RNA–Protein interactions for RNA: ENST00000395577.2

CDKN3-203, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-203ENST00000395577 GTF3C2Q8WUA4 911 aaPredicted RBP9.48□□□□□ -0.89
CDKN3-203ENST00000395577 EMILIN1Q9Y6C2 1016 aa9.48□□□□□ -0.89
CDKN3-203ENST00000395577 H3BRB1 525 aa9.47□□□□□ -0.89
CDKN3-203ENST00000395577 FOXO3O43524 673 aa9.47□□□□□ -0.89
CDKN3-203ENST00000395577 ICMTO60725 284 aa9.47□□□□□ -0.89
CDKN3-203ENST00000395577 MARSP56192 900 aaKnown RBP9.47□□□□□ -0.89
CDKN3-203ENST00000395577 IFFO2Q5TF58 517 aa9.47□□□□□ -0.89
CDKN3-203ENST00000395577 CAPN12Q6ZSI9 719 aa9.47□□□□□ -0.89
CDKN3-203ENST00000395577 TUT1Q9H6E5 874 aaKnown RBP9.47□□□□□ -0.89
CDKN3-203ENST00000395577 ATAD2Q6PL18 1390 aa9.47□□□□□ -0.89
CDKN3-203ENST00000395577 ALDH1A1P00352 501 aa9.46□□□□□ -0.9
CDKN3-203ENST00000395577 GLYCTKQ8IVS8 523 aa9.46□□□□□ -0.9
CDKN3-203ENST00000395577 SLC4A9Q96Q91 983 aa9.46□□□□□ -0.9
CDKN3-203ENST00000395577 TSPAN10Q9H1Z9 355 aaPredicted RBP9.46□□□□□ -0.9
CDKN3-203ENST00000395577 DNMT3AQ9Y6K1 912 aaPredicted RBP9.46□□□□□ -0.9
CDKN3-203ENST00000395577 EPHA4P54764 986 aa9.45□□□□□ -0.9
CDKN3-203ENST00000395577 NAA30Q147X3 362 aaPredicted RBP9.45□□□□□ -0.9
CDKN3-203ENST00000395577 ZNF697Q5TEC3 545 aa9.45□□□□□ -0.9
CDKN3-203ENST00000395577 DNAJC14Q6Y2X3 702 aaPredicted RBP9.45□□□□□ -0.9
CDKN3-203ENST00000395577 CHMP7Q8WUX9 453 aaPredicted RBP9.45□□□□□ -0.9
CDKN3-203ENST00000395577 COL26A1Q96A83 441 aa9.45□□□□□ -0.9
CDKN3-203ENST00000395577 VTI1AQ96AJ9 217 aa9.45□□□□□ -0.9
CDKN3-203ENST00000395577 ARHGEF10LQ9HCE6 1279 aa9.45□□□□□ -0.9
CDKN3-203ENST00000395577 RAB6BQ9NRW1 208 aa9.45□□□□□ -0.9
CDKN3-203ENST00000395577 WASF2Q9Y6W5 498 aa9.45□□□□□ -0.9
CDKN3-203ENST00000395577 C21orf2O43822 256 aa9.44□□□□□ -0.9
CDKN3-203ENST00000395577 ERCC3P19447 782 aa9.44□□□□□ -0.9
CDKN3-203ENST00000395577 FKBP4Q02790 459 aaKnown RBP eCLIP9.44□□□□□ -0.9
CDKN3-203ENST00000395577 NNTQ13423 1086 aa9.44□□□□□ -0.9
CDKN3-203ENST00000395577 A6NJY4 79 aa9.43□□□□□ -0.9
CDKN3-203ENST00000395577 PPP1R12BO60237 982 aaPredicted RBP9.43□□□□□ -0.9
CDKN3-203ENST00000395577 SMTNP53814 917 aa9.43□□□□□ -0.9
CDKN3-203ENST00000395577 FOXC1Q12948 553 aa9.43□□□□□ -0.9
CDKN3-203ENST00000395577 SF3B2Q13435 895 aaKnown RBP9.43□□□□□ -0.9
CDKN3-203ENST00000395577 MTMR3Q13615 1198 aa9.43□□□□□ -0.9
CDKN3-203ENST00000395577 ZNF598Q86UK7 904 aaKnown RBP9.43□□□□□ -0.9
CDKN3-203ENST00000395577 SLC9A9Q8IVB4 645 aa9.43□□□□□ -0.9
CDKN3-203ENST00000395577 ADH1AP07327 375 aa9.42□□□□□ -0.9
CDKN3-203ENST00000395577 MMRN1Q13201 1228 aa9.42□□□□□ -0.9
CDKN3-203ENST00000395577 TBCELQ5QJ74 424 aa9.42□□□□□ -0.9
CDKN3-203ENST00000395577 XAGE2Q96GT9 111 aa9.42□□□□□ -0.9
CDKN3-203ENST00000395577 SCHIP1Q9P0W5 487 aaPredicted RBP9.42□□□□□ -0.9
CDKN3-203ENST00000395577 A0A1W2PRU2 124 aa9.41□□□□□ -0.9
CDKN3-203ENST00000395577 IL2RAP01589 272 aa9.41□□□□□ -0.9
CDKN3-203ENST00000395577 FOXK2Q01167 660 aa9.41□□□□□ -0.9
CDKN3-203ENST00000395577 MTFR1Q15390 333 aa9.41□□□□□ -0.9
CDKN3-203ENST00000395577 HELQQ8TDG4 1101 aa9.41□□□□□ -0.9
CDKN3-203ENST00000395577 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.41□□□□□ -0.9
CDKN3-203ENST00000395577 E9PSI1 815 aa9.4□□□□□ -0.9
CDKN3-203ENST00000395577 CBLBQ13191 982 aa9.4□□□□□ -0.9
CDKN3-203ENST00000395577 NOM1Q5C9Z4 860 aaKnown RBP9.4□□□□□ -0.9
CDKN3-203ENST00000395577 SNIP1Q8TAD8 396 aaKnown RBP9.4□□□□□ -0.9
CDKN3-203ENST00000395577 CNKSR1Q969H4 720 aa9.4□□□□□ -0.9
CDKN3-203ENST00000395577 PKD2L1Q9P0L9 805 aa9.4□□□□□ -0.9
CDKN3-203ENST00000395577 TLR1Q15399 786 aa9.39□□□□□ -0.91
CDKN3-203ENST00000395577 ECM1Q16610 540 aa9.39□□□□□ -0.91
CDKN3-203ENST00000395577 ESYT1Q9BSJ8 1104 aa9.39□□□□□ -0.91
CDKN3-203ENST00000395577 PSMA6P60900 246 aaKnown RBP9.38□□□□□ -0.91
CDKN3-203ENST00000395577 STAG2Q8N3U4 1231 aa9.38□□□□□ -0.91
CDKN3-203ENST00000395577 ITPKCQ96DU7 683 aa9.38□□□□□ -0.91
CDKN3-203ENST00000395577 C2orf49Q9BVC5 232 aaPredicted RBP9.38□□□□□ -0.91
CDKN3-203ENST00000395577 PRKD2Q9BZL6 878 aa9.38□□□□□ -0.91
CDKN3-203ENST00000395577 A0A0G2JS52 829 aa9.37□□□□□ -0.91
CDKN3-203ENST00000395577 RBM47A0AV96 593 aaKnown RBP9.37□□□□□ -0.91
CDKN3-203ENST00000395577 TTC24A2A3L6 582 aaPredicted RBP9.37□□□□□ -0.91
CDKN3-203ENST00000395577 ANKRD33BA6NCL7 494 aa9.37□□□□□ -0.91
CDKN3-203ENST00000395577 CDK2AP1O14519 115 aa9.37□□□□□ -0.91
CDKN3-203ENST00000395577 ZIC2O95409 532 aaPredicted RBP9.37□□□□□ -0.91
CDKN3-203ENST00000395577 MAPK1P28482 360 aa9.37□□□□□ -0.91
CDKN3-203ENST00000395577 WDR4P57081 412 aaKnown RBP9.37□□□□□ -0.91
CDKN3-203ENST00000395577 ARHGAP4P98171 946 aa9.37□□□□□ -0.91
CDKN3-203ENST00000395577 CLN3Q13286 438 aa9.37□□□□□ -0.91
CDKN3-203ENST00000395577 C16orf46Q6P387 395 aa9.37□□□□□ -0.91
CDKN3-203ENST00000395577 Q6ZVU0 165 aa9.37□□□□□ -0.91
CDKN3-203ENST00000395577 KDF1Q8NAX2 398 aaPredicted RBP9.37□□□□□ -0.91
CDKN3-203ENST00000395577 SAP130Q9H0E3 1048 aa9.37□□□□□ -0.91
CDKN3-203ENST00000395577 DCTN4Q9UJW0 460 aa9.37□□□□□ -0.91
CDKN3-203ENST00000395577 CHMP3Q9Y3E7 222 aa9.37□□□□□ -0.91
CDKN3-203ENST00000395577 HRH3Q9Y5N1 445 aa9.37□□□□□ -0.91
CDKN3-203ENST00000395577 USP3Q9Y6I4 520 aa9.37□□□□□ -0.91
CDKN3-203ENST00000395577 J3QL48 77 aa9.36□□□□□ -0.91
CDKN3-203ENST00000395577 FAM13AO94988 1023 aa9.36□□□□□ -0.91
CDKN3-203ENST00000395577 PTGIRP43119 386 aa9.36□□□□□ -0.91
CDKN3-203ENST00000395577 CYP4X1Q8N118 509 aa9.36□□□□□ -0.91
CDKN3-203ENST00000395577 AGBL1Q96MI9 1066 aa9.36□□□□□ -0.91
CDKN3-203ENST00000395577 PLA2G2EQ9NZK7 142 aa9.36□□□□□ -0.91
CDKN3-203ENST00000395577 V9GY48 417 aaPredicted RBP9.36□□□□□ -0.91
CDKN3-203ENST00000395577 MEN1O00255 615 aa9.35□□□□□ -0.91
CDKN3-203ENST00000395577 NPR3P17342 541 aa9.35□□□□□ -0.91
CDKN3-203ENST00000395577 CENPCQ03188 943 aa9.35□□□□□ -0.91
CDKN3-203ENST00000395577 NBPF15Q8N660 670 aa9.35□□□□□ -0.91
CDKN3-203ENST00000395577 NLRP3Q96P20 1036 aa9.35□□□□□ -0.91
CDKN3-203ENST00000395577 KLF16Q9BXK1 252 aaPredicted RBP9.35□□□□□ -0.91
CDKN3-203ENST00000395577 BCL2L13Q9BXK5 485 aa9.35□□□□□ -0.91
CDKN3-203ENST00000395577 ZFAND3Q9H8U3 227 aa9.35□□□□□ -0.91
CDKN3-203ENST00000395577 IQSEC3Q9UPP2 1182 aaPredicted RBP9.35□□□□□ -0.91
CDKN3-203ENST00000395577 MPSTP25325 297 aa9.34□□□□□ -0.91
CDKN3-203ENST00000395577 RELBQ01201 579 aa9.34□□□□□ -0.91
CDKN3-203ENST00000395577 NPAS4Q8IUM7 802 aa9.34□□□□□ -0.91
CDKN3-203ENST00000395577 GDF9O60383 454 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms