3KPZ7 1027 aaPredicted RBP9.53□□□□□ -0.88
XCR1-202ENST00000395946 KDM2BQ8NHM5 1336 aa9.53□□□□□ -0.88
XCR1-202ENST00000395946 FCHSD2O94868 740 aa9.52□□□□□ -0.89
XCR1-202ENST00000395946 TNNT2P45379 298 aaPredicted RBP9.52□□□□□ -0.89
XCR1-202ENST00000395946 CRKLP46109 303 aaKnown RBP9.52□□□□□ -0.89
XCR1-202ENST00000395946 VSIG10Q8N0Z9 540 aa9.52□□□□□ -0.89
XCR1-202ENST00000395946 RBM46Q8TBY0 533 aaKnown RBP9.52□□□□□ -0.89
XCR1-202ENST00000395946 ZNF526Q8TF50 670 aaPredicted RBP9.52□□□□□ -0.89
XCR1-202ENST00000395946 BRCA1P38398 1863 aaKnown RBP9.51□□□□□ -0.89
XCR1-202ENST00000395946 HSPA5P11021 654 aaKnown RBP9.51□□□□□ -0.89
XCR1-202ENST00000395946 DPEP1P16444 411 aa9.51□□□□□ -0.89
XCR1-202ENST00000395946 IL13P35225 146 aa9.51□□□□□ -0.89
XCR1-202ENST00000395946 FSTL1Q12841 308 aa9.51□□□□□ -0.89
XCR1-202ENST00000395946 DALRD3Q5D0E6 543 aaKnown RBP9.51□□□□□ -0.89
XCR1-202ENST00000395946 SULT6B1Q6IMI4 303 aa9.51□□□□□ -0.89
XCR1-202ENST00000395946 SMIM5Q71RC9 77 aa9.51□□□□□ -0.89
XCR1-202ENST00000395946 POLR3GLQ9BT43 218 aa9.51□□□□□ -0.89
XCR1-202ENST00000395946 SLC52A2Q9HAB3 445 aa9.51□□□□□ -0.89
XCR1-202ENST00000395946 ARFGEF1Q9Y6D6 1849 aa9.51□□□□□ -0.89
XCR1-202ENST00000395946 TJP1Q07157 1748 aa9.51□□□□□ -0.89
XCR1-202ENST00000395946 A0A0G2JLW4 131 aa9.5□□□□□ -0.89
XCR1-202ENST00000395946 PTCD1O75127 700 aaKnown RBP9.5□□□□□ -0.89
XCR1-202ENST00000395946 KCNA3P22001 575 aa9.5□□□□□ -0.89
XCR1-202ENST00000395946 ARHGAP27Q6ZUM4 889 aa9.5□□□□□ -0.89
XCR1-202ENST00000395946 NFATC2IPQ8NCF5 419 aa9.5□□□□□ -0.89
XCR1-202ENST00000395946 PDZRN3Q9UPQ7 1066 aa9.5□□□□□ -0.89
XCR1-202ENST00000395946 ADAMTS7Q9UKP4 1686 aa9.5□□□□□ -0.89
XCR1-202ENST00000395946 SOS1Q07889 1333 aaPredicted RBP9.5□□□□□ -0.89
XCR1-202ENST00000395946 NPC1L1Q9UHC9 1359 aa9.5□□□□□ -0.89
XCR1-202ENST00000395946 CEP350Q5VT06 3117 aa9.49□□□□□ -0.89
XCR1-202ENST00000395946 POLRMTO00411 1230 aaKnown RBP9.49□□□□□ -0.89
XCR1-202ENST00000395946 ZPR1O75312 459 aa9.49□□□□□ -0.89
XCR1-202ENST00000395946 AEBP1Q8IUX7 1158 aa9.49□□□□□ -0.89
XCR1-202ENST00000395946 C16orf71Q8IYS4 520 aaPredicted RBP9.49□□□□□ -0.89
XCR1-202ENST00000395946 SCN11AQ9UI33 1791 aa9.49□□□□□ -0.89
XCR1-202ENST00000395946 N4BP2Q86UW6 1770 aaPredicted RBP9.48□□□□□ -0.89
XCR1-202ENST00000395946 TM4SF1P30408 202 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms